RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 TSFMP43897 325 aaKnown RBP12.97□□□□□ -0.33
VCP-207ENST00000493886 SYPL1Q16563 259 aa12.97□□□□□ -0.33
VCP-207ENST00000493886 ALG11Q2TAA5 492 aa12.97□□□□□ -0.33
VCP-207ENST00000493886 ZNF750Q32MQ0 723 aa12.97□□□□□ -0.33
VCP-207ENST00000493886 PRRT3Q5FWE3 981 aa12.97□□□□□ -0.33
VCP-207ENST00000493886 VN1R4Q7Z5H5 301 aa12.97□□□□□ -0.33
VCP-207ENST00000493886 SLC51BQ86UW2 128 aa12.97□□□□□ -0.33
VCP-207ENST00000493886 STX19Q8N4C7 294 aa12.97□□□□□ -0.33
VCP-207ENST00000493886 OR5D16Q8NGK9 328 aa12.97□□□□□ -0.33
VCP-207ENST00000493886 XAGE5Q8WWM1 108 aa12.97□□□□□ -0.33
VCP-207ENST00000493886 CNRIP1Q96F85 164 aaPredicted RBP12.97□□□□□ -0.33
VCP-207ENST00000493886 FCRL4Q96PJ5 515 aa12.97□□□□□ -0.33
VCP-207ENST00000493886 TRPC4Q9UBN4 977 aa12.97□□□□□ -0.33
VCP-207ENST00000493886 MMP17Q9ULZ9 603 aa12.97□□□□□ -0.33
VCP-207ENST00000493886 PRAMEF27A3QJZ7 478 aa12.96□□□□□ -0.33
VCP-207ENST00000493886 ALPPL2P10696 532 aa12.96□□□□□ -0.33
VCP-207ENST00000493886 GGT2P36268 569 aa12.96□□□□□ -0.33
VCP-207ENST00000493886 PXNP49023 591 aaPredicted RBP12.96□□□□□ -0.33
VCP-207ENST00000493886 LIM2P55344 173 aa12.96□□□□□ -0.33
VCP-207ENST00000493886 RPS15AP62244 130 aaKnown RBP12.96□□□□□ -0.33
VCP-207ENST00000493886 YPEL5P62699 121 aa12.96□□□□□ -0.33
VCP-207ENST00000493886 CCDC116Q8IYX3 515 aa12.96□□□□□ -0.33
VCP-207ENST00000493886 DNAJC22Q8N4W6 341 aa12.96□□□□□ -0.33
VCP-207ENST00000493886 RHOXF1Q8NHV9 184 aa12.96□□□□□ -0.33
VCP-207ENST00000493886 SUN3Q8TAQ9 357 aa12.96□□□□□ -0.33
VCP-207ENST00000493886 ZNF675Q8TD23 568 aa12.96□□□□□ -0.33
VCP-207ENST00000493886 HMGB4Q8WW32 186 aa12.96□□□□□ -0.33
VCP-207ENST00000493886 SLC22A18Q96BI1 424 aa12.96□□□□□ -0.33
VCP-207ENST00000493886 ZNF607Q96SK3 696 aa12.96□□□□□ -0.33
VCP-207ENST00000493886 IMPAD1Q9NX62 359 aa12.96□□□□□ -0.33
VCP-207ENST00000493886 CES1P1Q9UKY3 287 aa12.96□□□□□ -0.33
VCP-207ENST00000493886 DUSP12Q9UNI6 340 aa12.96□□□□□ -0.33
VCP-207ENST00000493886 ENTPD4Q9Y227 616 aa12.96□□□□□ -0.33
VCP-207ENST00000493886 HCN4Q9Y3Q4 1203 aa12.96□□□□□ -0.33
VCP-207ENST00000493886 SPTBN5Q9NRC6 3674 aaKnown RBP12.96□□□□□ -0.33
VCP-207ENST00000493886 CCNB2O95067 398 aa12.96□□□□□ -0.33
VCP-207ENST00000493886 ALOX12P18054 663 aa12.96□□□□□ -0.33
VCP-207ENST00000493886 PRKAG1P54619 331 aa12.96□□□□□ -0.33
VCP-207ENST00000493886 DUSP2Q05923 314 aa12.96□□□□□ -0.33
VCP-207ENST00000493886 TGM3Q08188 693 aa12.96□□□□□ -0.33
VCP-207ENST00000493886 ST3GAL4Q11206 333 aa12.96□□□□□ -0.33
VCP-207ENST00000493886 GPR19Q15760 415 aa12.96□□□□□ -0.33
VCP-207ENST00000493886 FBXO43Q4G163 708 aa12.96□□□□□ -0.33
VCP-207ENST00000493886 STEAP3Q658P3 488 aa12.96□□□□□ -0.33
VCP-207ENST00000493886 SLC48A1Q6P1K1 146 aa12.96□□□□□ -0.33
VCP-207ENST00000493886 TMEM64Q6YI46 380 aa12.96□□□□□ -0.33
VCP-207ENST00000493886 NRROSQ86YC3 692 aa12.96□□□□□ -0.33
VCP-207ENST00000493886 KCT2Q8NC54 265 aa12.96□□□□□ -0.33
VCP-207ENST00000493886 IPCEF1Q8WWN9 437 aaPredicted RBP12.96□□□□□ -0.33
VCP-207ENST00000493886 COL21A1Q96P44 957 aa12.96□□□□□ -0.33
VCP-207ENST00000493886 SIGLEC11Q96RL6 698 aa12.96□□□□□ -0.33
VCP-207ENST00000493886 TREX2Q9BQ50 279 aaPredicted RBP12.96□□□□□ -0.33
VCP-207ENST00000493886 ZNF556Q9HAH1 456 aa12.96□□□□□ -0.33
VCP-207ENST00000493886 SEMA3GQ9NS98 782 aa12.96□□□□□ -0.33
VCP-207ENST00000493886 PSORS1C1Q9UIG5 152 aa12.96□□□□□ -0.33
VCP-207ENST00000493886 KCND3Q9UK17 655 aa12.96□□□□□ -0.33
VCP-207ENST00000493886 FFAR1O14842 300 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 NARSO43776 548 aaKnown RBP12.95□□□□□ -0.34
VCP-207ENST00000493886 SEMA4FO95754 770 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 C8orf89P0DMQ9 161 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 ADORA3P0DMS8 318 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 NR2F1P10589 423 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 SPNP16150 400 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 KCNJ5P48544 419 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 BTN3A2P78410 334 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 CCINQ13939 588 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 KIR2DS3Q14952 304 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 UBE2UQ5VVX9 321 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 Q6ZSR6 202 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 LYSMD2Q8IV50 215 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 TAGAPQ8N103 731 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 FLVCR1-AS1Q8TAF5 88 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 CTRCQ99895 268 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 PSD2Q9BQI7 771 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 SEC14L3Q9UDX4 400 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 ARHGEF17Q96PE2 2063 aaPredicted RBP12.95□□□□□ -0.34
VCP-207ENST00000493886 FANCMQ8IYD8 2048 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 CLDN24A6NM45 220 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 H3BQ06 376 aaPredicted RBP12.95□□□□□ -0.34
VCP-207ENST00000493886 DSCR3O14972 297 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 PROM1O43490 865 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 ADRA2AP08913 450 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 CSNK2A2P19784 350 aaPredicted RBP12.95□□□□□ -0.34
VCP-207ENST00000493886 FEN1P39748 380 aaKnown RBP12.95□□□□□ -0.34
VCP-207ENST00000493886 KHKP50053 298 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 PPP5CP53041 499 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 RGS1Q08116 209 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 MED22Q15528 200 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 AGAP7PQ5VUJ5 663 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 ASPGQ86U10 573 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 SFXN5Q8TD22 340 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 RASSF5Q8WWW0 418 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 GAL3ST3Q96A11 431 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 ZNF354BQ96LW1 612 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 MAPKAP1Q9BPZ7 522 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 BCL7BQ9BQE9 202 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 ZNF226Q9NYT6 803 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 HS3ST3A1Q9Y663 406 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 MTCH2Q9Y6C9 303 aa12.95□□□□□ -0.34
VCP-207ENST00000493886 A0A1W2PS29 197 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms