RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 IFI6P09912 130 aa17.98■□□□□ 0.47
USP39-218ENST00000493829 GPX2P18283 190 aa17.98■□□□□ 0.47
USP39-218ENST00000493829 DSTNP60981 165 aa17.98■□□□□ 0.47
USP39-218ENST00000493829 KCNJ2P63252 427 aa17.98■□□□□ 0.47
USP39-218ENST00000493829 CDC73Q6P1J9 531 aa17.98■□□□□ 0.47
USP39-218ENST00000493829 SLC29A4Q7RTT9 530 aa17.98■□□□□ 0.47
USP39-218ENST00000493829 GALNT10Q86SR1 603 aa17.98■□□□□ 0.47
USP39-218ENST00000493829 CDRT4Q8N9R6 151 aa17.98■□□□□ 0.47
USP39-218ENST00000493829 SNIP1Q8TAD8 396 aaKnown RBP17.98■□□□□ 0.47
USP39-218ENST00000493829 GPR151Q8TDV0 419 aa17.98■□□□□ 0.47
USP39-218ENST00000493829 ADAMTS15Q8TE58 950 aa17.98■□□□□ 0.47
USP39-218ENST00000493829 XAGE5Q8WWM1 108 aa17.98■□□□□ 0.47
USP39-218ENST00000493829 PIK3R3Q92569 461 aa17.98■□□□□ 0.47
USP39-218ENST00000493829 GATA6Q92908 595 aa17.98■□□□□ 0.47
USP39-218ENST00000493829 IMMP1LQ96LU5 166 aa17.98■□□□□ 0.47
USP39-218ENST00000493829 VSTM2LQ96N03 204 aa17.98■□□□□ 0.47
USP39-218ENST00000493829 KCTD14Q9BQ13 255 aaPredicted RBP17.98■□□□□ 0.47
USP39-218ENST00000493829 PRODH2Q9UF12 536 aa17.98■□□□□ 0.47
USP39-218ENST00000493829 PRPF19Q9UMS4 504 aaKnown RBP17.98■□□□□ 0.47
USP39-218ENST00000493829 HMGN4O00479 90 aa17.97■□□□□ 0.47
USP39-218ENST00000493829 ALOX5P09917 674 aa17.97■□□□□ 0.47
USP39-218ENST00000493829 FADDQ13158 208 aa17.97■□□□□ 0.47
USP39-218ENST00000493829 EBPQ15125 230 aaKnown RBP17.97■□□□□ 0.47
USP39-218ENST00000493829 ZNHIT3Q15649 155 aaPredicted RBP17.97■□□□□ 0.47
USP39-218ENST00000493829 EXT1Q16394 746 aa17.97■□□□□ 0.47
USP39-218ENST00000493829 SAMD4BQ5PRF9 694 aaKnown RBP17.97■□□□□ 0.47
USP39-218ENST00000493829 GCNT6Q5T4J0 391 aa17.97■□□□□ 0.47
USP39-218ENST00000493829 NPSR1Q6W5P4 371 aa17.97■□□□□ 0.47
USP39-218ENST00000493829 HSDL2Q6YN16 418 aa17.97■□□□□ 0.47
USP39-218ENST00000493829 C16orf47Q6ZP98 133 aaPredicted RBP17.97■□□□□ 0.47
USP39-218ENST00000493829 OLIG3Q7RTU3 272 aa17.97■□□□□ 0.47
USP39-218ENST00000493829 HPS6Q86YV9 775 aa17.97■□□□□ 0.47
USP39-218ENST00000493829 ZNF583Q96ND8 569 aa17.97■□□□□ 0.47
USP39-218ENST00000493829 SEMA4CQ9C0C4 833 aa17.97■□□□□ 0.47
USP39-218ENST00000493829 WWTR1Q9GZV5 400 aa17.97■□□□□ 0.47
USP39-218ENST00000493829 CELSR3Q9NYQ7 3312 aa17.97■□□□□ 0.47
USP39-218ENST00000493829 C2orf92A0A1B0GVN3 265 aa17.96■□□□□ 0.47
USP39-218ENST00000493829 A0A1W2PQ72 361 aa17.96■□□□□ 0.47
USP39-218ENST00000493829 GXYLT2A0PJZ3 443 aa17.96■□□□□ 0.47
USP39-218ENST00000493829 GABRA3P34903 492 aa17.96■□□□□ 0.47
USP39-218ENST00000493829 RFX3P48380 749 aa17.96■□□□□ 0.47
USP39-218ENST00000493829 MAN2A2P49641 1150 aa17.96■□□□□ 0.47
USP39-218ENST00000493829 CLCN2P51788 898 aa17.96■□□□□ 0.47
USP39-218ENST00000493829 EEFSECP57772 596 aaKnown RBP17.96■□□□□ 0.47
USP39-218ENST00000493829 RNF4P78317 190 aa17.96■□□□□ 0.47
USP39-218ENST00000493829 Q0VFX4 171 aa17.96■□□□□ 0.47
USP39-218ENST00000493829 PIGGQ5H8A4 983 aa17.96■□□□□ 0.47
USP39-218ENST00000493829 HLA-DQA1Q5Y7H0 255 aa17.96■□□□□ 0.47
USP39-218ENST00000493829 PLAG1Q6DJT9 500 aa17.96■□□□□ 0.47
USP39-218ENST00000493829 ULK2Q8IYT8 1036 aa17.96■□□□□ 0.47
USP39-218ENST00000493829 LGI4Q8N135 537 aa17.96■□□□□ 0.47
USP39-218ENST00000493829 COX18Q8N8Q8 333 aa17.96■□□□□ 0.47
USP39-218ENST00000493829 OR2T12Q8NG77 320 aa17.96■□□□□ 0.47
USP39-218ENST00000493829 SLC35A4Q96G79 324 aa17.96■□□□□ 0.47
USP39-218ENST00000493829 VPS50Q96JG6 964 aa17.96■□□□□ 0.47
USP39-218ENST00000493829 PPIEQ9UNP9 301 aaKnown RBP17.96■□□□□ 0.47
USP39-218ENST00000493829 FAM220BPB1ANY3 271 aa17.96■□□□□ 0.47
USP39-218ENST00000493829 TNFRSF21O75509 655 aa17.96■□□□□ 0.47
USP39-218ENST00000493829 BCHEP06276 602 aa17.96■□□□□ 0.47
USP39-218ENST00000493829 ANXA11P50995 505 aaKnown RBP17.96■□□□□ 0.47
USP39-218ENST00000493829 GZMMP51124 257 aa17.96■□□□□ 0.47
USP39-218ENST00000493829 PSG6Q00889 435 aa17.96■□□□□ 0.47
USP39-218ENST00000493829 CHAF1BQ13112 559 aa17.96■□□□□ 0.47
USP39-218ENST00000493829 MYBPC3Q14896 1274 aa17.96■□□□□ 0.47
USP39-218ENST00000493829 CCNJQ5T5M9 372 aa17.96■□□□□ 0.47
USP39-218ENST00000493829 FCRLBQ6BAA4 426 aa17.96■□□□□ 0.47
USP39-218ENST00000493829 PTOV1Q86YD1 416 aa17.96■□□□□ 0.47
USP39-218ENST00000493829 ZZZ3Q8IYH5 903 aa17.96■□□□□ 0.47
USP39-218ENST00000493829 OR4N2Q8NGD1 307 aa17.96■□□□□ 0.47
USP39-218ENST00000493829 MIPOL1Q8TD10 442 aa17.96■□□□□ 0.47
USP39-218ENST00000493829 RMND5BQ96G75 393 aaPredicted RBP17.96■□□□□ 0.47
USP39-218ENST00000493829 LMF1Q96S06 567 aa17.96■□□□□ 0.47
USP39-218ENST00000493829 CCNL2Q96S94 520 aaPredicted RBP17.96■□□□□ 0.47
USP39-218ENST00000493829 LMF2Q9BU23 707 aaKnown RBP17.96■□□□□ 0.47
USP39-218ENST00000493829 NXF5Q9H1B4 397 aaKnown RBP17.96■□□□□ 0.47
USP39-218ENST00000493829 EGFL7Q9UHF1 273 aa17.96■□□□□ 0.47
USP39-218ENST00000493829 CFL2Q9Y281 166 aa17.96■□□□□ 0.47
USP39-218ENST00000493829 OR10H1Q9Y4A9 318 aa17.96■□□□□ 0.47
USP39-218ENST00000493829 GMEB1Q9Y692 573 aa17.96■□□□□ 0.47
USP39-218ENST00000493829 ARGFXA6NJG6 315 aa17.95■□□□□ 0.46
USP39-218ENST00000493829 OR6C76A6NM76 312 aa17.95■□□□□ 0.46
USP39-218ENST00000493829 ITGAMP11215 1152 aa17.95■□□□□ 0.46
USP39-218ENST00000493829 ST13P50502 369 aaKnown RBP17.95■□□□□ 0.46
USP39-218ENST00000493829 NR0B1P51843 470 aaKnown RBP17.95■□□□□ 0.46
USP39-218ENST00000493829 FUT5Q11128 374 aa17.95■□□□□ 0.46
USP39-218ENST00000493829 ADRM1Q16186 407 aa17.95■□□□□ 0.46
USP39-218ENST00000493829 SYPL1Q16563 259 aa17.95■□□□□ 0.46
USP39-218ENST00000493829 RPS26P11Q5JNZ5 115 aaPredicted RBP17.95■□□□□ 0.46
USP39-218ENST00000493829 C16orf62Q7Z3J2 963 aa17.95■□□□□ 0.46
USP39-218ENST00000493829 SERPINA11Q86U17 422 aa17.95■□□□□ 0.46
USP39-218ENST00000493829 CALHM3Q86XJ0 350 aa17.95■□□□□ 0.46
USP39-218ENST00000493829 PRR22Q8IZ63 422 aa17.95■□□□□ 0.46
USP39-218ENST00000493829 NFKBIDQ8NI38 313 aa17.95■□□□□ 0.46
USP39-218ENST00000493829 UTP4Q969X6 686 aaKnown RBP17.95■□□□□ 0.46
USP39-218ENST00000493829 NACC2Q96BF6 587 aa17.95■□□□□ 0.46
USP39-218ENST00000493829 DEFB126Q9BYW3 111 aa17.95■□□□□ 0.46
USP39-218ENST00000493829 CD300AQ9UGN4 299 aa17.95■□□□□ 0.46
USP39-218ENST00000493829 CACNA1AO00555 2505 aa17.94■□□□□ 0.46
USP39-218ENST00000493829 ZNF891A8MT65 544 aaPredicted RBP17.94■□□□□ 0.46
USP39-218ENST00000493829 A8MUI8 341 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms