RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 BTLAQ7Z6A9 289 aa9.07□□□□□ -0.96
NPHP3-209ENST00000493732 MRGPREQ86SM8 312 aa9.07□□□□□ -0.96
NPHP3-209ENST00000493732 IQCHQ86VS3 1027 aa9.07□□□□□ -0.96
NPHP3-209ENST00000493732 NLGN4XQ8N0W4 816 aa9.07□□□□□ -0.96
NPHP3-209ENST00000493732 LRRC25Q8N386 305 aaPredicted RBP9.07□□□□□ -0.96
NPHP3-209ENST00000493732 ZNF655Q8N720 491 aaPredicted RBP9.07□□□□□ -0.96
NPHP3-209ENST00000493732 CAMKVQ8NCB2 501 aa9.07□□□□□ -0.96
NPHP3-209ENST00000493732 MORN4Q8NDC4 146 aa9.07□□□□□ -0.96
NPHP3-209ENST00000493732 OR4E2Q8NGC2 313 aa9.07□□□□□ -0.96
NPHP3-209ENST00000493732 PIGXQ8TBF5 258 aa9.07□□□□□ -0.96
NPHP3-209ENST00000493732 OSTF1Q92882 214 aa9.07□□□□□ -0.96
NPHP3-209ENST00000493732 MRPL38Q96DV4 380 aaKnown RBP9.07□□□□□ -0.96
NPHP3-209ENST00000493732 SIPA1Q96FS4 1042 aa9.07□□□□□ -0.96
NPHP3-209ENST00000493732 RIPOR3Q96MK2 946 aa9.07□□□□□ -0.96
NPHP3-209ENST00000493732 ZNF681Q96N22 645 aa9.07□□□□□ -0.96
NPHP3-209ENST00000493732 OR5M11Q96RB7 305 aa9.07□□□□□ -0.96
NPHP3-209ENST00000493732 NEURL2Q9BR09 285 aa9.07□□□□□ -0.96
NPHP3-209ENST00000493732 CENPOQ9BU64 300 aa9.07□□□□□ -0.96
NPHP3-209ENST00000493732 CCDC32Q9BV29 185 aa9.07□□□□□ -0.96
NPHP3-209ENST00000493732 MED17Q9NVC6 651 aa9.07□□□□□ -0.96
NPHP3-209ENST00000493732 TRNAU1APQ9NX07 287 aaKnown RBP9.07□□□□□ -0.96
NPHP3-209ENST00000493732 NDUFB11Q9NX14 153 aa9.07□□□□□ -0.96
NPHP3-209ENST00000493732 SPHK1Q9NYA1 384 aa9.07□□□□□ -0.96
NPHP3-209ENST00000493732 NLGN3Q9NZ94 848 aa9.07□□□□□ -0.96
NPHP3-209ENST00000493732 PTGFRNQ9P2B2 879 aa9.07□□□□□ -0.96
NPHP3-209ENST00000493732 APOBEC3BQ9UH17 382 aaKnown RBP9.07□□□□□ -0.96
NPHP3-209ENST00000493732 FAM227AF5H4B4 570 aa9.06□□□□□ -0.96
NPHP3-209ENST00000493732 M0R129 80 aa9.06□□□□□ -0.96
NPHP3-209ENST00000493732 SLC31A1O15431 190 aa9.06□□□□□ -0.96
NPHP3-209ENST00000493732 PRODHO43272 600 aa9.06□□□□□ -0.96
NPHP3-209ENST00000493732 B3GALT2O43825 422 aa9.06□□□□□ -0.96
NPHP3-209ENST00000493732 OR5F1O95221 314 aa9.06□□□□□ -0.96
NPHP3-209ENST00000493732 APOA1P02647 267 aa9.06□□□□□ -0.96
NPHP3-209ENST00000493732 TP53P04637 393 aaPredicted RBP9.06□□□□□ -0.96
NPHP3-209ENST00000493732 ACP2P11117 423 aa9.06□□□□□ -0.96
NPHP3-209ENST00000493732 IMPDH2P12268 514 aa9.06□□□□□ -0.96
NPHP3-209ENST00000493732 EN2P19622 333 aaPredicted RBP9.06□□□□□ -0.96
NPHP3-209ENST00000493732 CPN2P22792 545 aa9.06□□□□□ -0.96
NPHP3-209ENST00000493732 PEBP1P30086 187 aaKnown RBP9.06□□□□□ -0.96
NPHP3-209ENST00000493732 MAN2A2P49641 1150 aa9.06□□□□□ -0.96
NPHP3-209ENST00000493732 RORCP51449 518 aa9.06□□□□□ -0.96
NPHP3-209ENST00000493732 YPEL5P62699 121 aa9.06□□□□□ -0.96
NPHP3-209ENST00000493732 EFNB1P98172 346 aa9.06□□□□□ -0.96
NPHP3-209ENST00000493732 TNFRSF17Q02223 184 aa9.06□□□□□ -0.96
NPHP3-209ENST00000493732 FOXD4Q12950 439 aaPredicted RBP9.06□□□□□ -0.96
NPHP3-209ENST00000493732 SNAPC1Q16533 368 aa9.06□□□□□ -0.96
NPHP3-209ENST00000493732 DECR1Q16698 335 aa9.06□□□□□ -0.96
NPHP3-209ENST00000493732 SYT14P1Q58G82 188 aa9.06□□□□□ -0.96
NPHP3-209ENST00000493732 C18orf63Q68DL7 685 aa9.06□□□□□ -0.96
NPHP3-209ENST00000493732 HEPHL1Q6MZM0 1159 aa9.06□□□□□ -0.96
NPHP3-209ENST00000493732 CDC73Q6P1J9 531 aa9.06□□□□□ -0.96
NPHP3-209ENST00000493732 ENPP7Q6UWV6 458 aa9.06□□□□□ -0.96
NPHP3-209ENST00000493732 ABHD13Q7L211 337 aa9.06□□□□□ -0.96
NPHP3-209ENST00000493732 LYSMD2Q8IV50 215 aa9.06□□□□□ -0.96
NPHP3-209ENST00000493732 RBM12BQ8IXT5 1001 aaKnown RBP9.06□□□□□ -0.96
NPHP3-209ENST00000493732 PEX5LQ8IYB4 626 aa9.06□□□□□ -0.96
NPHP3-209ENST00000493732 OR4K14Q8NGD5 310 aa9.06□□□□□ -0.96
NPHP3-209ENST00000493732 TMEM163Q8TC26 289 aa9.06□□□□□ -0.96
NPHP3-209ENST00000493732 ACOT11Q8WXI4 607 aaPredicted RBP9.06□□□□□ -0.96
NPHP3-209ENST00000493732 UCN3Q969E3 161 aa9.06□□□□□ -0.96
NPHP3-209ENST00000493732 LRR1Q96L50 414 aa9.06□□□□□ -0.96
NPHP3-209ENST00000493732 OPALINQ96PE5 141 aa9.06□□□□□ -0.96
NPHP3-209ENST00000493732 SLC38A1Q9H2H9 487 aa9.06□□□□□ -0.96
NPHP3-209ENST00000493732 FGF20Q9NP95 211 aaPredicted RBP9.06□□□□□ -0.96
NPHP3-209ENST00000493732 MAN2C1Q9NTJ4 1040 aa9.06□□□□□ -0.96
NPHP3-209ENST00000493732 IRAK4Q9NWZ3 460 aa9.06□□□□□ -0.96
NPHP3-209ENST00000493732 DNAJC27Q9NZQ0 273 aa9.06□□□□□ -0.96
NPHP3-209ENST00000493732 ZNF229Q9UJW7 825 aa9.06□□□□□ -0.96
NPHP3-209ENST00000493732 EXOSC1Q9Y3B2 195 aaKnown RBP9.06□□□□□ -0.96
NPHP3-209ENST00000493732 PLEKHM1Q9Y4G2 1056 aa9.06□□□□□ -0.96
NPHP3-209ENST00000493732 ENTPD2Q9Y5L3 495 aa9.06□□□□□ -0.96
NPHP3-209ENST00000493732 PLXND1Q9Y4D7 1925 aa9.06□□□□□ -0.96
NPHP3-209ENST00000493732 TMEM129A0AVI4 362 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 FAM221BA6H8Z2 402 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 ANTXRLA6NF34 631 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 FAM170BA6NMN3 283 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 STK25O00506 426 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 HMGN1P05114 100 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 FUT4P22083 530 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 HNRNPA2B1P22626 353 aaKnown RBP9.05□□□□□ -0.96
NPHP3-209ENST00000493732 FPR3P25089 353 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 MAT2AP31153 395 aaKnown RBP9.05□□□□□ -0.96
NPHP3-209ENST00000493732 GRK5P34947 590 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 MC3RP41968 323 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 RPS3AP61247 264 aaKnown RBP9.05□□□□□ -0.96
NPHP3-209ENST00000493732 MRPS21P82921 87 aaKnown RBP9.05□□□□□ -0.96
NPHP3-209ENST00000493732 IFITM3Q01628 133 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 FUT5Q11128 374 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 ZCCHC12Q6PEW1 402 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 ZNF730Q6ZMV8 503 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 USP53Q70EK8 1073 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 SLC22A16Q86VW1 577 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 PARP16Q8N5Y8 322 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 ZBTB8BQ8NAP8 495 aaPredicted RBP9.05□□□□□ -0.96
NPHP3-209ENST00000493732 OR9A2Q8NGT5 310 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 OR52P1PQ8NH57 321 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 RSC1A1Q92681 617 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 FGF14Q92915 247 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 TM4SF19Q96DZ7 209 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 ZNF582Q96NG8 517 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms