RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 MRPS2Q9Y399 296 aaKnown RBP3.79□□□□□ -1.8
HMGB1P38-201ENST00000490557 HCFC1P51610 2035 aa3.78□□□□□ -1.8
HMGB1P38-201ENST00000490557 KIF7Q2M1P5 1343 aa3.78□□□□□ -1.8
HMGB1P38-201ENST00000490557 FAM205AQ6ZU69 1335 aa3.78□□□□□ -1.8
HMGB1P38-201ENST00000490557 CTAGE15A4D2H0 777 aa3.78□□□□□ -1.8
HMGB1P38-201ENST00000490557 ANGPT2O15123 496 aa3.78□□□□□ -1.8
HMGB1P38-201ENST00000490557 TSPAN2O60636 221 aa3.78□□□□□ -1.8
HMGB1P38-201ENST00000490557 KBTBD11O94819 623 aa3.78□□□□□ -1.8
HMGB1P38-201ENST00000490557 DIRAS3O95661 229 aa3.78□□□□□ -1.8
HMGB1P38-201ENST00000490557 FCER2P06734 321 aa3.78□□□□□ -1.8
HMGB1P38-201ENST00000490557 GZMAP12544 262 aa3.78□□□□□ -1.8
HMGB1P38-201ENST00000490557 CHRNA3P32297 505 aa3.78□□□□□ -1.8
HMGB1P38-201ENST00000490557 HSPA1LP34931 641 aa3.78□□□□□ -1.8
HMGB1P38-201ENST00000490557 PITPNBP48739 271 aa3.78□□□□□ -1.8
HMGB1P38-201ENST00000490557 HMGCS2P54868 508 aa3.78□□□□□ -1.8
HMGB1P38-201ENST00000490557 GBE1Q04446 702 aa3.78□□□□□ -1.8
HMGB1P38-201ENST00000490557 PPP1R8Q12972 351 aaKnown RBP3.78□□□□□ -1.8
HMGB1P38-201ENST00000490557 PDE7AQ13946 482 aa3.78□□□□□ -1.8
HMGB1P38-201ENST00000490557 DPYSQ14117 519 aa3.78□□□□□ -1.8
HMGB1P38-201ENST00000490557 CCL14Q16627 93 aa3.78□□□□□ -1.8
HMGB1P38-201ENST00000490557 ANKRD55Q3KP44 614 aa3.78□□□□□ -1.8
HMGB1P38-201ENST00000490557 SLC22A6Q4U2R8 563 aa3.78□□□□□ -1.8
HMGB1P38-201ENST00000490557 C14orf28Q4W4Y0 310 aa3.78□□□□□ -1.8
HMGB1P38-201ENST00000490557 HIST2H2AA3Q6FI13 130 aa3.78□□□□□ -1.8
HMGB1P38-201ENST00000490557 CENPPQ6IPU0 288 aa3.78□□□□□ -1.8
HMGB1P38-201ENST00000490557 AFTPHQ6ULP2 937 aa3.78□□□□□ -1.8
HMGB1P38-201ENST00000490557 VITQ6UXI7 678 aa3.78□□□□□ -1.8
HMGB1P38-201ENST00000490557 CTAGE6Q86UF2 777 aa3.78□□□□□ -1.8
HMGB1P38-201ENST00000490557 IQCF2Q8IXL9 164 aa3.78□□□□□ -1.8
HMGB1P38-201ENST00000490557 RELL2Q8NC24 303 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P38-201ENST00000490557 OR6T1Q8NGN1 323 aa3.78□□□□□ -1.8
HMGB1P38-201ENST00000490557 OR4F5Q8NH21 305 aa3.78□□□□□ -1.8
HMGB1P38-201ENST00000490557 TBCKQ8TEA7 893 aa3.78□□□□□ -1.8
HMGB1P38-201ENST00000490557 ANKRD49Q8WVL7 239 aa3.78□□□□□ -1.8
HMGB1P38-201ENST00000490557 PNPLA2Q96AD5 504 aa3.78□□□□□ -1.8
HMGB1P38-201ENST00000490557 MRPL53Q96EL3 112 aaKnown RBP3.78□□□□□ -1.8
HMGB1P38-201ENST00000490557 ZBED6CLQ96FA7 236 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P38-201ENST00000490557 ERP44Q9BS26 406 aa3.78□□□□□ -1.8
HMGB1P38-201ENST00000490557 TRPV6Q9H1D0 765 aa3.78□□□□□ -1.8
HMGB1P38-201ENST00000490557 COQ10BQ9H8M1 238 aa3.78□□□□□ -1.8
HMGB1P38-201ENST00000490557 Q9HAA7 133 aa3.78□□□□□ -1.8
HMGB1P38-201ENST00000490557 FAM120CQ9NX05 1096 aaKnown RBP3.78□□□□□ -1.8
HMGB1P38-201ENST00000490557 SOHLH2Q9NX45 425 aa3.78□□□□□ -1.8
HMGB1P38-201ENST00000490557 CLIP2Q9UDT6 1046 aa3.78□□□□□ -1.8
HMGB1P38-201ENST00000490557 FAM153AQ9UHL3 310 aa3.78□□□□□ -1.8
HMGB1P38-201ENST00000490557 ZNF107Q9UII5 783 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P38-201ENST00000490557 CFAP45Q9UL16 551 aa3.78□□□□□ -1.8
HMGB1P38-201ENST00000490557 TP53BP1Q12888 1972 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P38-201ENST00000490557 TRAV9-2A0A087WT02 112 aa3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 ARPC4-TTLL3A0A0A6YYG9 625 aa3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 ZSCAN5CA6NGD5 496 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 MAGEB3O15480 346 aa3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 CFLARO15519 480 aa3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 RHBDL1O75783 438 aa3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 PTBP3O95758 552 aaKnown RBP3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 NUDT14O95848 222 aa3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 TGFAP01135 160 aa3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 IGKV3-15P01624 115 aa3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 PIGRP01833 764 aa3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 ABHD2P08910 425 aa3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 HIST1H2AGP0C0S8 130 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 SFNP31947 248 aa3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 MDH1P40925 334 aaKnown RBP3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 TSTA3Q13630 321 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 KLF5Q13887 457 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 EXOSC7Q15024 291 aaKnown RBP3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 HAGHQ16775 308 aa3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 LRRC23Q53EV4 343 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 CAVIN4Q5BKX8 364 aa3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 ATAD3CQ5T2N8 411 aa3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 RIPPLY2Q5TAB7 128 aa3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 NKAIN2Q5VXU1 208 aa3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 NEK5Q6P3R8 708 aa3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 APOOLQ6UXV4 268 aa3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 BAIAP2L2Q6UXY1 529 aa3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 LUZP1Q86V48 1076 aa3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 ZNF410Q86VK4 478 aa3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 ZBED8Q8IZ13 594 aa3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 ELMOD2Q8IZ81 293 aa3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 SLC22A18ASQ8N1D0 253 aa3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 BATF2Q8N1L9 274 aa3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 LEMD2Q8NC56 503 aa3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 HIST1H2ACQ93077 130 aa3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 RAB39BQ96DA2 213 aa3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 DTNBP1Q96EV8 351 aa3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 NAP1L3Q99457 506 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 TBCDQ9BTW9 1192 aa3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 RPAP3Q9H6T3 665 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 AMBNQ9NP70 447 aa3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 NGBQ9NPG2 151 aa3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 PRMT8Q9NR22 394 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 CENPMQ9NSP4 180 aa3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 DDX18Q9NVP1 670 aaKnown RBP3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 C6orf203Q9P0P8 240 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 DHRS4-AS1Q9P1J3 65 aa3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 ANKMY1Q9P2S6 941 aa3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 TUBGCP4Q9UGJ1 667 aa3.77□□□□□ -1.81
HMGB1P38-201ENST00000490557 RNF24Q9Y225 148 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms