RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 AGR3Q8TD06 166 aa12.4□□□□□ -0.42
LMO4-203ENST00000489303 SARAFQ96BY9 339 aa12.4□□□□□ -0.42
LMO4-203ENST00000489303 TMCO6Q96DC7 493 aa12.4□□□□□ -0.42
LMO4-203ENST00000489303 OMA1Q96E52 524 aa12.4□□□□□ -0.42
LMO4-203ENST00000489303 PPP3R2Q96LZ3 170 aa12.4□□□□□ -0.42
LMO4-203ENST00000489303 ZIM3Q96PE6 472 aa12.4□□□□□ -0.42
LMO4-203ENST00000489303 TP63Q9H3D4 680 aaPredicted RBP12.4□□□□□ -0.42
LMO4-203ENST00000489303 TUBB1Q9H4B7 451 aa12.4□□□□□ -0.42
LMO4-203ENST00000489303 METTL7AQ9H8H3 244 aa12.4□□□□□ -0.42
LMO4-203ENST00000489303 KCNK9Q9NPC2 374 aa12.4□□□□□ -0.42
LMO4-203ENST00000489303 QPCTLQ9NXS2 382 aa12.4□□□□□ -0.42
LMO4-203ENST00000489303 DTX4Q9Y2E6 619 aa12.4□□□□□ -0.42
LMO4-203ENST00000489303 ACTL7BQ9Y614 415 aa12.4□□□□□ -0.42
LMO4-203ENST00000489303 A0A087WV62 115 aa12.39□□□□□ -0.43
LMO4-203ENST00000489303 TRGV5A0A0B4J1U4 118 aa12.39□□□□□ -0.43
LMO4-203ENST00000489303 WDR91A4D1P6 747 aa12.39□□□□□ -0.43
LMO4-203ENST00000489303 TMEM233B4DJY2 109 aa12.39□□□□□ -0.43
LMO4-203ENST00000489303 NPIPA2E9PIF3 369 aa12.39□□□□□ -0.43
LMO4-203ENST00000489303 NPIPA3F8WFD2 350 aa12.39□□□□□ -0.43
LMO4-203ENST00000489303 C19orf84I3L1E1 186 aa12.39□□□□□ -0.43
LMO4-203ENST00000489303 PIP5K1BO14986 540 aa12.39□□□□□ -0.43
LMO4-203ENST00000489303 LSM1O15116 133 aaKnown RBP12.39□□□□□ -0.43
LMO4-203ENST00000489303 TO15178 435 aa12.39□□□□□ -0.43
LMO4-203ENST00000489303 BIRC5O15392 142 aa12.39□□□□□ -0.43
LMO4-203ENST00000489303 PDPK1O15530 556 aa12.39□□□□□ -0.43
LMO4-203ENST00000489303 SUSD5O60279 629 aa12.39□□□□□ -0.43
LMO4-203ENST00000489303 ERN1O75460 977 aaKnown RBP12.39□□□□□ -0.43
LMO4-203ENST00000489303 REM1O75628 298 aa12.39□□□□□ -0.43
LMO4-203ENST00000489303 ZWINTO95229 277 aa12.39□□□□□ -0.43
LMO4-203ENST00000489303 LRATO95237 230 aa12.39□□□□□ -0.43
LMO4-203ENST00000489303 IGHG3P01860 377 aa12.39□□□□□ -0.43
LMO4-203ENST00000489303 ABCB1P08183 1280 aaPredicted RBP12.39□□□□□ -0.43
LMO4-203ENST00000489303 AGAP20933 346 aa12.39□□□□□ -0.43
LMO4-203ENST00000489303 GDF1P27539 372 aa12.39□□□□□ -0.43
LMO4-203ENST00000489303 CASP3P42574 277 aa12.39□□□□□ -0.43
LMO4-203ENST00000489303 ETV4P43268 484 aa12.39□□□□□ -0.43
LMO4-203ENST00000489303 ASMTP46597 345 aa12.39□□□□□ -0.43
LMO4-203ENST00000489303 MRPS22P82650 360 aaKnown RBP12.39□□□□□ -0.43
LMO4-203ENST00000489303 DUSP8Q13202 625 aa12.39□□□□□ -0.43
LMO4-203ENST00000489303 ATP6AP1LQ52LC2 224 aa12.39□□□□□ -0.43
LMO4-203ENST00000489303 TRILQ7L0X0 811 aa12.39□□□□□ -0.43
LMO4-203ENST00000489303 R3HCC1LQ7Z5L2 792 aaKnown RBP12.39□□□□□ -0.43
LMO4-203ENST00000489303 FGD2Q7Z6J4 655 aa12.39□□□□□ -0.43
LMO4-203ENST00000489303 EXOC3L1Q86VI1 746 aa12.39□□□□□ -0.43
LMO4-203ENST00000489303 CHERPQ8IWX8 916 aaKnown RBP12.39□□□□□ -0.43
LMO4-203ENST00000489303 OR2T11Q8NH01 316 aa12.39□□□□□ -0.43
LMO4-203ENST00000489303 ZFP28Q8NHY6 868 aa12.39□□□□□ -0.43
LMO4-203ENST00000489303 PHF10Q8WUB8 498 aaKnown RBP12.39□□□□□ -0.43
LMO4-203ENST00000489303 GFM2Q969S9 779 aaKnown RBP12.39□□□□□ -0.43
LMO4-203ENST00000489303 PPCDCQ96CD2 204 aa12.39□□□□□ -0.43
LMO4-203ENST00000489303 RILPQ96NA2 401 aa12.39□□□□□ -0.43
LMO4-203ENST00000489303 TSSK3Q96PN8 268 aa12.39□□□□□ -0.43
LMO4-203ENST00000489303 BTBD9Q96Q07 612 aa12.39□□□□□ -0.43
LMO4-203ENST00000489303 PHF12Q96QT6 1004 aa12.39□□□□□ -0.43
LMO4-203ENST00000489303 ANGPTL4Q9BY76 406 aa12.39□□□□□ -0.43
LMO4-203ENST00000489303 REEP4Q9H6H4 257 aa12.39□□□□□ -0.43
LMO4-203ENST00000489303 DDX18Q9NVP1 670 aaKnown RBP12.39□□□□□ -0.43
LMO4-203ENST00000489303 COQ3Q9NZJ6 369 aa12.39□□□□□ -0.43
LMO4-203ENST00000489303 ACAD8Q9UKU7 415 aa12.39□□□□□ -0.43
LMO4-203ENST00000489303 GPR55Q9Y2T6 319 aaPredicted RBP12.39□□□□□ -0.43
LMO4-203ENST00000489303 OR10H1Q9Y4A9 318 aa12.39□□□□□ -0.43
LMO4-203ENST00000489303 KLF2Q9Y5W3 355 aaPredicted RBP12.39□□□□□ -0.43
LMO4-203ENST00000489303 A0A1B0GVC2 190 aa12.38□□□□□ -0.43
LMO4-203ENST00000489303 FIGNL2A6NMB9 653 aa12.38□□□□□ -0.43
LMO4-203ENST00000489303 AQP7O14520 342 aa12.38□□□□□ -0.43
LMO4-203ENST00000489303 AKAP10O43572 662 aa12.38□□□□□ -0.43
LMO4-203ENST00000489303 TRIM3O75382 744 aaPredicted RBP12.38□□□□□ -0.43
LMO4-203ENST00000489303 SNUPNO95149 360 aaKnown RBP12.38□□□□□ -0.43
LMO4-203ENST00000489303 SERPINE1P05121 402 aa12.38□□□□□ -0.43
LMO4-203ENST00000489303 SDC1P18827 310 aa12.38□□□□□ -0.43
LMO4-203ENST00000489303 TACR1P25103 407 aa12.38□□□□□ -0.43
LMO4-203ENST00000489303 IL12BP29460 328 aa12.38□□□□□ -0.43
LMO4-203ENST00000489303 GPC1P35052 558 aa12.38□□□□□ -0.43
LMO4-203ENST00000489303 RPL3P39023 403 aaKnown RBP12.38□□□□□ -0.43
LMO4-203ENST00000489303 MC3RP41968 323 aa12.38□□□□□ -0.43
LMO4-203ENST00000489303 ZNF155Q12901 538 aaPredicted RBP12.38□□□□□ -0.43
LMO4-203ENST00000489303 SNTA1Q13424 505 aa12.38□□□□□ -0.43
LMO4-203ENST00000489303 EFR3AQ14156 821 aa12.38□□□□□ -0.43
LMO4-203ENST00000489303 ZNHIT3Q15649 155 aaPredicted RBP12.38□□□□□ -0.43
LMO4-203ENST00000489303 CHI3L2Q15782 390 aa12.38□□□□□ -0.43
LMO4-203ENST00000489303 UGT3A2Q3SY77 523 aa12.38□□□□□ -0.43
LMO4-203ENST00000489303 GXYLT1Q4G148 440 aa12.38□□□□□ -0.43
LMO4-203ENST00000489303 RFTN2Q52LD8 501 aaPredicted RBP12.38□□□□□ -0.43
LMO4-203ENST00000489303 WLSQ5T9L3 541 aa12.38□□□□□ -0.43
LMO4-203ENST00000489303 SLC30A6Q6NXT4 461 aa12.38□□□□□ -0.43
LMO4-203ENST00000489303 TMEM107Q6UX40 140 aa12.38□□□□□ -0.43
LMO4-203ENST00000489303 C3P1Q6ZMU1 363 aa12.38□□□□□ -0.43
LMO4-203ENST00000489303 KIRREL3Q8IZU9 778 aa12.38□□□□□ -0.43
LMO4-203ENST00000489303 SIMC1Q8NDZ2 872 aa12.38□□□□□ -0.43
LMO4-203ENST00000489303 OR7G2Q8NG99 324 aa12.38□□□□□ -0.43
LMO4-203ENST00000489303 DTNBP1Q96EV8 351 aa12.38□□□□□ -0.43
LMO4-203ENST00000489303 ZBED6CLQ96FA7 236 aaPredicted RBP12.38□□□□□ -0.43
LMO4-203ENST00000489303 PGM2Q96G03 612 aa12.38□□□□□ -0.43
LMO4-203ENST00000489303 PKNOX2Q96KN3 472 aa12.38□□□□□ -0.43
LMO4-203ENST00000489303 EGLN2Q96KS0 407 aa12.38□□□□□ -0.43
LMO4-203ENST00000489303 FCRL1Q96LA6 429 aa12.38□□□□□ -0.43
LMO4-203ENST00000489303 AMDHD1Q96NU7 426 aa12.38□□□□□ -0.43
LMO4-203ENST00000489303 COL21A1Q96P44 957 aa12.38□□□□□ -0.43
LMO4-203ENST00000489303 GLIPR2Q9H4G4 154 aa12.38□□□□□ -0.43
LMO4-203ENST00000489303 ZNF703Q9H7S9 590 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms