RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 SPIN4Q56A73 249 aa7.8□□□□□ -1.16
LRCH3-219ENST00000494069 SPDYAQ5MJ70 313 aa7.8□□□□□ -1.16
LRCH3-219ENST00000494069 WIPI1Q5MNZ9 446 aaPredicted RBP7.8□□□□□ -1.16
LRCH3-219ENST00000494069 DCST1Q5T197 706 aa7.8□□□□□ -1.16
LRCH3-219ENST00000494069 CLEC6AQ6EIG7 209 aa7.8□□□□□ -1.16
LRCH3-219ENST00000494069 GALNT18Q6P9A2 607 aa7.8□□□□□ -1.16
LRCH3-219ENST00000494069 NPSR1Q6W5P4 371 aa7.8□□□□□ -1.16
LRCH3-219ENST00000494069 FRMD7Q6ZUT3 714 aa7.8□□□□□ -1.16
LRCH3-219ENST00000494069 ACAD11Q709F0 780 aa7.8□□□□□ -1.16
LRCH3-219ENST00000494069 YRDCQ86U90 279 aaKnown RBP7.8□□□□□ -1.16
LRCH3-219ENST00000494069 ULK2Q8IYT8 1036 aa7.8□□□□□ -1.16
LRCH3-219ENST00000494069 LIX1Q8N485 282 aa7.8□□□□□ -1.16
LRCH3-219ENST00000494069 CCDC63Q8NA47 563 aa7.8□□□□□ -1.16
LRCH3-219ENST00000494069 NAXEQ8NCW5 288 aa7.8□□□□□ -1.16
LRCH3-219ENST00000494069 C17orf47Q8NEP4 570 aa7.8□□□□□ -1.16
LRCH3-219ENST00000494069 OR7G2Q8NG99 324 aa7.8□□□□□ -1.16
LRCH3-219ENST00000494069 OR4N2Q8NGD1 307 aa7.8□□□□□ -1.16
LRCH3-219ENST00000494069 CDC26Q8NHZ8 85 aa7.8□□□□□ -1.16
LRCH3-219ENST00000494069 TMBIM1Q969X1 311 aa7.8□□□□□ -1.16
LRCH3-219ENST00000494069 LCORQ96JN0 433 aaPredicted RBP7.8□□□□□ -1.16
LRCH3-219ENST00000494069 TIMP4Q99727 224 aa7.8□□□□□ -1.16
LRCH3-219ENST00000494069 METTL7AQ9H8H3 244 aa7.8□□□□□ -1.16
LRCH3-219ENST00000494069 ANKZF1Q9H8Y5 726 aa7.8□□□□□ -1.16
LRCH3-219ENST00000494069 L2HGDHQ9H9P8 463 aa7.8□□□□□ -1.16
LRCH3-219ENST00000494069 SLC35C2Q9NQQ7 365 aa7.8□□□□□ -1.16
LRCH3-219ENST00000494069 QPCTLQ9NXS2 382 aa7.8□□□□□ -1.16
LRCH3-219ENST00000494069 C15orf41Q9Y2V0 281 aa7.8□□□□□ -1.16
LRCH3-219ENST00000494069 CCL27Q9Y4X3 112 aa7.8□□□□□ -1.16
LRCH3-219ENST00000494069 POLR3HQ9Y535 204 aaPredicted RBP7.8□□□□□ -1.16
LRCH3-219ENST00000494069 OTOGQ6ZRI0 2925 aa7.8□□□□□ -1.16
LRCH3-219ENST00000494069 HCFC1P51610 2035 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 EXPH5Q8NEV8 1989 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 KIAA1549Q9HCM3 1950 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 INTS1Q8N201 2190 aaKnown RBP7.79□□□□□ -1.16
LRCH3-219ENST00000494069 TLDC2A0PJX2 215 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 SERTM1A2A2V5 107 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 ENO4A6NNW6 628 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 TO15178 435 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 WDR1O75083 606 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 ICOSLGO75144 302 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 REM1O75628 298 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 JUNP05412 331 aaKnown RBP7.79□□□□□ -1.16
LRCH3-219ENST00000494069 HPNP05981 417 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 CT45A8P0DMV1 189 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 CT45A9P0DMV2 189 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 DRD2P14416 443 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 NAGAP17050 411 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 BMP7P18075 431 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 TACR1P25103 407 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 MSX1P28360 303 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 CRHR1P34998 444 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 PPICP45877 212 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 MASP1P48740 699 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 TMED10P49755 219 aaKnown RBP7.79□□□□□ -1.16
LRCH3-219ENST00000494069 DNAJB13P59910 316 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 TLE4Q04727 773 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 SLC18A2Q05940 514 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 PLCXD2Q0VAA5 305 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 HEPACAMQ14CZ8 416 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 CT45A2Q5DJT8 189 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 CFAP157Q5JU67 520 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 TBCELQ5QJ74 424 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 TIGD3Q6B0B8 471 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 OR5M10Q6IEU7 315 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 FAM71E1Q6IPT2 247 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 ANKRD26P1Q6NSI1 321 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 PLXDC2Q6UX71 529 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 ANGPTL8Q6UXH0 198 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 NUP54Q7Z3B4 507 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 TRIM46Q7Z4K8 759 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 WDR53Q7Z5U6 358 aaPredicted RBP7.79□□□□□ -1.16
LRCH3-219ENST00000494069 TDRPQ86YL5 185 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 C10orf107Q8IVU9 208 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 EIF1ADQ8N9N8 165 aaKnown RBP7.79□□□□□ -1.16
LRCH3-219ENST00000494069 WDSUB1Q8N9V3 476 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 FAM83FQ8NEG4 500 aaPredicted RBP7.79□□□□□ -1.16
LRCH3-219ENST00000494069 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.79□□□□□ -1.16
LRCH3-219ENST00000494069 RDH11Q8TC12 318 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 ZNF675Q8TD23 568 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 HSPBAP1Q96EW2 488 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 TMEM41AQ96HV5 264 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 EGLN2Q96KS0 407 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 VSTM2LQ96N03 204 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 SECISBP2Q96T21 854 aaKnown RBP7.79□□□□□ -1.16
LRCH3-219ENST00000494069 GATA5Q9BWX5 397 aaPredicted RBP7.79□□□□□ -1.16
LRCH3-219ENST00000494069 UGT2B28Q9BY64 529 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 KCNJ16Q9NPI9 418 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 SERHLQ9NQF3 203 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 OXSMQ9NWU1 459 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 SIRT5Q9NXA8 310 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 B4GALT7Q9UBV7 327 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 PRODH2Q9UF12 536 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 ITGB1BP2Q9UKP3 347 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 GRID1Q9ULK0 1009 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 MAPRE3Q9UPY8 281 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 CFL2Q9Y281 166 aa7.79□□□□□ -1.16
LRCH3-219ENST00000494069 GPR55Q9Y2T6 319 aaPredicted RBP7.79□□□□□ -1.16
LRCH3-219ENST00000494069 PRAMEF25A6NGN4 478 aa7.78□□□□□ -1.16
LRCH3-219ENST00000494069 FRG2CA6NGY1 282 aa7.78□□□□□ -1.16
LRCH3-219ENST00000494069 MYO1GB0I1T2 1018 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms