RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 MLXQ9UH92 298 aa2.97□□□□□ -1.93
SSR1-209ENST00000488834 LAMP5Q9UJQ1 280 aa2.97□□□□□ -1.93
SSR1-209ENST00000488834 ATG4BQ9Y4P1 393 aa2.97□□□□□ -1.93
SSR1-209ENST00000488834 FGD5Q6ZNL6 1462 aa2.96□□□□□ -1.93
SSR1-209ENST00000488834 IGHV3OR16-12A0A075B7B8 117 aa2.96□□□□□ -1.94
SSR1-209ENST00000488834 ERICH4A6NGS2 130 aa2.96□□□□□ -1.94
SSR1-209ENST00000488834 CCT8L1PA6NM43 557 aa2.96□□□□□ -1.94
SSR1-209ENST00000488834 TMEM110-MUSTN1A8MSY1 372 aa2.96□□□□□ -1.94
SSR1-209ENST00000488834 K7EPI3 171 aa2.96□□□□□ -1.94
SSR1-209ENST00000488834 SAP18O00422 153 aaKnown RBP2.96□□□□□ -1.94
SSR1-209ENST00000488834 SH2D1BO14796 132 aa2.96□□□□□ -1.94
SSR1-209ENST00000488834 BCAS2O75934 225 aaPredicted RBP2.96□□□□□ -1.94
SSR1-209ENST00000488834 REC8O95072 547 aa2.96□□□□□ -1.94
SSR1-209ENST00000488834 SNX4O95219 450 aa2.96□□□□□ -1.94
SSR1-209ENST00000488834 IGHG3P01860 377 aa2.96□□□□□ -1.94
SSR1-209ENST00000488834 GSTA1P08263 222 aa2.96□□□□□ -1.94
SSR1-209ENST00000488834 SERPINF2P08697 491 aa2.96□□□□□ -1.94
SSR1-209ENST00000488834 KRTAP1-4P0C5Y4 121 aa2.96□□□□□ -1.94
SSR1-209ENST00000488834 GDF1P27539 372 aa2.96□□□□□ -1.94
SSR1-209ENST00000488834 CASQ1P31415 396 aa2.96□□□□□ -1.94
SSR1-209ENST00000488834 NDST1P52848 882 aa2.96□□□□□ -1.94
SSR1-209ENST00000488834 SLC25A1P53007 311 aa2.96□□□□□ -1.94
SSR1-209ENST00000488834 RPS4XP62701 263 aaKnown RBP2.96□□□□□ -1.94
SSR1-209ENST00000488834 HTD2P86397 168 aa2.96□□□□□ -1.94
SSR1-209ENST00000488834 CCZ1BP86790 482 aa2.96□□□□□ -1.94
SSR1-209ENST00000488834 CCZ1P86791 482 aaPredicted RBP2.96□□□□□ -1.94
SSR1-209ENST00000488834 PRKCEQ02156 737 aa2.96□□□□□ -1.94
SSR1-209ENST00000488834 GABPB1Q06547 395 aaPredicted RBP2.96□□□□□ -1.94
SSR1-209ENST00000488834 EXOSC7Q15024 291 aaKnown RBP2.96□□□□□ -1.94
SSR1-209ENST00000488834 HAGHQ16775 308 aa2.96□□□□□ -1.94
SSR1-209ENST00000488834 SHROOM1Q2M3G4 852 aaPredicted RBP2.96□□□□□ -1.94
SSR1-209ENST00000488834 PRR30Q53SZ7 412 aaPredicted RBP2.96□□□□□ -1.94
SSR1-209ENST00000488834 TOR1AIP1Q5JTV8 583 aa2.96□□□□□ -1.94
SSR1-209ENST00000488834 UTF1Q5T230 341 aa2.96□□□□□ -1.94
SSR1-209ENST00000488834 HIST2H2AA3Q6FI13 130 aa2.96□□□□□ -1.94
SSR1-209ENST00000488834 RHBDD2Q6NTF9 364 aa2.96□□□□□ -1.94
SSR1-209ENST00000488834 GPR142Q7Z601 462 aa2.96□□□□□ -1.94
SSR1-209ENST00000488834 CNTN4Q8IWV2 1026 aa2.96□□□□□ -1.94
SSR1-209ENST00000488834 GTSF1Q8WW33 167 aa2.96□□□□□ -1.94
SSR1-209ENST00000488834 CRYGNQ8WXF5 182 aa2.96□□□□□ -1.94
SSR1-209ENST00000488834 BADQ92934 168 aa2.96□□□□□ -1.94
SSR1-209ENST00000488834 MAPKAP1Q9BPZ7 522 aa2.96□□□□□ -1.94
SSR1-209ENST00000488834 ST6GALNAC5Q9BVH7 336 aa2.96□□□□□ -1.94
SSR1-209ENST00000488834 ABCG8Q9H221 673 aa2.96□□□□□ -1.94
SSR1-209ENST00000488834 TMEM245Q9H330 911 aa2.96□□□□□ -1.94
SSR1-209ENST00000488834 ANO10Q9NW15 660 aa2.96□□□□□ -1.94
SSR1-209ENST00000488834 ZNF446Q9NWS9 450 aa2.96□□□□□ -1.94
SSR1-209ENST00000488834 IMPAD1Q9NX62 359 aa2.96□□□□□ -1.94
SSR1-209ENST00000488834 TAS2R3Q9NYW6 316 aa2.96□□□□□ -1.94
SSR1-209ENST00000488834 COPS7AQ9UBW8 275 aa2.96□□□□□ -1.94
SSR1-209ENST00000488834 PRODH2Q9UF12 536 aa2.96□□□□□ -1.94
SSR1-209ENST00000488834 NARFQ9UHQ1 456 aa2.96□□□□□ -1.94
SSR1-209ENST00000488834 CTNNA3Q9UI47 895 aa2.96□□□□□ -1.94
SSR1-209ENST00000488834 MRPS2Q9Y399 296 aaKnown RBP2.96□□□□□ -1.94
SSR1-209ENST00000488834 NINLQ9Y2I6 1382 aa2.96□□□□□ -1.94
SSR1-209ENST00000488834 SPAG9O60271 1321 aaKnown RBP2.95□□□□□ -1.94
SSR1-209ENST00000488834 TRBV2A0A0J9YWF9 115 aa2.95□□□□□ -1.94
SSR1-209ENST00000488834 RNF103-CHMP3A0A140T963 221 aa2.95□□□□□ -1.94
SSR1-209ENST00000488834 TLR4O00206 839 aa2.95□□□□□ -1.94
SSR1-209ENST00000488834 CYB561D2O14569 222 aa2.95□□□□□ -1.94
SSR1-209ENST00000488834 EI24O14681 340 aa2.95□□□□□ -1.94
SSR1-209ENST00000488834 TNFSF11O14788 317 aa2.95□□□□□ -1.94
SSR1-209ENST00000488834 CTAGE5O15320 804 aa2.95□□□□□ -1.94
SSR1-209ENST00000488834 GPAA1O43292 621 aa2.95□□□□□ -1.94
SSR1-209ENST00000488834 NOL3O60936 208 aaKnown RBP2.95□□□□□ -1.94
SSR1-209ENST00000488834 IFNB1P01574 187 aa2.95□□□□□ -1.94
SSR1-209ENST00000488834 ABHD2P08910 425 aa2.95□□□□□ -1.94
SSR1-209ENST00000488834 HIST1H2AGP0C0S8 130 aaPredicted RBP2.95□□□□□ -1.94
SSR1-209ENST00000488834 IL10P22301 178 aa2.95□□□□□ -1.94
SSR1-209ENST00000488834 PBLDP30039 288 aaPredicted RBP2.95□□□□□ -1.94
SSR1-209ENST00000488834 PRKAR2BP31323 418 aa2.95□□□□□ -1.94
SSR1-209ENST00000488834 CD151P48509 253 aa2.95□□□□□ -1.94
SSR1-209ENST00000488834 HNRNPFP52597 415 aaKnown RBP2.95□□□□□ -1.94
SSR1-209ENST00000488834 GTF2A1P52655 376 aaPredicted RBP2.95□□□□□ -1.94
SSR1-209ENST00000488834 ARFIP1P53367 373 aa2.95□□□□□ -1.94
SSR1-209ENST00000488834 MAJINQ3KP22 176 aa2.95□□□□□ -1.94
SSR1-209ENST00000488834 NKAIN2Q5VXU1 208 aa2.95□□□□□ -1.94
SSR1-209ENST00000488834 CWC27Q6UX04 472 aaKnown RBP2.95□□□□□ -1.94
SSR1-209ENST00000488834 MFSD7Q6UXD7 560 aa2.95□□□□□ -1.94
SSR1-209ENST00000488834 PAMR1Q6UXH9 720 aa2.95□□□□□ -1.94
SSR1-209ENST00000488834 RABEPKQ7Z6M1 372 aa2.95□□□□□ -1.94
SSR1-209ENST00000488834 ERICH1Q86X53 443 aa2.95□□□□□ -1.94
SSR1-209ENST00000488834 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.95□□□□□ -1.94
SSR1-209ENST00000488834 BATF2Q8N1L9 274 aa2.95□□□□□ -1.94
SSR1-209ENST00000488834 HDDC3Q8N4P3 179 aa2.95□□□□□ -1.94
SSR1-209ENST00000488834 C11orf42Q8N5U0 333 aa2.95□□□□□ -1.94
SSR1-209ENST00000488834 ZNF525Q8N782 197 aa2.95□□□□□ -1.94
SSR1-209ENST00000488834 SHC3Q92529 594 aa2.95□□□□□ -1.94
SSR1-209ENST00000488834 HIST1H2ACQ93077 130 aa2.95□□□□□ -1.94
SSR1-209ENST00000488834 RAB39BQ96DA2 213 aa2.95□□□□□ -1.94
SSR1-209ENST00000488834 CAPNS2Q96L46 248 aa2.95□□□□□ -1.94
SSR1-209ENST00000488834 B3GALT6Q96L58 329 aa2.95□□□□□ -1.94
SSR1-209ENST00000488834 OR5M11Q96RB7 305 aa2.95□□□□□ -1.94
SSR1-209ENST00000488834 YTHDF1Q9BYJ9 559 aaKnown RBP2.95□□□□□ -1.94
SSR1-209ENST00000488834 DEFB126Q9BYW3 111 aa2.95□□□□□ -1.94
SSR1-209ENST00000488834 NACA2Q9H009 215 aa2.95□□□□□ -1.94
SSR1-209ENST00000488834 PRMT8Q9NR22 394 aaPredicted RBP2.95□□□□□ -1.94
SSR1-209ENST00000488834 PIGVQ9NUD9 493 aa2.95□□□□□ -1.94
SSR1-209ENST00000488834 CYP39A1Q9NYL5 469 aa2.95□□□□□ -1.94
SSR1-209ENST00000488834 NINJ2Q9NZG7 142 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms