RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 TRIM8Q9BZR9 551 aa28.7■■■□□ 2.18
LDB1-204ENST00000490751 UBQLN3Q9H347 655 aa28.7■■■□□ 2.18
LDB1-204ENST00000490751 MYNNQ9NPC7 610 aa28.7■■■□□ 2.18
LDB1-204ENST00000490751 MIEF1Q9NQG6 463 aa28.7■■■□□ 2.18
LDB1-204ENST00000490751 CCL27Q9Y4X3 112 aa28.7■■■□□ 2.18
LDB1-204ENST00000490751 GNB5O14775 395 aa28.69■■■□□ 2.18
LDB1-204ENST00000490751 UGT2B11O75310 529 aa28.69■■■□□ 2.18
LDB1-204ENST00000490751 CDK9P50750 372 aaKnown RBP28.69■■■□□ 2.18
LDB1-204ENST00000490751 IFFO1Q0D2I5 559 aa28.69■■■□□ 2.18
LDB1-204ENST00000490751 PRSS53Q2L4Q9 553 aa28.69■■■□□ 2.18
LDB1-204ENST00000490751 NOXRED1Q6NXP6 359 aa28.69■■■□□ 2.18
LDB1-204ENST00000490751 TMEM81Q6P7N7 255 aa28.69■■■□□ 2.18
LDB1-204ENST00000490751 BANPQ8N9N5 519 aa28.69■■■□□ 2.18
LDB1-204ENST00000490751 BTBD9Q96Q07 612 aa28.69■■■□□ 2.18
LDB1-204ENST00000490751 OSBPL11Q9BXB4 747 aa28.69■■■□□ 2.18
LDB1-204ENST00000490751 UCK2Q9BZX2 261 aa28.69■■■□□ 2.18
LDB1-204ENST00000490751 PTGDR2Q9Y5Y4 395 aa28.69■■■□□ 2.18
LDB1-204ENST00000490751 ABCA12Q86UK0 2595 aa28.69■■■□□ 2.18
LDB1-204ENST00000490751 HCFC1P51610 2035 aa28.69■■■□□ 2.18
LDB1-204ENST00000490751 ARHGAP21Q5T5U3 1957 aa28.68■■■□□ 2.18
LDB1-204ENST00000490751 C15orf38-AP3S2A0A0A6YYH1 394 aa28.68■■■□□ 2.18
LDB1-204ENST00000490751 NKX2-6A6NCS4 301 aa28.68■■■□□ 2.18
LDB1-204ENST00000490751 MYO1GB0I1T2 1018 aa28.68■■■□□ 2.18
LDB1-204ENST00000490751 TRIM13O60858 407 aa28.68■■■□□ 2.18
LDB1-204ENST00000490751 HPNP05981 417 aa28.68■■■□□ 2.18
LDB1-204ENST00000490751 GABRA1P14867 456 aa28.68■■■□□ 2.18
LDB1-204ENST00000490751 ANGPTL8Q6UXH0 198 aa28.68■■■□□ 2.18
LDB1-204ENST00000490751 LURAP1LQ8IV03 231 aa28.68■■■□□ 2.18
LDB1-204ENST00000490751 OR7G2Q8NG99 324 aa28.68■■■□□ 2.18
LDB1-204ENST00000490751 AENQ8WTP8 325 aaKnown RBP28.68■■■□□ 2.18
LDB1-204ENST00000490751 TMBIM1Q969X1 311 aa28.68■■■□□ 2.18
LDB1-204ENST00000490751 VSTM2LQ96N03 204 aa28.68■■■□□ 2.18
LDB1-204ENST00000490751 SPOCK3Q9BQ16 436 aa28.68■■■□□ 2.18
LDB1-204ENST00000490751 ENKD1Q9H0I2 346 aa28.68■■■□□ 2.18
LDB1-204ENST00000490751 FOLH1BQ9HBA9 442 aa28.68■■■□□ 2.18
LDB1-204ENST00000490751 LGALS13Q9UHV8 139 aa28.68■■■□□ 2.18
LDB1-204ENST00000490751 FIS1Q9Y3D6 152 aa28.68■■■□□ 2.18
LDB1-204ENST00000490751 LRBAP50851 2863 aa28.68■■■□□ 2.18
LDB1-204ENST00000490751 APCP25054 2843 aa28.67■■■□□ 2.18
LDB1-204ENST00000490751 AZIN1O14977 448 aa28.67■■■□□ 2.18
LDB1-204ENST00000490751 PLOD3O60568 738 aa28.67■■■□□ 2.18
LDB1-204ENST00000490751 JUNP05412 331 aaKnown RBP28.67■■■□□ 2.18
LDB1-204ENST00000490751 ELAVL4P26378 380 aaKnown RBP28.67■■■□□ 2.18
LDB1-204ENST00000490751 PTGDSP41222 190 aa28.67■■■□□ 2.18
LDB1-204ENST00000490751 CORO7P57737 925 aa28.67■■■□□ 2.18
LDB1-204ENST00000490751 TIGD3Q6B0B8 471 aa28.67■■■□□ 2.18
LDB1-204ENST00000490751 SLC30A6Q6NXT4 461 aa28.67■■■□□ 2.18
LDB1-204ENST00000490751 ACBD4Q8NC06 268 aa28.67■■■□□ 2.18
LDB1-204ENST00000490751 TRMOQ9BU70 441 aa28.67■■■□□ 2.18
LDB1-204ENST00000490751 GALNT9Q9HCQ5 603 aa28.67■■■□□ 2.18
LDB1-204ENST00000490751 KLRF1Q9NZS2 232 aa28.67■■■□□ 2.18
LDB1-204ENST00000490751 EXO1Q9UQ84 846 aaKnown RBP28.67■■■□□ 2.18
LDB1-204ENST00000490751 WBP11Q9Y2W2 641 aaKnown RBP28.67■■■□□ 2.18
LDB1-204ENST00000490751 PCDHGB3Q9Y5G1 929 aa28.67■■■□□ 2.18
LDB1-204ENST00000490751 SLC28A1O00337 649 aa28.66■■■□□ 2.18
LDB1-204ENST00000490751 ICOSLGO75144 302 aa28.66■■■□□ 2.18
LDB1-204ENST00000490751 SEC22BO75396 215 aa28.66■■■□□ 2.18
LDB1-204ENST00000490751 ERN1O75460 977 aaKnown RBP28.66■■■□□ 2.18
LDB1-204ENST00000490751 REM1O75628 298 aa28.66■■■□□ 2.18
LDB1-204ENST00000490751 HOXD4P09016 255 aaPredicted RBP28.66■■■□□ 2.18
LDB1-204ENST00000490751 CT45A8P0DMV1 189 aa28.66■■■□□ 2.18
LDB1-204ENST00000490751 CT45A9P0DMV2 189 aa28.66■■■□□ 2.18
LDB1-204ENST00000490751 PRPH2P23942 346 aa28.66■■■□□ 2.18
LDB1-204ENST00000490751 PTPN6P29350 595 aa28.66■■■□□ 2.18
LDB1-204ENST00000490751 NCBP2P52298 156 aaKnown RBP eCLIP28.66■■■□□ 2.181e-7■■■■□ 26
LDB1-204ENST00000490751 TOMM20Q15388 145 aa28.66■■■□□ 2.18
LDB1-204ENST00000490751 CT45A2Q5DJT8 189 aa28.66■■■□□ 2.18
LDB1-204ENST00000490751 NPSR1Q6W5P4 371 aa28.66■■■□□ 2.18
LDB1-204ENST00000490751 MEX3BQ6ZN04 569 aaKnown RBP28.66■■■□□ 2.18
LDB1-204ENST00000490751 ULK2Q8IYT8 1036 aa28.66■■■□□ 2.18
LDB1-204ENST00000490751 ZNF295-AS1Q8N0V1 137 aa28.66■■■□□ 2.18
LDB1-204ENST00000490751 OR1J4Q8NGS1 313 aa28.66■■■□□ 2.18
LDB1-204ENST00000490751 METTL2AQ96IZ6 378 aaKnown RBP28.66■■■□□ 2.18
LDB1-204ENST00000490751 COL21A1Q96P44 957 aa28.66■■■□□ 2.18
LDB1-204ENST00000490751 FAM111AQ96PZ2 611 aa28.66■■■□□ 2.18
LDB1-204ENST00000490751 STMN4Q9H169 189 aaPredicted RBP28.66■■■□□ 2.18
LDB1-204ENST00000490751 KCNJ16Q9NPI9 418 aa28.66■■■□□ 2.18
LDB1-204ENST00000490751 TAS2R7Q9NYW3 318 aa28.66■■■□□ 2.18
LDB1-204ENST00000490751 CREBBPQ92793 2442 aa28.66■■■□□ 2.18
LDB1-204ENST00000490751 FBN2P35556 2912 aa28.66■■■□□ 2.18
LDB1-204ENST00000490751 A0A0G2JNJ9 132 aa28.65■■■□□ 2.18
LDB1-204ENST00000490751 C2orf72A6NCS6 295 aa28.65■■■□□ 2.18
LDB1-204ENST00000490751 PRAMEF25A6NGN4 478 aa28.65■■■□□ 2.18
LDB1-204ENST00000490751 OR6C70A6NIJ9 312 aa28.65■■■□□ 2.18
LDB1-204ENST00000490751 SNPHO15079 494 aa28.65■■■□□ 2.18
LDB1-204ENST00000490751 RGS14O43566 566 aa28.65■■■□□ 2.18
LDB1-204ENST00000490751 ALDH3A1P30838 453 aa28.65■■■□□ 2.18
LDB1-204ENST00000490751 CRYZQ08257 329 aaKnown RBP28.65■■■□□ 2.18
LDB1-204ENST00000490751 SNTA1Q13424 505 aa28.65■■■□□ 2.18
LDB1-204ENST00000490751 KIAA0040Q15053 153 aa28.65■■■□□ 2.18
LDB1-204ENST00000490751 EMBQ6PCB8 327 aa28.65■■■□□ 2.18
LDB1-204ENST00000490751 IKBIPQ70UQ0 350 aa28.65■■■□□ 2.18
LDB1-204ENST00000490751 LRTM1Q9HBL6 345 aa28.65■■■□□ 2.18
LDB1-204ENST00000490751 C1orf109Q9NX04 203 aa28.65■■■□□ 2.18
LDB1-204ENST00000490751 TAS2R9Q9NYW1 312 aa28.65■■■□□ 2.18
LDB1-204ENST00000490751 SLC17A7Q9P2U7 560 aa28.65■■■□□ 2.18
LDB1-204ENST00000490751 Q9UFV3 132 aa28.65■■■□□ 2.18
LDB1-204ENST00000490751 SLC6A5Q9Y345 797 aa28.65■■■□□ 2.18
LDB1-204ENST00000490751 ADGRG4Q8IZF6 3080 aa28.65■■■□□ 2.18
LDB1-204ENST00000490751 NPIPB8E9PQR5 432 aa28.64■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms