RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 CBLCQ9ULV8 474 aa8.11□□□□□ -1.11
HDAC3-211ENST00000491581 PLEKHA6Q9Y2H5 1048 aa8.11□□□□□ -1.11
HDAC3-211ENST00000491581 POLR3HQ9Y535 204 aaPredicted RBP8.11□□□□□ -1.11
HDAC3-211ENST00000491581 IKBKGQ9Y6K9 419 aa8.11□□□□□ -1.11
HDAC3-211ENST00000491581 MED12LQ86YW9 2145 aa8.11□□□□□ -1.11
HDAC3-211ENST00000491581 SCO2O43819 266 aa8.1□□□□□ -1.11
HDAC3-211ENST00000491581 REM1O75628 298 aa8.1□□□□□ -1.11
HDAC3-211ENST00000491581 CTAG2O75638 210 aa8.1□□□□□ -1.11
HDAC3-211ENST00000491581 KRT38O76015 456 aa8.1□□□□□ -1.11
HDAC3-211ENST00000491581 ZWINTO95229 277 aa8.1□□□□□ -1.11
HDAC3-211ENST00000491581 EPPINO95925 133 aa8.1□□□□□ -1.11
HDAC3-211ENST00000491581 ATP1B1P05026 303 aa8.1□□□□□ -1.11
HDAC3-211ENST00000491581 JUNP05412 331 aaKnown RBP8.1□□□□□ -1.11
HDAC3-211ENST00000491581 CSNK2A2P19784 350 aaPredicted RBP8.1□□□□□ -1.11
HDAC3-211ENST00000491581 TACR1P25103 407 aa8.1□□□□□ -1.11
HDAC3-211ENST00000491581 HMOX2P30519 316 aa8.1□□□□□ -1.11
HDAC3-211ENST00000491581 CEACAM8P31997 349 aaPredicted RBP8.1□□□□□ -1.11
HDAC3-211ENST00000491581 GALNSP34059 522 aa8.1□□□□□ -1.11
HDAC3-211ENST00000491581 ARFIP1P53367 373 aa8.1□□□□□ -1.11
HDAC3-211ENST00000491581 STX5Q13190 355 aa8.1□□□□□ -1.11
HDAC3-211ENST00000491581 CEBPEQ15744 281 aa8.1□□□□□ -1.11
HDAC3-211ENST00000491581 RIPPLY2Q5TAB7 128 aa8.1□□□□□ -1.11
HDAC3-211ENST00000491581 CLEC6AQ6EIG7 209 aa8.1□□□□□ -1.11
HDAC3-211ENST00000491581 CCDC91Q7Z6B0 441 aa8.1□□□□□ -1.11
HDAC3-211ENST00000491581 LUZP2Q86TE4 346 aa8.1□□□□□ -1.11
HDAC3-211ENST00000491581 TRIM42Q8IWZ5 723 aa8.1□□□□□ -1.11
HDAC3-211ENST00000491581 EID3Q8N140 333 aa8.1□□□□□ -1.11
HDAC3-211ENST00000491581 CCNYL1Q8N7R7 359 aa8.1□□□□□ -1.11
HDAC3-211ENST00000491581 OR1J4Q8NGS1 313 aa8.1□□□□□ -1.11
HDAC3-211ENST00000491581 OR2W6PQ8NHA6 318 aa8.1□□□□□ -1.11
HDAC3-211ENST00000491581 FBXO30Q8TB52 745 aa8.1□□□□□ -1.11
HDAC3-211ENST00000491581 METTL6Q8TCB7 284 aa8.1□□□□□ -1.11
HDAC3-211ENST00000491581 EPS8L3Q8TE67 593 aaKnown RBP8.1□□□□□ -1.11
HDAC3-211ENST00000491581 GFM2Q969S9 779 aaKnown RBP8.1□□□□□ -1.11
HDAC3-211ENST00000491581 TMEM41AQ96HV5 264 aa8.1□□□□□ -1.11
HDAC3-211ENST00000491581 OSBPL11Q9BXB4 747 aa8.1□□□□□ -1.11
HDAC3-211ENST00000491581 PRDM14Q9GZV8 571 aa8.1□□□□□ -1.11
HDAC3-211ENST00000491581 FOLH1BQ9HBA9 442 aa8.1□□□□□ -1.11
HDAC3-211ENST00000491581 MID1IP1Q9NPA3 183 aa8.1□□□□□ -1.11
HDAC3-211ENST00000491581 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.1□□□□□ -1.11
HDAC3-211ENST00000491581 KLRF1Q9NZS2 232 aa8.1□□□□□ -1.11
HDAC3-211ENST00000491581 VPS29Q9UBQ0 182 aa8.1□□□□□ -1.11
HDAC3-211ENST00000491581 ADAM29Q9UKF5 820 aa8.1□□□□□ -1.11
HDAC3-211ENST00000491581 SNX6Q9UNH7 406 aa8.1□□□□□ -1.11
HDAC3-211ENST00000491581 GPR55Q9Y2T6 319 aaPredicted RBP8.1□□□□□ -1.11
HDAC3-211ENST00000491581 FIS1Q9Y3D6 152 aa8.1□□□□□ -1.11
HDAC3-211ENST00000491581 GNG14A0A1W2PPG7 69 aa8.09□□□□□ -1.11
HDAC3-211ENST00000491581 ANKRD33BA6NCL7 494 aa8.09□□□□□ -1.11
HDAC3-211ENST00000491581 PRAMEF25A6NGN4 478 aa8.09□□□□□ -1.11
HDAC3-211ENST00000491581 TMEM233B4DJY2 109 aa8.09□□□□□ -1.11
HDAC3-211ENST00000491581 EEF1E1-BLOC1S5C9J1V9 151 aa8.09□□□□□ -1.11
HDAC3-211ENST00000491581 TP53I11O14683 189 aa8.09□□□□□ -1.11
HDAC3-211ENST00000491581 EEF1E1O43324 174 aaKnown RBP8.09□□□□□ -1.11
HDAC3-211ENST00000491581 TSPAN2O60636 221 aa8.09□□□□□ -1.11
HDAC3-211ENST00000491581 TGM6O95932 706 aa8.09□□□□□ -1.11
HDAC3-211ENST00000491581 OPN1LWP04000 364 aa8.09□□□□□ -1.11
HDAC3-211ENST00000491581 COL6A2P12110 1019 aa8.09□□□□□ -1.11
HDAC3-211ENST00000491581 CYP4B1P13584 511 aa8.09□□□□□ -1.11
HDAC3-211ENST00000491581 KRT15P19012 456 aa8.09□□□□□ -1.11
HDAC3-211ENST00000491581 IMPDH1P20839 514 aa8.09□□□□□ -1.11
HDAC3-211ENST00000491581 TIA1P31483 386 aaKnown RBP eCLIP8.09□□□□□ -1.11
HDAC3-211ENST00000491581 MC3RP41968 323 aa8.09□□□□□ -1.11
HDAC3-211ENST00000491581 KIR2DL3P43628 341 aa8.09□□□□□ -1.11
HDAC3-211ENST00000491581 RFX3P48380 749 aa8.09□□□□□ -1.11
HDAC3-211ENST00000491581 PRKAA2P54646 552 aa8.09□□□□□ -1.11
HDAC3-211ENST00000491581 GAS1P54826 345 aa8.09□□□□□ -1.11
HDAC3-211ENST00000491581 CLDN15P56746 228 aa8.09□□□□□ -1.11
HDAC3-211ENST00000491581 C2orf80Q0P641 193 aa8.09□□□□□ -1.11
HDAC3-211ENST00000491581 ZNF385BQ569K4 471 aa8.09□□□□□ -1.11
HDAC3-211ENST00000491581 SPDYAQ5MJ70 313 aa8.09□□□□□ -1.11
HDAC3-211ENST00000491581 TMEM107Q6UX40 140 aa8.09□□□□□ -1.11
HDAC3-211ENST00000491581 TIFABQ6ZNK6 161 aa8.09□□□□□ -1.11
HDAC3-211ENST00000491581 SH2D5Q6ZV89 423 aa8.09□□□□□ -1.11
HDAC3-211ENST00000491581 PAGE2Q7Z2X7 111 aa8.09□□□□□ -1.11
HDAC3-211ENST00000491581 EXOC3L1Q86VI1 746 aa8.09□□□□□ -1.11
HDAC3-211ENST00000491581 PACS2Q86VP3 889 aa8.09□□□□□ -1.11
HDAC3-211ENST00000491581 CDC20BQ86Y33 519 aa8.09□□□□□ -1.11
HDAC3-211ENST00000491581 SLC44A2Q8IWA5 706 aaPredicted RBP8.09□□□□□ -1.11
HDAC3-211ENST00000491581 UBQLNLQ8IYU4 475 aa8.09□□□□□ -1.11
HDAC3-211ENST00000491581 OR7G1Q8NGA0 311 aa8.09□□□□□ -1.11
HDAC3-211ENST00000491581 OR2T11Q8NH01 316 aa8.09□□□□□ -1.11
HDAC3-211ENST00000491581 OR14L1PQ8NHC6 308 aa8.09□□□□□ -1.11
HDAC3-211ENST00000491581 CLHC1Q8NHS4 586 aa8.09□□□□□ -1.11
HDAC3-211ENST00000491581 ABTB1Q969K4 478 aaPredicted RBP8.09□□□□□ -1.11
HDAC3-211ENST00000491581 CIDECQ96AQ7 238 aaPredicted RBP8.09□□□□□ -1.11
HDAC3-211ENST00000491581 INTS12Q96CB8 462 aaKnown RBP8.09□□□□□ -1.11
HDAC3-211ENST00000491581 C11orf24Q96F05 449 aaPredicted RBP8.09□□□□□ -1.11
HDAC3-211ENST00000491581 ZNF382Q96SR6 550 aa8.09□□□□□ -1.11
HDAC3-211ENST00000491581 POLDIP3Q9BY77 421 aaKnown RBP8.09□□□□□ -1.11
HDAC3-211ENST00000491581 GSX1Q9H4S2 264 aaPredicted RBP8.09□□□□□ -1.11
HDAC3-211ENST00000491581 BRF2Q9HAW0 419 aa8.09□□□□□ -1.11
HDAC3-211ENST00000491581 AHSPQ9NZD4 102 aa8.09□□□□□ -1.11
HDAC3-211ENST00000491581 B4GALT7Q9UBV7 327 aa8.09□□□□□ -1.11
HDAC3-211ENST00000491581 MCM8Q9UJA3 840 aa8.09□□□□□ -1.11
HDAC3-211ENST00000491581 ZNF780BQ9Y6R6 833 aa8.09□□□□□ -1.11
HDAC3-211ENST00000491581 HIVEP1P15822 2718 aa8.09□□□□□ -1.12
HDAC3-211ENST00000491581 ANKRD17O75179 2603 aaKnown RBP8.08□□□□□ -1.12
HDAC3-211ENST00000491581 GXYLT2A0PJZ3 443 aa8.08□□□□□ -1.12
HDAC3-211ENST00000491581 SYNDIG1LA6NDD5 238 aa8.08□□□□□ -1.12
HDAC3-211ENST00000491581 FRG2CA6NGY1 282 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms