RNA–Protein interactions for RNA: ENST00000494486.1

TRIM59-206, Transcript of tripartite motif containing 59, humanhuman

TSL 3

Gene TRIM59, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-206ENST00000494486 MAPKAP1Q9BPZ7 522 aa9.67□□□□□ -0.86
TRIM59-206ENST00000494486 ROGDIQ9GZN7 287 aa9.67□□□□□ -0.86
TRIM59-206ENST00000494486 NTN4Q9HB63 628 aa9.67□□□□□ -0.86
TRIM59-206ENST00000494486 EFR3BQ9Y2G0 817 aa9.67□□□□□ -0.86
TRIM59-206ENST00000494486 DYRK1BQ9Y463 629 aa9.67□□□□□ -0.86
TRIM59-206ENST00000494486 NPIPA5A0A0B4J1W7 369 aa9.66□□□□□ -0.86
TRIM59-206ENST00000494486 PRAMEF25A6NGN4 478 aa9.66□□□□□ -0.86
TRIM59-206ENST00000494486 EFCAB8A8MWE9 144 aa9.66□□□□□ -0.86
TRIM59-206ENST00000494486 NPIPA7E9PJI5 369 aa9.66□□□□□ -0.86
TRIM59-206ENST00000494486 H2AFYO75367 372 aaKnown RBP9.66□□□□□ -0.86
TRIM59-206ENST00000494486 CLEC3AO75596 197 aa9.66□□□□□ -0.86
TRIM59-206ENST00000494486 DHRS4L1P0CG22 281 aa9.66□□□□□ -0.86
TRIM59-206ENST00000494486 NPIPA8P0DM63 369 aa9.66□□□□□ -0.86
TRIM59-206ENST00000494486 TCEA1P23193 301 aaKnown RBP9.66□□□□□ -0.86
TRIM59-206ENST00000494486 GALNSP34059 522 aa9.66□□□□□ -0.86
TRIM59-206ENST00000494486 DSCR4P56555 118 aaPredicted RBP9.66□□□□□ -0.86
TRIM59-206ENST00000494486 MYL5Q02045 173 aa9.66□□□□□ -0.86
TRIM59-206ENST00000494486 KLF1Q13351 362 aaPredicted RBP9.66□□□□□ -0.86
TRIM59-206ENST00000494486 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.66□□□□□ -0.86
TRIM59-206ENST00000494486 TMEM108Q6UXF1 575 aa9.66□□□□□ -0.86
TRIM59-206ENST00000494486 TMPRSS11BQ86T26 416 aa9.66□□□□□ -0.86
TRIM59-206ENST00000494486 FAM71DQ8N9W8 422 aa9.66□□□□□ -0.86
TRIM59-206ENST00000494486 SYT14Q8NB59 555 aa9.66□□□□□ -0.86
TRIM59-206ENST00000494486 ADCY4Q8NFM4 1077 aa9.66□□□□□ -0.86
TRIM59-206ENST00000494486 TANKQ92844 425 aa9.66□□□□□ -0.86
TRIM59-206ENST00000494486 TMEM186Q96B77 213 aa9.66□□□□□ -0.86
TRIM59-206ENST00000494486 SORCS2Q96PQ0 1159 aa9.66□□□□□ -0.86
TRIM59-206ENST00000494486 FAM118BQ9BPY3 351 aa9.66□□□□□ -0.86
TRIM59-206ENST00000494486 C12orf49Q9H741 205 aa9.66□□□□□ -0.86
TRIM59-206ENST00000494486 PRDM7Q9NQW5 492 aa9.66□□□□□ -0.86
TRIM59-206ENST00000494486 HIF1ANQ9NWT6 349 aa9.66□□□□□ -0.86
TRIM59-206ENST00000494486 ZNF337Q9Y3M9 751 aa9.66□□□□□ -0.86
TRIM59-206ENST00000494486 VAPBO95292 243 aa9.65□□□□□ -0.86
TRIM59-206ENST00000494486 STAMBPO95630 424 aa9.65□□□□□ -0.86
TRIM59-206ENST00000494486 TUBBP07437 444 aa9.65□□□□□ -0.86
TRIM59-206ENST00000494486 NUDT17P0C025 328 aa9.65□□□□□ -0.86
TRIM59-206ENST00000494486 OGNP20774 298 aaKnown RBP9.65□□□□□ -0.86
TRIM59-206ENST00000494486 CPN2P22792 545 aa9.65□□□□□ -0.86
TRIM59-206ENST00000494486 PTAFRP25105 342 aa9.65□□□□□ -0.86
TRIM59-206ENST00000494486 APOBEC3AP31941 199 aaPredicted RBP9.65□□□□□ -0.86
TRIM59-206ENST00000494486 GRIA1P42261 906 aa9.65□□□□□ -0.86
TRIM59-206ENST00000494486 SLC6A8P48029 635 aa9.65□□□□□ -0.86
TRIM59-206ENST00000494486 CLDN20P56880 219 aa9.65□□□□□ -0.86
TRIM59-206ENST00000494486 COPS2P61201 443 aa9.65□□□□□ -0.86
TRIM59-206ENST00000494486 UBE2HP62256 183 aa9.65□□□□□ -0.86
TRIM59-206ENST00000494486 HMGCS1Q01581 520 aa9.65□□□□□ -0.86
TRIM59-206ENST00000494486 DHX9Q08211 1270 aaKnown RBP9.65□□□□□ -0.86
TRIM59-206ENST00000494486 ITGADQ13349 1161 aa9.65□□□□□ -0.86
TRIM59-206ENST00000494486 UGT3A1Q6NUS8 523 aa9.65□□□□□ -0.86
TRIM59-206ENST00000494486 ZNF549Q6P9A3 640 aa9.65□□□□□ -0.86
TRIM59-206ENST00000494486 BHLHA15Q7RTS1 189 aaPredicted RBP9.65□□□□□ -0.86
TRIM59-206ENST00000494486 REC114Q7Z4M0 266 aa9.65□□□□□ -0.86
TRIM59-206ENST00000494486 CPNE9Q8IYJ1 553 aa9.65□□□□□ -0.86
TRIM59-206ENST00000494486 BPIFB2Q8N4F0 458 aa9.65□□□□□ -0.86
TRIM59-206ENST00000494486 PIP4P2Q8N4L2 257 aa9.65□□□□□ -0.86
TRIM59-206ENST00000494486 SNX18Q96RF0 628 aa9.65□□□□□ -0.86
TRIM59-206ENST00000494486 NDNQ99608 321 aa9.65□□□□□ -0.86
TRIM59-206ENST00000494486 SLC6A7Q99884 636 aa9.65□□□□□ -0.86
TRIM59-206ENST00000494486 INPP5KQ9BT40 448 aa9.65□□□□□ -0.86
TRIM59-206ENST00000494486 CCDC68Q9H2F9 335 aa9.65□□□□□ -0.86
TRIM59-206ENST00000494486 ACSS1Q9NUB1 689 aaPredicted RBP9.65□□□□□ -0.86
TRIM59-206ENST00000494486 INTS10Q9NVR2 710 aaKnown RBP9.65□□□□□ -0.86
TRIM59-206ENST00000494486 PDP1Q9P0J1 537 aaPredicted RBP9.65□□□□□ -0.86
TRIM59-206ENST00000494486 MED16Q9Y2X0 877 aa9.65□□□□□ -0.86
TRIM59-206ENST00000494486 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.65□□□□□ -0.86
TRIM59-206ENST00000494486 KCNE2Q9Y6J6 123 aa9.65□□□□□ -0.86
TRIM59-206ENST00000494486 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.64□□□□□ -0.87
TRIM59-206ENST00000494486 ANKDD1BA6NHY2 528 aa9.64□□□□□ -0.87
TRIM59-206ENST00000494486 ADAP00813 363 aa9.64□□□□□ -0.87
TRIM59-206ENST00000494486 ARNTP27540 789 aa9.64□□□□□ -0.87
TRIM59-206ENST00000494486 NMBRP28336 390 aa9.64□□□□□ -0.87
TRIM59-206ENST00000494486 SSTR4P31391 388 aa9.64□□□□□ -0.87
TRIM59-206ENST00000494486 AP1S2P56377 157 aa9.64□□□□□ -0.87
TRIM59-206ENST00000494486 RAET1LQ5VY80 246 aa9.64□□□□□ -0.87
TRIM59-206ENST00000494486 GTF2IRD2BQ6EKJ0 949 aa9.64□□□□□ -0.87
TRIM59-206ENST00000494486 DESI1Q6ICB0 168 aa9.64□□□□□ -0.87
TRIM59-206ENST00000494486 PPP4R4Q6NUP7 873 aa9.64□□□□□ -0.87
TRIM59-206ENST00000494486 TMIGD1Q6UXZ0 262 aa9.64□□□□□ -0.87
TRIM59-206ENST00000494486 B3GLCTQ6Y288 498 aa9.64□□□□□ -0.87
TRIM59-206ENST00000494486 GTF2IRD2Q86UP8 949 aa9.64□□□□□ -0.87
TRIM59-206ENST00000494486 P2RY8Q86VZ1 359 aa9.64□□□□□ -0.87
TRIM59-206ENST00000494486 SPNS2Q8IVW8 549 aa9.64□□□□□ -0.87
TRIM59-206ENST00000494486 SRFBP1Q8NEF9 429 aaKnown RBP9.64□□□□□ -0.87
TRIM59-206ENST00000494486 CD200R1Q8TD46 325 aa9.64□□□□□ -0.87
TRIM59-206ENST00000494486 UBE2FQ969M7 185 aa9.64□□□□□ -0.87
TRIM59-206ENST00000494486 ZBTB8AQ96BR9 441 aa9.64□□□□□ -0.87
TRIM59-206ENST00000494486 FBXL8Q96CD0 374 aa9.64□□□□□ -0.87
TRIM59-206ENST00000494486 TMCO6Q96DC7 493 aa9.64□□□□□ -0.87
TRIM59-206ENST00000494486 VPS39Q96JC1 886 aa9.64□□□□□ -0.87
TRIM59-206ENST00000494486 KCNC2Q96PR1 638 aa9.64□□□□□ -0.87
TRIM59-206ENST00000494486 GPR21Q99679 349 aa9.64□□□□□ -0.87
TRIM59-206ENST00000494486 RSPO3Q9BXY4 272 aaPredicted RBP9.64□□□□□ -0.87
TRIM59-206ENST00000494486 DDX47Q9H0S4 455 aaKnown RBP9.64□□□□□ -0.87
TRIM59-206ENST00000494486 RPF2Q9H7B2 306 aaKnown RBP9.64□□□□□ -0.87
TRIM59-206ENST00000494486 ZMAT3Q9HA38 289 aaKnown RBP9.64□□□□□ -0.87
TRIM59-206ENST00000494486 PAQR5Q9NXK6 330 aaPredicted RBP9.64□□□□□ -0.87
TRIM59-206ENST00000494486 KLHL21Q9UJP4 597 aa9.64□□□□□ -0.87
TRIM59-206ENST00000494486 MCTS1Q9ULC4 181 aaKnown RBP9.64□□□□□ -0.87
TRIM59-206ENST00000494486 CORO1CQ9ULV4 474 aaPredicted RBP9.64□□□□□ -0.87
TRIM59-206ENST00000494486 PPIAL4AQ9Y536 164 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms