RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 SLC6A5Q9Y345 797 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 HSPE1-MOB4S4R3N1 261 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 ADCY10Q96PN6 1610 aa7.51□□□□□ -1.21
BRCA1-221ENST00000493795 ADAM10O14672 748 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 MMP20O60882 483 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 BEST1O76090 585 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 RAB3DO95716 219 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 EOMESO95936 686 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 SYPP08247 313 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 PORP16435 677 aaPredicted RBP7.5□□□□□ -1.21
BRCA1-221ENST00000493795 RHCEP18577 417 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 UBE2KP61086 200 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 ADARB1P78563 741 aaKnown RBP7.5□□□□□ -1.21
BRCA1-221ENST00000493795 APOFQ13790 326 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 MEF2DQ14814 521 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 ELOCQ15369 112 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.5□□□□□ -1.21
BRCA1-221ENST00000493795 CST9LP1Q5W188 147 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 PPP2R2DQ66LE6 453 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 FIGNL1Q6PIW4 674 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 PRSS55Q6UWB4 352 aaPredicted RBP7.5□□□□□ -1.21
BRCA1-221ENST00000493795 OTOP2Q7RTS6 562 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 SVBPQ8N300 66 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 OR6T1Q8NGN1 323 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 SFXN5Q8TD22 340 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 FUBP3Q96I24 572 aaKnown RBP eCLIP7.5□□□□□ -1.21
BRCA1-221ENST00000493795 MRI1Q9BV20 369 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 ST6GALNAC5Q9BVH7 336 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 SLC6A17Q9H1V8 727 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 SYNPO2LQ9H987 977 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 PDE7BQ9NP56 450 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 CACNG2Q9Y698 323 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 GLOD5A6NK44 160 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 FAM159BA6NKW6 160 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 NPIPA7E9PJI5 369 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 H7C1Q1 480 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 KLF11O14901 512 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 GPR37L1O60883 481 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 NPIPA8P0DM63 369 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 RAB3AP20336 220 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 DDCP20711 480 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 PREPP48147 710 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 JAM2P57087 298 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 KCNAB2Q13303 367 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 DEFB115Q30KQ5 88 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 RTL6Q6ICC9 239 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 APOBEC3HQ6NTF7 200 aaKnown RBP7.5□□□□□ -1.21
BRCA1-221ENST00000493795 ZNF585AQ6P3V2 769 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 ABHD15Q6UXT9 468 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 PIM3Q86V86 326 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 OR52E2Q8NGJ4 325 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 ADAMTS19Q8TE59 1207 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 CYB5D2Q8WUJ1 264 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 ITPKCQ96DU7 683 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 DNAJB11Q9UBS4 358 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 KLRG2A4D1S0 409 aaPredicted RBP7.5□□□□□ -1.21
BRCA1-221ENST00000493795 ANKRD30BLA7E2S9 258 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 GALTP07902 379 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 METTL15P1P0C7V9 234 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 POLR2CP19387 275 aaPredicted RBP7.5□□□□□ -1.21
BRCA1-221ENST00000493795 SF3B4Q15427 424 aaKnown RBP eCLIP7.5□□□□□ -1.212e-6■■■□□ 15.1
BRCA1-221ENST00000493795 HMGN3Q15651 99 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 MSMO1Q15800 293 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 MRPL21Q7Z2W9 205 aaKnown RBP7.5□□□□□ -1.21
BRCA1-221ENST00000493795 CCDC116Q8IYX3 515 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 FAM58AQ8N1B3 248 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 CELF5Q8N6W0 485 aaKnown RBP7.5□□□□□ -1.21
BRCA1-221ENST00000493795 SYT14Q8NB59 555 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 OR9A2Q8NGT5 310 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 ZFAND1Q8TCF1 268 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 UHRF1Q96T88 793 aaPredicted RBP7.5□□□□□ -1.21
BRCA1-221ENST00000493795 PRRT1Q99946 306 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 SAGE1Q9NXZ1 904 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 NENFQ9UMX5 172 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 PCDHB10Q9UN67 800 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 TMEM98Q9Y2Y6 226 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 MYO5CQ9NQX4 1742 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 IMPA2O14732 288 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 TGM5O43548 720 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 P04436 131 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 TYRP1P17643 537 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 GGT1P19440 569 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 DRD5P21918 477 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 SOX3P41225 446 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 ZNF92Q03936 586 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 PDLIM3Q53GG5 364 aaPredicted RBP7.5□□□□□ -1.21
BRCA1-221ENST00000493795 PLEKHS1Q5SXH7 462 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 RGMBQ6NW40 437 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 KIAA1191Q96A73 305 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 FAXDC2Q96IV6 333 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 NICN1Q9BSH3 213 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 HDHD5Q9BXW7 423 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 SLC38A1Q9H2H9 487 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 CUTCQ9NTM9 273 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 SLC17A6Q9P2U8 582 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 FZD1Q9UP38 647 aa7.5□□□□□ -1.21
BRCA1-221ENST00000493795 ZNF704Q6ZNC4 412 aaPredicted RBP7.49□□□□□ -1.21
BRCA1-221ENST00000493795 SLC35F2Q8IXU6 374 aa7.49□□□□□ -1.21
BRCA1-221ENST00000493795 LRRC25Q8N386 305 aaPredicted RBP7.49□□□□□ -1.21
BRCA1-221ENST00000493795 IL31RAQ8NI17 732 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms