RNA–Protein interactions for RNA: ENST00000493662.6

MSH5-SAPCD1-207, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene MSH5-SAPCD1, Length 3,991 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-207ENST00000493662 SPAG16Q8N0X2 631 aa10.18□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 OR10G2Q8NGC3 310 aa10.18□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 USP7Q93009 1102 aa10.18□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 ZFP3Q96NJ6 502 aa10.18□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 MND1Q9BWT6 205 aa10.18□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 ABCG4Q9H172 646 aa10.18□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 TBC1D17Q9HA65 648 aa10.18□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 SEMA3GQ9NS98 782 aa10.18□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 HRASLS2Q9NWW9 162 aa10.18□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 ZNF780BQ9Y6R6 833 aa10.18□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 NBASA2RRP1 2371 aa10.18□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 CACNA1HO95180 2353 aa10.18□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 A0A0G2JMZ2 1700 aa10.18□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 ADAMDEC1O15204 470 aa10.18□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 AKR7A2O43488 359 aa10.18□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 CCNB2O95067 398 aa10.18□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 EGFP01133 1207 aa10.18□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 SRPRAP08240 638 aaKnown RBP10.18□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 LCN1P31025 176 aa10.18□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 PFN3P60673 137 aa10.18□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 EIF4HQ15056 248 aaKnown RBP10.18□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 TOR1AIP1Q5JTV8 583 aa10.18□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 CDC73Q6P1J9 531 aa10.18□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 CYHR1Q6ZMK1 362 aa10.18□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 PIGKQ92643 395 aa10.18□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 FAIM2Q9BWQ8 316 aa10.18□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 SPNS1Q9H2V7 528 aa10.18□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 ZNF576Q9H609 170 aa10.18□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 MS4A12Q9NXJ0 267 aa10.18□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 SH2B3Q9UQQ2 575 aa10.18□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 SIP14410 1827 aa10.18□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 STX11O75558 287 aa10.18□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 NPPAP01160 153 aa10.18□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 CPN2P22792 545 aa10.18□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 GALNT1Q10472 559 aaPredicted RBP10.18□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 VN1R5Q7Z5H4 357 aa10.18□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 ADAMTS15Q8TE58 950 aa10.18□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 PDXPQ96GD0 296 aa10.18□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 SLC29A3Q9BZD2 475 aa10.18□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 RDH14Q9HBH5 336 aa10.18□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 SEC14L4Q9UDX3 406 aa10.18□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 HSPE1-MOB4S4R3N1 261 aa10.18□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 A0A1W2PQL4 384 aaPredicted RBP10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 SSTR2P30874 369 aa10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 TIA1P31483 386 aaKnown RBP eCLIP10.17□□□□□ -0.781e-6■■■■□ 19.4
MSH5-SAPCD1-207ENST00000493662 RPS21P63220 83 aaKnown RBP10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 CDK6Q00534 326 aa10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 RAB30Q15771 203 aa10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 HENMT1Q5T8I9 393 aaKnown RBP10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 XAF1Q6GPH4 301 aa10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 HAGHLQ6PII5 290 aaPredicted RBP10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 IL17RDQ8NFM7 739 aa10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 COQ8BQ96D53 544 aa10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 COQ10AQ96MF6 247 aa10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 INSM2Q96T92 566 aaPredicted RBP10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 FOLH1BQ9HBA9 442 aa10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 TAS2R7Q9NYW3 318 aa10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 OR10H1Q9Y4A9 318 aa10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 SPACA6W5XKT8 324 aa10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 GREB1Q4ZG55 1949 aa10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 GMDSO60547 372 aa10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 OLFM2O95897 454 aa10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 OR12D1P0DN82 309 aa10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 ANXA8P13928 327 aa10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 NOS3P29474 1203 aa10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 CMPK1P30085 196 aa10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 CSTF2P33240 577 aaKnown RBP eCLIP10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 TPMTP51580 245 aa10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 CLDN8P56748 225 aa10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 FBXW4P57775 412 aa10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 PCDH1Q08174 1060 aa10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 DUSP7Q16829 419 aa10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 SYT6Q5T7P8 510 aaPredicted RBP10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 NXPE4Q6UWF7 544 aa10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 LYPD8Q6UX82 237 aa10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 ZNF852Q6ZMS4 543 aa10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 SLC22A8Q8TCC7 542 aa10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 ZFAND1Q8TCF1 268 aa10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 ZC3H10Q96K80 434 aaKnown RBP10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 QRSL1Q9H0R6 528 aaKnown RBP10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 COLEC10Q9Y6Z7 277 aa10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 MIA3Q5JRA6 1907 aa10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 TRIM64A6NGJ6 449 aa10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 TRIM64BA6NI03 449 aa10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 SLC22A5O76082 557 aa10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 SLC35G6P0C7Q6 338 aa10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 GGT1P19440 569 aa10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 VSX2P58304 361 aaPredicted RBP10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 RGS1Q08116 209 aa10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 MAD2L1BPQ15013 274 aaPredicted RBP10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 PROX2Q3B8N5 592 aa10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 IGSF11Q5DX21 431 aa10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 COQ5Q5HYK3 327 aa10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 NDUFAF5Q5TEU4 345 aa10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 NXNL2Q5VZ03 156 aa10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 GTF2IRD2BQ6EKJ0 949 aa10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 GTF2IRD2Q86UP8 949 aa10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 IQCHQ86VS3 1027 aa10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 NUDT13Q86X67 352 aa10.17□□□□□ -0.78
MSH5-SAPCD1-207ENST00000493662 FBXO15Q8NCQ5 510 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms