RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 HSF1Q00613 529 aa13.13□□□□□ -0.31
BRCA1-218ENST00000489037 ZNF155Q12901 538 aaPredicted RBP13.13□□□□□ -0.31
BRCA1-218ENST00000489037 ZNHIT3Q15649 155 aaPredicted RBP13.13□□□□□ -0.31
BRCA1-218ENST00000489037 C3AR1Q16581 482 aa13.13□□□□□ -0.31
BRCA1-218ENST00000489037 HYAL4Q2M3T9 481 aa13.13□□□□□ -0.31
BRCA1-218ENST00000489037 XKR7Q5GH72 579 aa13.13□□□□□ -0.31
BRCA1-218ENST00000489037 TMEM107Q6UX40 140 aa13.13□□□□□ -0.31
BRCA1-218ENST00000489037 SLC34A3Q8N130 599 aa13.13□□□□□ -0.31
BRCA1-218ENST00000489037 TMEM251Q8N6I4 163 aa13.13□□□□□ -0.31
BRCA1-218ENST00000489037 CLHC1Q8NHS4 586 aa13.13□□□□□ -0.31
BRCA1-218ENST00000489037 SPPL2AQ8TCT8 520 aa13.13□□□□□ -0.31
BRCA1-218ENST00000489037 OMA1Q96E52 524 aa13.13□□□□□ -0.31
BRCA1-218ENST00000489037 ZBED6CLQ96FA7 236 aaPredicted RBP13.13□□□□□ -0.31
BRCA1-218ENST00000489037 ZNF764Q96H86 408 aaPredicted RBP13.13□□□□□ -0.31
BRCA1-218ENST00000489037 ZNF597Q96LX8 424 aa13.13□□□□□ -0.31
BRCA1-218ENST00000489037 AMDHD1Q96NU7 426 aa13.13□□□□□ -0.31
BRCA1-218ENST00000489037 PRPF18Q99633 342 aaKnown RBP13.13□□□□□ -0.31
BRCA1-218ENST00000489037 GLIPR2Q9H4G4 154 aa13.13□□□□□ -0.31
BRCA1-218ENST00000489037 METTL7AQ9H8H3 244 aa13.13□□□□□ -0.31
BRCA1-218ENST00000489037 TMBIM4Q9HC24 238 aa13.13□□□□□ -0.31
BRCA1-218ENST00000489037 DDX18Q9NVP1 670 aaKnown RBP13.13□□□□□ -0.31
BRCA1-218ENST00000489037 ARGLU1Q9NWB6 273 aaPredicted RBP13.13□□□□□ -0.31
BRCA1-218ENST00000489037 BAIAP2L1Q9UHR4 511 aa13.13□□□□□ -0.31
BRCA1-218ENST00000489037 CNOT11Q9UKZ1 510 aaKnown RBP13.13□□□□□ -0.31
BRCA1-218ENST00000489037 GPR55Q9Y2T6 319 aaPredicted RBP13.13□□□□□ -0.31
BRCA1-218ENST00000489037 OR10H1Q9Y4A9 318 aa13.13□□□□□ -0.31
BRCA1-218ENST00000489037 TMEM120BA0PK00 339 aa13.12□□□□□ -0.31
BRCA1-218ENST00000489037 A1L4Q6 167 aa13.12□□□□□ -0.31
BRCA1-218ENST00000489037 PLOD2O00469 737 aa13.12□□□□□ -0.31
BRCA1-218ENST00000489037 TO15178 435 aa13.12□□□□□ -0.31
BRCA1-218ENST00000489037 ITM2AO43736 263 aa13.12□□□□□ -0.31
BRCA1-218ENST00000489037 ZG16O60844 167 aa13.12□□□□□ -0.31
BRCA1-218ENST00000489037 ABCB7O75027 752 aa13.12□□□□□ -0.31
BRCA1-218ENST00000489037 ABCB1P08183 1280 aaPredicted RBP13.12□□□□□ -0.31
BRCA1-218ENST00000489037 IL12BP29460 328 aa13.12□□□□□ -0.31
BRCA1-218ENST00000489037 ARRB2P32121 409 aa13.12□□□□□ -0.31
BRCA1-218ENST00000489037 MC3RP41968 323 aa13.12□□□□□ -0.31
BRCA1-218ENST00000489037 MAGEA5P43359 124 aa13.12□□□□□ -0.31
BRCA1-218ENST00000489037 MAGOHP61326 146 aaKnown RBP13.12□□□□□ -0.31
BRCA1-218ENST00000489037 FOXO1Q12778 655 aa13.12□□□□□ -0.31
BRCA1-218ENST00000489037 HSPB3Q12988 150 aa13.12□□□□□ -0.31
BRCA1-218ENST00000489037 DUSP8Q13202 625 aa13.12□□□□□ -0.31
BRCA1-218ENST00000489037 CASP8Q14790 479 aa13.12□□□□□ -0.31
BRCA1-218ENST00000489037 PDCD2Q16342 344 aaPredicted RBP13.12□□□□□ -0.31
BRCA1-218ENST00000489037 C6orf136Q5SQH8 315 aa13.12□□□□□ -0.31
BRCA1-218ENST00000489037 RPTNQ6XPR3 784 aa13.12□□□□□ -0.31
BRCA1-218ENST00000489037 TRIM42Q8IWZ5 723 aa13.12□□□□□ -0.31
BRCA1-218ENST00000489037 LIX1Q8N485 282 aa13.12□□□□□ -0.31
BRCA1-218ENST00000489037 ZNF781Q8N8C0 355 aa13.12□□□□□ -0.31
BRCA1-218ENST00000489037 SIMC1Q8NDZ2 872 aa13.12□□□□□ -0.31
BRCA1-218ENST00000489037 OR7G2Q8NG99 324 aa13.12□□□□□ -0.31
BRCA1-218ENST00000489037 MGARPQ8TDB4 240 aa13.12□□□□□ -0.31
BRCA1-218ENST00000489037 TMCO6Q96DC7 493 aa13.12□□□□□ -0.31
BRCA1-218ENST00000489037 ELP4Q96EB1 424 aa13.12□□□□□ -0.31
BRCA1-218ENST00000489037 BTBD9Q96Q07 612 aa13.12□□□□□ -0.31
BRCA1-218ENST00000489037 ZDHHC11Q9H8X9 412 aa13.12□□□□□ -0.31
BRCA1-218ENST00000489037 ANKRA2Q9H9E1 313 aa13.12□□□□□ -0.31
BRCA1-218ENST00000489037 FOLH1BQ9HBA9 442 aa13.12□□□□□ -0.31
BRCA1-218ENST00000489037 ATAD3AQ9NVI7 634 aa13.12□□□□□ -0.31
BRCA1-218ENST00000489037 QPCTLQ9NXS2 382 aa13.12□□□□□ -0.31
BRCA1-218ENST00000489037 PLEKHB1Q9UF11 243 aaPredicted RBP13.12□□□□□ -0.31
BRCA1-218ENST00000489037 TINAGQ9UJW2 476 aa13.12□□□□□ -0.31
BRCA1-218ENST00000489037 MRTO4Q9UKD2 239 aaKnown RBP13.12□□□□□ -0.31
BRCA1-218ENST00000489037 C19orf53Q9UNZ5 99 aaPredicted RBP13.12□□□□□ -0.31
BRCA1-218ENST00000489037 EXO1Q9UQ84 846 aaKnown RBP13.12□□□□□ -0.31
BRCA1-218ENST00000489037 ASH1LQ9NR48 2969 aaKnown RBP13.12□□□□□ -0.31
BRCA1-218ENST00000489037 DOPEY1Q5JWR5 2465 aa13.12□□□□□ -0.31
BRCA1-218ENST00000489037 TTC36A6NLP5 189 aa13.11□□□□□ -0.31
BRCA1-218ENST00000489037 IFI6P09912 130 aa13.11□□□□□ -0.31
BRCA1-218ENST00000489037 GDF1P27539 372 aa13.11□□□□□ -0.31
BRCA1-218ENST00000489037 SOX18P35713 384 aa13.11□□□□□ -0.31
BRCA1-218ENST00000489037 CASP3P42574 277 aa13.11□□□□□ -0.31
BRCA1-218ENST00000489037 MAN2A2P49641 1150 aa13.11□□□□□ -0.31
BRCA1-218ENST00000489037 SMSP52788 366 aa13.11□□□□□ -0.31
BRCA1-218ENST00000489037 SLC18A1P54219 525 aa13.11□□□□□ -0.31
BRCA1-218ENST00000489037 EFR3AQ14156 821 aa13.11□□□□□ -0.31
BRCA1-218ENST00000489037 MPP2Q14168 576 aa13.11□□□□□ -0.31
BRCA1-218ENST00000489037 PRSS53Q2L4Q9 553 aa13.11□□□□□ -0.31
BRCA1-218ENST00000489037 IL23RQ5VWK5 629 aa13.11□□□□□ -0.31
BRCA1-218ENST00000489037 ATG16L1Q676U5 607 aa13.11□□□□□ -0.31
BRCA1-218ENST00000489037 ANKRD26P1Q6NSI1 321 aa13.11□□□□□ -0.31
BRCA1-218ENST00000489037 SLC30A6Q6NXT4 461 aa13.11□□□□□ -0.31
BRCA1-218ENST00000489037 MAMDC2Q7Z304 686 aaPredicted RBP13.11□□□□□ -0.31
BRCA1-218ENST00000489037 SLC44A2Q8IWA5 706 aaPredicted RBP13.11□□□□□ -0.31
BRCA1-218ENST00000489037 NATD1Q8N6N6 113 aa13.11□□□□□ -0.31
BRCA1-218ENST00000489037 GOLGA6L1Q8N7Z2 621 aa13.11□□□□□ -0.31
BRCA1-218ENST00000489037 CEP70Q8NHQ1 597 aa13.11□□□□□ -0.31
BRCA1-218ENST00000489037 FAM57AQ8TBR7 257 aa13.11□□□□□ -0.31
BRCA1-218ENST00000489037 TMBIM1Q969X1 311 aa13.11□□□□□ -0.31
BRCA1-218ENST00000489037 DTNBP1Q96EV8 351 aa13.11□□□□□ -0.31
BRCA1-218ENST00000489037 C3orf30Q96M34 536 aa13.11□□□□□ -0.31
BRCA1-218ENST00000489037 VSTM2LQ96N03 204 aa13.11□□□□□ -0.31
BRCA1-218ENST00000489037 RILPQ96NA2 401 aa13.11□□□□□ -0.31
BRCA1-218ENST00000489037 COL21A1Q96P44 957 aa13.11□□□□□ -0.31
BRCA1-218ENST00000489037 C1orf50Q9BV19 199 aa13.11□□□□□ -0.31
BRCA1-218ENST00000489037 ANGPTL4Q9BY76 406 aa13.11□□□□□ -0.31
BRCA1-218ENST00000489037 C3orf14Q9HBI5 128 aa13.11□□□□□ -0.31
BRCA1-218ENST00000489037 PLSCR2Q9NRY7 297 aa13.11□□□□□ -0.31
BRCA1-218ENST00000489037 ACSS1Q9NUB1 689 aaPredicted RBP13.11□□□□□ -0.31
BRCA1-218ENST00000489037 KLRF1Q9NZS2 232 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms