RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 C2orf72A6NCS6 295 aa21.15■□□□□ 0.98
COL27A1-208ENST00000494780 PRAMEF25A6NGN4 478 aa21.15■□□□□ 0.98
COL27A1-208ENST00000494780 PPP6CO00743 305 aa21.15■□□□□ 0.98
COL27A1-208ENST00000494780 UGT2B11O75310 529 aa21.15■□□□□ 0.98
COL27A1-208ENST00000494780 TMIGD3P0DMS9 266 aaPredicted RBP21.15■□□□□ 0.98
COL27A1-208ENST00000494780 EMDP50402 254 aa21.15■□□□□ 0.98
COL27A1-208ENST00000494780 CDH13P55290 713 aa21.15■□□□□ 0.98
COL27A1-208ENST00000494780 DUSP2Q05923 314 aa21.15■□□□□ 0.98
COL27A1-208ENST00000494780 FBXW10Q5XX13 1052 aa21.15■□□□□ 0.98
COL27A1-208ENST00000494780 C1orf52Q8N6N3 182 aaKnown RBP21.15■□□□□ 0.98
COL27A1-208ENST00000494780 WDSUB1Q8N9V3 476 aa21.15■□□□□ 0.98
COL27A1-208ENST00000494780 CNRIP1Q96F85 164 aaPredicted RBP21.15■□□□□ 0.98
COL27A1-208ENST00000494780 ZFP3Q96NJ6 502 aa21.15■□□□□ 0.98
COL27A1-208ENST00000494780 ZNF180Q9UJW8 692 aa21.15■□□□□ 0.98
COL27A1-208ENST00000494780 FRG2CA6NGY1 282 aa21.14■□□□□ 0.97
COL27A1-208ENST00000494780 A8MT66 165 aa21.14■□□□□ 0.97
COL27A1-208ENST00000494780 BCAS2O75934 225 aaPredicted RBP21.14■□□□□ 0.97
COL27A1-208ENST00000494780 SBK3P0C264 359 aa21.14■□□□□ 0.97
COL27A1-208ENST00000494780 PCSK2P16519 638 aa21.14■□□□□ 0.97
COL27A1-208ENST00000494780 TSPAN8P19075 237 aa21.14■□□□□ 0.97
COL27A1-208ENST00000494780 ALDH9A1P49189 494 aa21.14■□□□□ 0.97
COL27A1-208ENST00000494780 LTB4RQ15722 352 aa21.14■□□□□ 0.97
COL27A1-208ENST00000494780 ENPP6Q6UWR7 440 aa21.14■□□□□ 0.97
COL27A1-208ENST00000494780 OR14L1PQ8NHC6 308 aa21.14■□□□□ 0.97
COL27A1-208ENST00000494780 LINC01560Q8TB33 94 aa21.14■□□□□ 0.97
COL27A1-208ENST00000494780 ZNF675Q8TD23 568 aa21.14■□□□□ 0.97
COL27A1-208ENST00000494780 TMCO6Q96DC7 493 aa21.14■□□□□ 0.97
COL27A1-208ENST00000494780 UCN2Q96RP3 112 aa21.14■□□□□ 0.97
COL27A1-208ENST00000494780 TM9SF2Q99805 663 aa21.14■□□□□ 0.97
COL27A1-208ENST00000494780 TUBA1CQ9BQE3 449 aa21.14■□□□□ 0.97
COL27A1-208ENST00000494780 SFXN3Q9BWM7 321 aa21.14■□□□□ 0.97
COL27A1-208ENST00000494780 EHD3Q9NZN3 535 aa21.14■□□□□ 0.97
COL27A1-208ENST00000494780 VPS29Q9UBQ0 182 aa21.14■□□□□ 0.97
COL27A1-208ENST00000494780 ZNF225Q9UK10 706 aa21.14■□□□□ 0.97
COL27A1-208ENST00000494780 UTS2RQ9UKP6 389 aa21.14■□□□□ 0.97
COL27A1-208ENST00000494780 GPR55Q9Y2T6 319 aaPredicted RBP21.14■□□□□ 0.97
COL27A1-208ENST00000494780 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.14■□□□□ 0.97
COL27A1-208ENST00000494780 DOCK7Q96N67 2140 aa21.14■□□□□ 0.97
COL27A1-208ENST00000494780 OR6C70A6NIJ9 312 aa21.13■□□□□ 0.97
COL27A1-208ENST00000494780 TRIM49D1C9J1S8 452 aa21.13■□□□□ 0.97
COL27A1-208ENST00000494780 ABCB7O75027 752 aa21.13■□□□□ 0.97
COL27A1-208ENST00000494780 ERN1O75460 977 aaKnown RBP21.13■□□□□ 0.97
COL27A1-208ENST00000494780 RAF1P04049 648 aa21.13■□□□□ 0.97
COL27A1-208ENST00000494780 HSD3B1P14060 373 aa21.13■□□□□ 0.97
COL27A1-208ENST00000494780 HSD3B2P26439 372 aa21.13■□□□□ 0.97
COL27A1-208ENST00000494780 SLCO1A2P46721 670 aa21.13■□□□□ 0.97
COL27A1-208ENST00000494780 MRPS35P82673 323 aaKnown RBP21.13■□□□□ 0.97
COL27A1-208ENST00000494780 ADGRE4PQ86SQ3 457 aa21.13■□□□□ 0.97
COL27A1-208ENST00000494780 TRIM42Q8IWZ5 723 aa21.13■□□□□ 0.97
COL27A1-208ENST00000494780 TMEM151AQ8N4L1 468 aa21.13■□□□□ 0.97
COL27A1-208ENST00000494780 ERP27Q96DN0 273 aa21.13■□□□□ 0.97
COL27A1-208ENST00000494780 DTNBP1Q96EV8 351 aa21.13■□□□□ 0.97
COL27A1-208ENST00000494780 COL21A1Q96P44 957 aa21.13■□□□□ 0.97
COL27A1-208ENST00000494780 MCM8Q9UJA3 840 aa21.13■□□□□ 0.97
COL27A1-208ENST00000494780 HRNRQ86YZ3 2850 aaPredicted RBP21.13■□□□□ 0.97
COL27A1-208ENST00000494780 POC1B-GALNT4F8VUJ3 575 aa21.12■□□□□ 0.97
COL27A1-208ENST00000494780 H0Y3Z8 333 aa21.12■□□□□ 0.97
COL27A1-208ENST00000494780 REM1O75628 298 aa21.12■□□□□ 0.97
COL27A1-208ENST00000494780 OR4F21O95013 312 aa21.12■□□□□ 0.97
COL27A1-208ENST00000494780 RCBTB2O95199 551 aa21.12■□□□□ 0.97
COL27A1-208ENST00000494780 ESRRBO95718 433 aa21.12■□□□□ 0.97
COL27A1-208ENST00000494780 KRT6AP02538 564 aa21.12■□□□□ 0.97
COL27A1-208ENST00000494780 KRT6BP04259 564 aa21.12■□□□□ 0.97
COL27A1-208ENST00000494780 HSD17B3P37058 310 aa21.12■□□□□ 0.97
COL27A1-208ENST00000494780 KRT6CP48668 564 aa21.12■□□□□ 0.97
COL27A1-208ENST00000494780 HMGCS1Q01581 520 aa21.12■□□□□ 0.97
COL27A1-208ENST00000494780 CLCQ05315 142 aa21.12■□□□□ 0.97
COL27A1-208ENST00000494780 FOXF2Q12947 444 aa21.12■□□□□ 0.97
COL27A1-208ENST00000494780 FOXD4Q12950 439 aaPredicted RBP21.12■□□□□ 0.97
COL27A1-208ENST00000494780 ZNF628Q5EBL2 1059 aa21.12■□□□□ 0.97
COL27A1-208ENST00000494780 FAM180BQ6P0A1 224 aa21.12■□□□□ 0.97
COL27A1-208ENST00000494780 SCIMPQ6UWF3 145 aa21.12■□□□□ 0.97
COL27A1-208ENST00000494780 IFNEQ86WN2 208 aa21.12■□□□□ 0.97
COL27A1-208ENST00000494780 PLCZ1Q86YW0 608 aa21.12■□□□□ 0.97
COL27A1-208ENST00000494780 DCAKDQ8WVC6 231 aa21.12■□□□□ 0.97
COL27A1-208ENST00000494780 WNT2BQ93097 391 aa21.12■□□□□ 0.97
COL27A1-208ENST00000494780 TMBIM1Q969X1 311 aa21.12■□□□□ 0.97
COL27A1-208ENST00000494780 SLC35A4Q96G79 324 aa21.12■□□□□ 0.97
COL27A1-208ENST00000494780 BTBD9Q96Q07 612 aa21.12■□□□□ 0.97
COL27A1-208ENST00000494780 HBEGFQ99075 208 aa21.12■□□□□ 0.97
COL27A1-208ENST00000494780 FMO2Q99518 471 aa21.12■□□□□ 0.97
COL27A1-208ENST00000494780 RBM24Q9BX46 236 aaKnown RBP21.12■□□□□ 0.97
COL27A1-208ENST00000494780 PFDN4Q9NQP4 134 aa21.12■□□□□ 0.97
COL27A1-208ENST00000494780 HEY2Q9UBP5 337 aa21.12■□□□□ 0.97
COL27A1-208ENST00000494780 MPDZO75970 2070 aa21.12■□□□□ 0.97
COL27A1-208ENST00000494780 ACANP16112 2415 aa21.12■□□□□ 0.97
COL27A1-208ENST00000494780 MANBAO00462 879 aa21.11■□□□□ 0.97
COL27A1-208ENST00000494780 ATE1O95260 518 aa21.11■□□□□ 0.97
COL27A1-208ENST00000494780 DRD2P14416 443 aa21.11■□□□□ 0.97
COL27A1-208ENST00000494780 FOSL1P15407 271 aa21.11■□□□□ 0.97
COL27A1-208ENST00000494780 SRD5A2P31213 254 aa21.11■□□□□ 0.97
COL27A1-208ENST00000494780 GFRA1P56159 465 aa21.11■□□□□ 0.97
COL27A1-208ENST00000494780 PSPHP78330 225 aa21.11■□□□□ 0.97
COL27A1-208ENST00000494780 SRYQ05066 204 aa21.11■□□□□ 0.97
COL27A1-208ENST00000494780 CSTF3Q12996 717 aaKnown RBP21.11■□□□□ 0.97
COL27A1-208ENST00000494780 RASA2Q15283 850 aa21.11■□□□□ 0.97
COL27A1-208ENST00000494780 CCDC116Q8IYX3 515 aa21.11■□□□□ 0.97
COL27A1-208ENST00000494780 SAMD14Q8IZD0 417 aaPredicted RBP21.11■□□□□ 0.97
COL27A1-208ENST00000494780 CDYL2Q8N8U2 506 aa21.11■□□□□ 0.97
COL27A1-208ENST00000494780 RDH11Q8TC12 318 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms