RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 PTGR1Q14914 329 aa15.95■□□□□ 0.14
MDC1-206ENST00000489540 NNATQ16517 81 aa15.95■□□□□ 0.14
MDC1-206ENST00000489540 HYAL4Q2M3T9 481 aa15.95■□□□□ 0.14
MDC1-206ENST00000489540 CPTPQ5TA50 214 aa15.95■□□□□ 0.14
MDC1-206ENST00000489540 ZNF551Q7Z340 670 aaPredicted RBP15.95■□□□□ 0.14
MDC1-206ENST00000489540 PRR22Q8IZ63 422 aa15.95■□□□□ 0.14
MDC1-206ENST00000489540 ZNF75CPQ92670 426 aaPredicted RBP15.95■□□□□ 0.14
MDC1-206ENST00000489540 DIO2Q92813 273 aa15.95■□□□□ 0.14
MDC1-206ENST00000489540 COQ8BQ96D53 544 aa15.95■□□□□ 0.14
MDC1-206ENST00000489540 OMA1Q96E52 524 aa15.95■□□□□ 0.14
MDC1-206ENST00000489540 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.95■□□□□ 0.14
MDC1-206ENST00000489540 POLEQ07864 2286 aa15.95■□□□□ 0.14
MDC1-206ENST00000489540 A0A0G2JMM0 328 aa15.94■□□□□ 0.14
MDC1-206ENST00000489540 A0A1B0GUH1 482 aa15.94■□□□□ 0.14
MDC1-206ENST00000489540 A0A1W2PPB8 328 aa15.94■□□□□ 0.14
MDC1-206ENST00000489540 A0A1W2PRS3 328 aa15.94■□□□□ 0.14
MDC1-206ENST00000489540 TTC36A6NLP5 189 aa15.94■□□□□ 0.14
MDC1-206ENST00000489540 TRPC5OSA6NMA1 111 aa15.94■□□□□ 0.14
MDC1-206ENST00000489540 KIR3DP1A8MWS1 328 aa15.94■□□□□ 0.14
MDC1-206ENST00000489540 HDAC3O15379 428 aa15.94■□□□□ 0.14
MDC1-206ENST00000489540 HS6ST1O60243 411 aa15.94■□□□□ 0.14
MDC1-206ENST00000489540 SEMA7AO75326 666 aa15.94■□□□□ 0.14
MDC1-206ENST00000489540 SNX4O95219 450 aa15.94■□□□□ 0.14
MDC1-206ENST00000489540 ZIC2O95409 532 aaPredicted RBP15.94■□□□□ 0.14
MDC1-206ENST00000489540 CT45A8P0DMV1 189 aa15.94■□□□□ 0.14
MDC1-206ENST00000489540 CT45A9P0DMV2 189 aa15.94■□□□□ 0.14
MDC1-206ENST00000489540 DNASE1L1P49184 302 aa15.94■□□□□ 0.14
MDC1-206ENST00000489540 KCNJ2P63252 427 aa15.94■□□□□ 0.14
MDC1-206ENST00000489540 FOXO1Q12778 655 aa15.94■□□□□ 0.14
MDC1-206ENST00000489540 HSPB3Q12988 150 aa15.94■□□□□ 0.14
MDC1-206ENST00000489540 MLC1Q15049 377 aa15.94■□□□□ 0.14
MDC1-206ENST00000489540 ZNHIT3Q15649 155 aaPredicted RBP15.94■□□□□ 0.14
MDC1-206ENST00000489540 CT45A2Q5DJT8 189 aa15.94■□□□□ 0.14
MDC1-206ENST00000489540 PRAMEF20Q5VT98 475 aa15.94■□□□□ 0.14
MDC1-206ENST00000489540 PAOXQ6QHF9 649 aa15.94■□□□□ 0.14
MDC1-206ENST00000489540 RIMKLAQ8IXN7 391 aa15.94■□□□□ 0.14
MDC1-206ENST00000489540 SLC34A3Q8N130 599 aa15.94■□□□□ 0.14
MDC1-206ENST00000489540 OR7A2PQ8NGA2 310 aa15.94■□□□□ 0.14
MDC1-206ENST00000489540 CEP70Q8NHQ1 597 aa15.94■□□□□ 0.14
MDC1-206ENST00000489540 MAGED4Q96JG8 741 aa15.94■□□□□ 0.14
MDC1-206ENST00000489540 TTTY12Q9BZ98 90 aa15.94■□□□□ 0.14
MDC1-206ENST00000489540 BOKQ9UMX3 212 aaPredicted RBP15.94■□□□□ 0.14
MDC1-206ENST00000489540 UBR5O95071 2799 aaPredicted RBP15.94■□□□□ 0.14
MDC1-206ENST00000489540 A0A1W2PRB8 838 aa15.94■□□□□ 0.14
MDC1-206ENST00000489540 ABCB7O75027 752 aa15.94■□□□□ 0.14
MDC1-206ENST00000489540 PSMG1O95456 288 aa15.94■□□□□ 0.14
MDC1-206ENST00000489540 LAMP1P11279 417 aa15.94■□□□□ 0.14
MDC1-206ENST00000489540 KRT20P35900 424 aa15.94■□□□□ 0.14
MDC1-206ENST00000489540 CASP6P55212 293 aa15.94■□□□□ 0.14
MDC1-206ENST00000489540 C4orf17Q53FE4 359 aa15.94■□□□□ 0.14
MDC1-206ENST00000489540 CMPK2Q5EBM0 449 aa15.94■□□□□ 0.14
MDC1-206ENST00000489540 TMEM198Q66K66 360 aa15.94■□□□□ 0.14
MDC1-206ENST00000489540 LARP4Q71RC2 724 aaKnown RBP eCLIP15.94■□□□□ 0.14
MDC1-206ENST00000489540 SPPL2CQ8IUH8 684 aa15.94■□□□□ 0.14
MDC1-206ENST00000489540 SLC44A2Q8IWA5 706 aaPredicted RBP15.94■□□□□ 0.14
MDC1-206ENST00000489540 KRTCAP2Q8N6L1 136 aa15.94■□□□□ 0.14
MDC1-206ENST00000489540 TMBIM1Q969X1 311 aa15.94■□□□□ 0.14
MDC1-206ENST00000489540 DOHHQ9BU89 302 aa15.94■□□□□ 0.14
MDC1-206ENST00000489540 ANGPTL4Q9BY76 406 aa15.94■□□□□ 0.14
MDC1-206ENST00000489540 C3orf14Q9HBI5 128 aa15.94■□□□□ 0.14
MDC1-206ENST00000489540 PROK2Q9HC23 129 aa15.94■□□□□ 0.14
MDC1-206ENST00000489540 ZFP64Q9NPA5 681 aa15.94■□□□□ 0.14
MDC1-206ENST00000489540 TUBA8Q9NY65 449 aaPredicted RBP15.94■□□□□ 0.14
MDC1-206ENST00000489540 NTMQ9P121 344 aa15.94■□□□□ 0.14
MDC1-206ENST00000489540 ZNF835Q9Y2P0 537 aa15.94■□□□□ 0.14
MDC1-206ENST00000489540 OR6C70A6NIJ9 312 aa15.93■□□□□ 0.14
MDC1-206ENST00000489540 FAM166BA8MTA8 275 aa15.93■□□□□ 0.14
MDC1-206ENST00000489540 LRRTM2O43300 516 aa15.93■□□□□ 0.14
MDC1-206ENST00000489540 SLC19A2O60779 497 aa15.93■□□□□ 0.14
MDC1-206ENST00000489540 NME6O75414 186 aaPredicted RBP15.93■□□□□ 0.14
MDC1-206ENST00000489540 REM1O75628 298 aa15.93■□□□□ 0.14
MDC1-206ENST00000489540 KITP10721 976 aa15.93■□□□□ 0.14
MDC1-206ENST00000489540 CASP3P42574 277 aa15.93■□□□□ 0.14
MDC1-206ENST00000489540 DIO3P55073 304 aa15.93■□□□□ 0.14
MDC1-206ENST00000489540 CORO7P57737 925 aa15.93■□□□□ 0.14
MDC1-206ENST00000489540 MRPS22P82650 360 aaKnown RBP15.93■□□□□ 0.14
MDC1-206ENST00000489540 PSG6Q00889 435 aa15.93■□□□□ 0.14
MDC1-206ENST00000489540 ZNF155Q12901 538 aaPredicted RBP15.93■□□□□ 0.14
MDC1-206ENST00000489540 LSM12Q3MHD2 195 aaKnown RBP15.93■□□□□ 0.14
MDC1-206ENST00000489540 CYP27C1Q4G0S4 372 aa15.93■□□□□ 0.14
MDC1-206ENST00000489540 OGFOD2Q6N063 350 aa15.93■□□□□ 0.14
MDC1-206ENST00000489540 TMEM81Q6P7N7 255 aa15.93■□□□□ 0.14
MDC1-206ENST00000489540 PACS2Q86VP3 889 aa15.93■□□□□ 0.14
MDC1-206ENST00000489540 WDR75Q8IWA0 830 aaKnown RBP15.93■□□□□ 0.14
MDC1-206ENST00000489540 FAM109AQ8N4B1 249 aa15.93■□□□□ 0.14
MDC1-206ENST00000489540 TMEM251Q8N6I4 163 aa15.93■□□□□ 0.14
MDC1-206ENST00000489540 OR52N2Q8NGI0 321 aa15.93■□□□□ 0.14
MDC1-206ENST00000489540 OR5P2Q8WZ92 322 aa15.93■□□□□ 0.14
MDC1-206ENST00000489540 HGDQ93099 445 aa15.93■□□□□ 0.14
MDC1-206ENST00000489540 RELTQ969Z4 430 aa15.93■□□□□ 0.14
MDC1-206ENST00000489540 TMCO6Q96DC7 493 aa15.93■□□□□ 0.14
MDC1-206ENST00000489540 COL21A1Q96P44 957 aa15.93■□□□□ 0.14
MDC1-206ENST00000489540 BHLHE41Q9C0J9 482 aaPredicted RBP15.93■□□□□ 0.14
MDC1-206ENST00000489540 DEFB127Q9H1M4 99 aa15.93■□□□□ 0.14
MDC1-206ENST00000489540 ACBD3Q9H3P7 528 aa15.93■□□□□ 0.14
MDC1-206ENST00000489540 ZDHHC11Q9H8X9 412 aa15.93■□□□□ 0.14
MDC1-206ENST00000489540 ERRFI1Q9UJM3 462 aaPredicted RBP15.93■□□□□ 0.14
MDC1-206ENST00000489540 OR10H1Q9Y4A9 318 aa15.93■□□□□ 0.14
MDC1-206ENST00000489540 PRRC2CQ9Y520 2896 aaKnown RBP15.92■□□□□ 0.14
MDC1-206ENST00000489540 RELNP78509 3460 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms