RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 LCE2BO14633 110 aa11.54□□□□□ -0.56
SNX17-208ENST00000493711 ACOX3O15254 700 aa11.54□□□□□ -0.56
SNX17-208ENST00000493711 DNAJA2O60884 412 aa11.54□□□□□ -0.56
SNX17-208ENST00000493711 UNC5CO95185 931 aa11.54□□□□□ -0.56
SNX17-208ENST00000493711 CBX6O95503 412 aa11.54□□□□□ -0.56
SNX17-208ENST00000493711 AK1P00568 194 aa11.54□□□□□ -0.56
SNX17-208ENST00000493711 HMGN2P05204 90 aaKnown RBP11.54□□□□□ -0.56
SNX17-208ENST00000493711 ALOX5P09917 674 aa11.54□□□□□ -0.56
SNX17-208ENST00000493711 CD1EP15812 388 aa11.54□□□□□ -0.56
SNX17-208ENST00000493711 DRD5P21918 477 aa11.54□□□□□ -0.56
SNX17-208ENST00000493711 EMDP50402 254 aa11.54□□□□□ -0.56
SNX17-208ENST00000493711 RNF4P78317 190 aa11.54□□□□□ -0.56
SNX17-208ENST00000493711 TLE3Q04726 772 aa11.54□□□□□ -0.56
SNX17-208ENST00000493711 ZNF155Q12901 538 aaPredicted RBP11.54□□□□□ -0.56
SNX17-208ENST00000493711 CHAF1BQ13112 559 aa11.54□□□□□ -0.56
SNX17-208ENST00000493711 GAB1Q13480 694 aa11.54□□□□□ -0.56
SNX17-208ENST00000493711 GNA13Q14344 377 aa11.54□□□□□ -0.56
SNX17-208ENST00000493711 EXOSC7Q15024 291 aaKnown RBP11.54□□□□□ -0.56
SNX17-208ENST00000493711 ATAD3BQ5T9A4 648 aa11.54□□□□□ -0.56
SNX17-208ENST00000493711 NANOGP8Q6NSW7 305 aa11.54□□□□□ -0.56
SNX17-208ENST00000493711 CDC73Q6P1J9 531 aa11.54□□□□□ -0.56
SNX17-208ENST00000493711 ANGPTL8Q6UXH0 198 aa11.54□□□□□ -0.56
SNX17-208ENST00000493711 DNAJC14Q6Y2X3 702 aaPredicted RBP11.54□□□□□ -0.56
SNX17-208ENST00000493711 ARHGAP24Q8N264 748 aa11.54□□□□□ -0.56
SNX17-208ENST00000493711 SLC15A4Q8N697 577 aa11.54□□□□□ -0.56
SNX17-208ENST00000493711 OR5AK3PQ8NH89 298 aa11.54□□□□□ -0.56
SNX17-208ENST00000493711 C16orf52Q8NHV5 167 aa11.54□□□□□ -0.56
SNX17-208ENST00000493711 ADAMTS15Q8TE58 950 aa11.54□□□□□ -0.56
SNX17-208ENST00000493711 BTBD9Q96Q07 612 aa11.54□□□□□ -0.56
SNX17-208ENST00000493711 STACQ99469 402 aa11.54□□□□□ -0.56
SNX17-208ENST00000493711 LMF2Q9BU23 707 aaKnown RBP11.54□□□□□ -0.56
SNX17-208ENST00000493711 THUMPD3Q9BV44 507 aaKnown RBP11.54□□□□□ -0.56
SNX17-208ENST00000493711 SPATA9Q9BWV2 254 aa11.54□□□□□ -0.56
SNX17-208ENST00000493711 NANOGQ9H9S0 305 aa11.54□□□□□ -0.56
SNX17-208ENST00000493711 IL1RL2Q9HB29 575 aa11.54□□□□□ -0.56
SNX17-208ENST00000493711 FOLH1BQ9HBA9 442 aa11.54□□□□□ -0.56
SNX17-208ENST00000493711 Q9N2J8 555 aa11.54□□□□□ -0.56
SNX17-208ENST00000493711 SPAG4Q9NPE6 437 aa11.54□□□□□ -0.56
SNX17-208ENST00000493711 DUSP22Q9NRW4 184 aa11.54□□□□□ -0.56
SNX17-208ENST00000493711 EXD2Q9NVH0 621 aa11.54□□□□□ -0.56
SNX17-208ENST00000493711 GPATCH2Q9NW75 528 aa11.54□□□□□ -0.56
SNX17-208ENST00000493711 SLC25A37Q9NYZ2 338 aa11.54□□□□□ -0.56
SNX17-208ENST00000493711 VAPAQ9P0L0 249 aa11.54□□□□□ -0.56
SNX17-208ENST00000493711 MRTO4Q9UKD2 239 aaKnown RBP11.54□□□□□ -0.56
SNX17-208ENST00000493711 ERVK-11Q9UQG0 969 aa11.54□□□□□ -0.56
SNX17-208ENST00000493711 RAXQ9Y2V3 346 aa11.54□□□□□ -0.56
SNX17-208ENST00000493711 L3MBTL1Q9Y468 752 aa11.54□□□□□ -0.56
SNX17-208ENST00000493711 SPTBP11277 2137 aa11.54□□□□□ -0.56
SNX17-208ENST00000493711 SDK2Q58EX2 2172 aa11.54□□□□□ -0.56
SNX17-208ENST00000493711 AKAP13Q12802 2813 aa11.54□□□□□ -0.56
SNX17-208ENST00000493711 FLNBO75369 2602 aaKnown RBP11.54□□□□□ -0.56
SNX17-208ENST00000493711 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.53□□□□□ -0.56
SNX17-208ENST00000493711 FRG2CA6NGY1 282 aa11.53□□□□□ -0.56
SNX17-208ENST00000493711 FXYD1O00168 92 aa11.53□□□□□ -0.56
SNX17-208ENST00000493711 CLPSP04118 112 aa11.53□□□□□ -0.56
SNX17-208ENST00000493711 T-ENOLP0DO92 83 aa11.53□□□□□ -0.56
SNX17-208ENST00000493711 PRKAR1AP10644 381 aa11.53□□□□□ -0.56
SNX17-208ENST00000493711 GPX2P18283 190 aa11.53□□□□□ -0.56
SNX17-208ENST00000493711 MATN1P21941 496 aa11.53□□□□□ -0.56
SNX17-208ENST00000493711 PTGER1P34995 402 aa11.53□□□□□ -0.56
SNX17-208ENST00000493711 SOX18P35713 384 aa11.53□□□□□ -0.56
SNX17-208ENST00000493711 NRG3P56975 720 aa11.53□□□□□ -0.56
SNX17-208ENST00000493711 EBPQ15125 230 aaKnown RBP11.53□□□□□ -0.56
SNX17-208ENST00000493711 RGNQ15493 299 aa11.53□□□□□ -0.56
SNX17-208ENST00000493711 CYP27C1Q4G0S4 372 aa11.53□□□□□ -0.56
SNX17-208ENST00000493711 DNAL1Q4LDG9 190 aa11.53□□□□□ -0.56
SNX17-208ENST00000493711 YTHDF3Q7Z739 585 aaKnown RBP11.53□□□□□ -0.56
SNX17-208ENST00000493711 APLFQ8IW19 511 aaPredicted RBP11.53□□□□□ -0.56
SNX17-208ENST00000493711 MSRB3Q8IXL7 192 aa11.53□□□□□ -0.56
SNX17-208ENST00000493711 PGAM4Q8N0Y7 254 aa11.53□□□□□ -0.56
SNX17-208ENST00000493711 TAGAPQ8N103 731 aa11.53□□□□□ -0.56
SNX17-208ENST00000493711 ARMC10Q8N2F6 343 aa11.53□□□□□ -0.56
SNX17-208ENST00000493711 METTL25Q8N6Q8 603 aa11.53□□□□□ -0.56
SNX17-208ENST00000493711 HOXB13Q92826 284 aaPredicted RBP11.53□□□□□ -0.56
SNX17-208ENST00000493711 PMM1Q92871 262 aa11.53□□□□□ -0.56
SNX17-208ENST00000493711 HSPBAP1Q96EW2 488 aa11.53□□□□□ -0.56
SNX17-208ENST00000493711 GIMAP5Q96F15 307 aa11.53□□□□□ -0.56
SNX17-208ENST00000493711 LCORQ96JN0 433 aaPredicted RBP11.53□□□□□ -0.56
SNX17-208ENST00000493711 VSTM2LQ96N03 204 aa11.53□□□□□ -0.56
SNX17-208ENST00000493711 ECSITQ9BQ95 431 aa11.53□□□□□ -0.56
SNX17-208ENST00000493711 CPPED1Q9BRF8 314 aaPredicted RBP11.53□□□□□ -0.56
SNX17-208ENST00000493711 GPATCH1Q9BRR8 931 aaKnown RBP11.53□□□□□ -0.56
SNX17-208ENST00000493711 WWTR1Q9GZV5 400 aa11.53□□□□□ -0.56
SNX17-208ENST00000493711 LHPPQ9H008 270 aa11.53□□□□□ -0.56
SNX17-208ENST00000493711 PIGUQ9H490 435 aa11.53□□□□□ -0.56
SNX17-208ENST00000493711 SLC6A13Q9NSD5 602 aa11.53□□□□□ -0.56
SNX17-208ENST00000493711 SLAMF8Q9P0V8 285 aa11.53□□□□□ -0.56
SNX17-208ENST00000493711 ABI3Q9P2A4 366 aa11.53□□□□□ -0.56
SNX17-208ENST00000493711 LIPT1Q9Y234 373 aa11.53□□□□□ -0.56
SNX17-208ENST00000493711 GPR55Q9Y2T6 319 aaPredicted RBP11.53□□□□□ -0.56
SNX17-208ENST00000493711 ZNF451Q9Y4E5 1061 aa11.53□□□□□ -0.56
SNX17-208ENST00000493711 AHCTF1Q8WYP5 2266 aa11.53□□□□□ -0.56
SNX17-208ENST00000493711 K7ENP7 123 aa11.52□□□□□ -0.57
SNX17-208ENST00000493711 HRKO00198 91 aa11.52□□□□□ -0.57
SNX17-208ENST00000493711 TO15178 435 aa11.52□□□□□ -0.57
SNX17-208ENST00000493711 NKX2-2O95096 273 aa11.52□□□□□ -0.57
SNX17-208ENST00000493711 NAGAP17050 411 aa11.52□□□□□ -0.57
SNX17-208ENST00000493711 WT1P19544 449 aaPredicted RBP11.52□□□□□ -0.57
SNX17-208ENST00000493711 SLC6A2P23975 617 aa11.52□□□□□ -0.57
SNX17-208ENST00000493711 ITGA3P26006 1051 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms