RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 PARVBQ9HBI1 364 aa6.32□□□□□ -1.4
PDLIM1-203ENST00000490391 GALNT9Q9HCQ5 603 aa6.32□□□□□ -1.4
PDLIM1-203ENST00000490391 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.32□□□□□ -1.4
PDLIM1-203ENST00000490391 FAM53CQ9NYF3 392 aa6.32□□□□□ -1.4
PDLIM1-203ENST00000490391 TAS2R10Q9NYW0 307 aa6.32□□□□□ -1.4
PDLIM1-203ENST00000490391 ERVK-19Q9WJR5 959 aa6.32□□□□□ -1.4
PDLIM1-203ENST00000490391 DHRS7Q9Y394 339 aa6.32□□□□□ -1.4
PDLIM1-203ENST00000490391 ZNF175Q9Y473 711 aa6.32□□□□□ -1.4
PDLIM1-203ENST00000490391 WNK2Q9Y3S1 2297 aa6.32□□□□□ -1.4
PDLIM1-203ENST00000490391 GOLGA6L9A6NEM1 432 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 POM121CA8CG34 1229 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 TRIM77I1YAP6 450 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 SMAD9O15198 467 aaKnown RBP6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 ZIC3O60481 467 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 ICOSLGO75144 302 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 CDH16O75309 829 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 TNFRSF21O75509 655 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 GCM2O75603 506 aaPredicted RBP6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 ZNF189O75820 626 aaPredicted RBP6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 VAPBO95292 243 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 GAS8O95995 478 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 FESP07332 822 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 ABCB1P08183 1280 aaPredicted RBP6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 ZNF23P17027 643 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 OGNP20774 298 aaKnown RBP6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 IL11P20809 199 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 SRD5A2P31213 254 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 TTKP33981 857 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 TMED10P49755 219 aaKnown RBP6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 EFNA4P52798 201 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 CDH11P55287 796 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 SP140Q13342 867 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 RCN2Q14257 317 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 NR1I3Q14994 352 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 DUPD1Q68J44 220 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 SLC30A6Q6NXT4 461 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 NXPE4Q6UWF7 544 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 PPP1R21Q6ZMI0 780 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 RNF111Q6ZNA4 994 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 VN1R5Q7Z5H4 357 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 SDCCAG8Q86SQ7 713 aaPredicted RBP6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 OR4N5Q8IXE1 308 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 UBQLNLQ8IYU4 475 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 PRR22Q8IZ63 422 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 OTUD6BQ8N6M0 293 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 SNX31Q8N9S9 440 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 OR2L5Q8NG80 312 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 HGDQ93099 445 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 MRPL24Q96A35 216 aaKnown RBP6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 C3orf49Q96BT1 292 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 MFSD3Q96ES6 412 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 MISP3Q96FF7 219 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 DGAT2Q96PD7 388 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 NODALQ96S42 347 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 HBEGFQ99075 208 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 GPR21Q99679 349 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 PKP2Q99959 881 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 MAPKAP1Q9BPZ7 522 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 AIF1LQ9BQI0 150 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 PINK1Q9BXM7 581 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 OSBPL8Q9BZF1 889 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 METTL17Q9H7H0 456 aaPredicted RBP6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 PRDM7Q9NQW5 492 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 SNX15Q9NRS6 342 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 CBLN4Q9NTU7 201 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 SYBUQ9NX95 663 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 FBXL2Q9UKC9 423 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 CAPN11Q9UMQ6 739 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 PCNX3Q9H6A9 2034 aa6.31□□□□□ -1.4
PDLIM1-203ENST00000490391 A0A088AWK7 358 aa6.3□□□□□ -1.4
PDLIM1-203ENST00000490391 GOLGA8QA0A0J9YX86 632 aa6.3□□□□□ -1.4
PDLIM1-203ENST00000490391 IQANK1A0A1B0GTG1 560 aa6.3□□□□□ -1.4
PDLIM1-203ENST00000490391 C2orf92A0A1B0GVN3 265 aa6.3□□□□□ -1.4
PDLIM1-203ENST00000490391 GOLGA8OA6NCC3 632 aa6.3□□□□□ -1.4
PDLIM1-203ENST00000490391 OR6C76A6NM76 312 aa6.3□□□□□ -1.4
PDLIM1-203ENST00000490391 E7EQL1 145 aa6.3□□□□□ -1.4
PDLIM1-203ENST00000490391 GOLGA8NF8WBI6 632 aa6.3□□□□□ -1.4
PDLIM1-203ENST00000490391 GOLGA8RI6L899 631 aa6.3□□□□□ -1.4
PDLIM1-203ENST00000490391 NDUFS8O00217 210 aa6.3□□□□□ -1.4
PDLIM1-203ENST00000490391 CDC7O00311 574 aa6.3□□□□□ -1.4
PDLIM1-203ENST00000490391 AIFM1O95831 613 aa6.3□□□□□ -1.4
PDLIM1-203ENST00000490391 GYPCP04921 128 aa6.3□□□□□ -1.4
PDLIM1-203ENST00000490391 C8GP07360 202 aa6.3□□□□□ -1.4
PDLIM1-203ENST00000490391 ZNF10P21506 573 aaPredicted RBP6.3□□□□□ -1.4
PDLIM1-203ENST00000490391 ABCD3P28288 659 aa6.3□□□□□ -1.4
PDLIM1-203ENST00000490391 IL2RGP31785 369 aa6.3□□□□□ -1.4
PDLIM1-203ENST00000490391 RPP38P78345 283 aaKnown RBP6.3□□□□□ -1.4
PDLIM1-203ENST00000490391 IRF9Q00978 393 aa6.3□□□□□ -1.4
PDLIM1-203ENST00000490391 PLIN5Q00G26 463 aa6.3□□□□□ -1.4
PDLIM1-203ENST00000490391 TIAL1Q01085 375 aaKnown RBP eCLIP6.3□□□□□ -1.4
PDLIM1-203ENST00000490391 KIF5AQ12840 1032 aa6.3□□□□□ -1.4
PDLIM1-203ENST00000490391 DOC2AQ14183 400 aa6.3□□□□□ -1.4
PDLIM1-203ENST00000490391 ZNF267Q14586 743 aaPredicted RBP6.3□□□□□ -1.4
PDLIM1-203ENST00000490391 PON3Q15166 354 aa6.3□□□□□ -1.4
PDLIM1-203ENST00000490391 RBBP5Q15291 538 aaKnown RBP6.3□□□□□ -1.4
PDLIM1-203ENST00000490391 TSC22D1Q15714 1073 aa6.3□□□□□ -1.4
PDLIM1-203ENST00000490391 ZSWIM7Q19AV6 140 aa6.3□□□□□ -1.4
PDLIM1-203ENST00000490391 ADNP2Q6IQ32 1131 aa6.3□□□□□ -1.4
PDLIM1-203ENST00000490391 CASC4Q6P4E1 433 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms