RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 NR5A2O00482 541 aa14.54□□□□□ -0.08
C9orf3-219ENST00000488186 RFXANKO14593 260 aa14.54□□□□□ -0.08
C9orf3-219ENST00000488186 ACOX3O15254 700 aa14.54□□□□□ -0.08
C9orf3-219ENST00000488186 OR6B1O95007 311 aa14.54□□□□□ -0.08
C9orf3-219ENST00000488186 SOX18P35713 384 aa14.54□□□□□ -0.08
C9orf3-219ENST00000488186 CHI3L1P36222 383 aaPredicted RBP14.54□□□□□ -0.08
C9orf3-219ENST00000488186 CD97P48960 835 aa14.54□□□□□ -0.08
C9orf3-219ENST00000488186 MRPL19P49406 292 aaKnown RBP14.54□□□□□ -0.08
C9orf3-219ENST00000488186 PRIM2P49643 509 aa14.54□□□□□ -0.08
C9orf3-219ENST00000488186 WNT3P56703 355 aa14.54□□□□□ -0.08
C9orf3-219ENST00000488186 PSPHP78330 225 aa14.54□□□□□ -0.08
C9orf3-219ENST00000488186 PLEKHN1Q494U1 663 aaPredicted RBP14.54□□□□□ -0.08
C9orf3-219ENST00000488186 TIGD2Q4W5G0 525 aa14.54□□□□□ -0.08
C9orf3-219ENST00000488186 ZNF468Q5VIY5 522 aaPredicted RBP14.54□□□□□ -0.08
C9orf3-219ENST00000488186 SPINK14Q6IE38 97 aa14.54□□□□□ -0.08
C9orf3-219ENST00000488186 TMEM64Q6YI46 380 aa14.54□□□□□ -0.08
C9orf3-219ENST00000488186 Q6ZS92 163 aa14.54□□□□□ -0.08
C9orf3-219ENST00000488186 ZNF621Q6ZSS3 439 aa14.54□□□□□ -0.08
C9orf3-219ENST00000488186 DND1Q8IYX4 353 aaKnown RBP14.54□□□□□ -0.08
C9orf3-219ENST00000488186 CDRT4Q8N9R6 151 aa14.54□□□□□ -0.08
C9orf3-219ENST00000488186 SFXN5Q8TD22 340 aa14.54□□□□□ -0.08
C9orf3-219ENST00000488186 SLC9A6Q92581 669 aa14.54□□□□□ -0.08
C9orf3-219ENST00000488186 JADE3Q92613 823 aa14.54□□□□□ -0.08
C9orf3-219ENST00000488186 FAM120BQ96EK7 910 aaKnown RBP14.54□□□□□ -0.08
C9orf3-219ENST00000488186 ITCHQ96J02 903 aa14.54□□□□□ -0.08
C9orf3-219ENST00000488186 CCDC115Q96NT0 180 aa14.54□□□□□ -0.08
C9orf3-219ENST00000488186 MS4A4EQ96PG1 132 aa14.54□□□□□ -0.08
C9orf3-219ENST00000488186 NXF5Q9H1B4 397 aaKnown RBP14.54□□□□□ -0.08
C9orf3-219ENST00000488186 Q9N2J8 555 aa14.54□□□□□ -0.08
C9orf3-219ENST00000488186 TIMMDC1Q9NPL8 285 aa14.54□□□□□ -0.08
C9orf3-219ENST00000488186 KLHL1Q9NR64 748 aa14.54□□□□□ -0.08
C9orf3-219ENST00000488186 TMEM45AQ9NWC5 275 aa14.54□□□□□ -0.08
C9orf3-219ENST00000488186 VPS4AQ9UN37 437 aa14.54□□□□□ -0.08
C9orf3-219ENST00000488186 GPR55Q9Y2T6 319 aaPredicted RBP14.54□□□□□ -0.08
C9orf3-219ENST00000488186 NPFFR2Q9Y5X5 522 aa14.54□□□□□ -0.08
C9orf3-219ENST00000488186 FASNP49327 2511 aaKnown RBP14.53□□□□□ -0.08
C9orf3-219ENST00000488186 CPAMD8Q8IZJ3 1885 aa14.53□□□□□ -0.08
C9orf3-219ENST00000488186 TP53I11O14683 189 aa14.53□□□□□ -0.08
C9orf3-219ENST00000488186 SUV39H1O43463 412 aa14.53□□□□□ -0.08
C9orf3-219ENST00000488186 NME6O75414 186 aaPredicted RBP14.53□□□□□ -0.08
C9orf3-219ENST00000488186 REM1O75628 298 aa14.53□□□□□ -0.08
C9orf3-219ENST00000488186 SLC25A12O75746 678 aa14.53□□□□□ -0.08
C9orf3-219ENST00000488186 KRT16P08779 473 aa14.53□□□□□ -0.08
C9orf3-219ENST00000488186 ALOX5P09917 674 aa14.53□□□□□ -0.08
C9orf3-219ENST00000488186 UQCRC2P22695 453 aa14.53□□□□□ -0.08
C9orf3-219ENST00000488186 RPP38P78345 283 aaKnown RBP14.53□□□□□ -0.08
C9orf3-219ENST00000488186 PHC1P78364 1004 aa14.53□□□□□ -0.08
C9orf3-219ENST00000488186 PLCXD2Q0VAA5 305 aa14.53□□□□□ -0.08
C9orf3-219ENST00000488186 ZNF766Q5HY98 468 aa14.53□□□□□ -0.08
C9orf3-219ENST00000488186 C6orf10Q5SRN2 563 aa14.53□□□□□ -0.08
C9orf3-219ENST00000488186 SLC6A19Q695T7 634 aa14.53□□□□□ -0.08
C9orf3-219ENST00000488186 SLC25A25Q6KCM7 469 aa14.53□□□□□ -0.08
C9orf3-219ENST00000488186 ZCCHC12Q6PEW1 402 aa14.53□□□□□ -0.08
C9orf3-219ENST00000488186 ANGPTL8Q6UXH0 198 aa14.53□□□□□ -0.08
C9orf3-219ENST00000488186 RTL4Q6ZR62 310 aa14.53□□□□□ -0.08
C9orf3-219ENST00000488186 MSANTD1Q6ZTZ1 278 aa14.53□□□□□ -0.08
C9orf3-219ENST00000488186 PRR22Q8IZ63 422 aa14.53□□□□□ -0.08
C9orf3-219ENST00000488186 ZNF441Q8N8Z8 693 aa14.53□□□□□ -0.08
C9orf3-219ENST00000488186 TMEM178AQ8NBL3 297 aa14.53□□□□□ -0.08
C9orf3-219ENST00000488186 FAM13CQ8NE31 585 aa14.53□□□□□ -0.08
C9orf3-219ENST00000488186 OR5M3Q8NGP4 307 aa14.53□□□□□ -0.08
C9orf3-219ENST00000488186 OR5AK3PQ8NH89 298 aa14.53□□□□□ -0.08
C9orf3-219ENST00000488186 PSMA8Q8TAA3 256 aa14.53□□□□□ -0.08
C9orf3-219ENST00000488186 GPR151Q8TDV0 419 aa14.53□□□□□ -0.08
C9orf3-219ENST00000488186 VPS33AQ96AX1 596 aa14.53□□□□□ -0.08
C9orf3-219ENST00000488186 SPDL1Q96EA4 605 aa14.53□□□□□ -0.08
C9orf3-219ENST00000488186 SGCZQ96LD1 299 aa14.53□□□□□ -0.08
C9orf3-219ENST00000488186 VSTM2LQ96N03 204 aa14.53□□□□□ -0.08
C9orf3-219ENST00000488186 SIGLEC12Q96PQ1 595 aa14.53□□□□□ -0.08
C9orf3-219ENST00000488186 YIPF4Q9BSR8 244 aa14.53□□□□□ -0.08
C9orf3-219ENST00000488186 SIRT3Q9NTG7 399 aaPredicted RBP14.53□□□□□ -0.08
C9orf3-219ENST00000488186 FAM53CQ9NYF3 392 aa14.53□□□□□ -0.08
C9orf3-219ENST00000488186 NTMQ9P121 344 aa14.53□□□□□ -0.08
C9orf3-219ENST00000488186 LUZP4Q9P127 313 aa14.53□□□□□ -0.08
C9orf3-219ENST00000488186 MAP10Q9P2G4 905 aa14.53□□□□□ -0.08
C9orf3-219ENST00000488186 MRTO4Q9UKD2 239 aaKnown RBP14.53□□□□□ -0.08
C9orf3-219ENST00000488186 CSAG2Q9Y5P2 127 aa14.53□□□□□ -0.08
C9orf3-219ENST00000488186 RNF103-CHMP3A0A140T963 221 aa14.52□□□□□ -0.09
C9orf3-219ENST00000488186 TTLL8A6PVC2 850 aa14.52□□□□□ -0.09
C9orf3-219ENST00000488186 CCDC22O60826 627 aa14.52□□□□□ -0.09
C9orf3-219ENST00000488186 P04436 131 aa14.52□□□□□ -0.09
C9orf3-219ENST00000488186 HMGN2P05204 90 aaKnown RBP14.52□□□□□ -0.09
C9orf3-219ENST00000488186 SP1P08047 785 aa14.52□□□□□ -0.09
C9orf3-219ENST00000488186 FBXO45P0C2W1 286 aa14.52□□□□□ -0.09
C9orf3-219ENST00000488186 DRD4P21917 467 aa14.52□□□□□ -0.09
C9orf3-219ENST00000488186 ABCD3P28288 659 aa14.52□□□□□ -0.09
C9orf3-219ENST00000488186 IL12BP29460 328 aa14.52□□□□□ -0.09
C9orf3-219ENST00000488186 GABRA3P34903 492 aa14.52□□□□□ -0.09
C9orf3-219ENST00000488186 CORO7P57737 925 aa14.52□□□□□ -0.09
C9orf3-219ENST00000488186 LASP1Q14847 261 aaKnown RBP14.52□□□□□ -0.09
C9orf3-219ENST00000488186 COLEC12Q5KU26 742 aa14.52□□□□□ -0.09
C9orf3-219ENST00000488186 BLOC1S3Q6QNY0 202 aa14.52□□□□□ -0.09
C9orf3-219ENST00000488186 C6orf120Q7Z4R8 191 aa14.52□□□□□ -0.09
C9orf3-219ENST00000488186 SLC34A3Q8N130 599 aa14.52□□□□□ -0.09
C9orf3-219ENST00000488186 FAM98AQ8NCA5 519 aaKnown RBP14.52□□□□□ -0.09
C9orf3-219ENST00000488186 ADAMTS15Q8TE58 950 aa14.52□□□□□ -0.09
C9orf3-219ENST00000488186 C10orf82Q8WW14 230 aa14.52□□□□□ -0.09
C9orf3-219ENST00000488186 SPACA9Q96E40 222 aaPredicted RBP14.52□□□□□ -0.09
C9orf3-219ENST00000488186 C16orf58Q96GQ5 468 aa14.52□□□□□ -0.09
C9orf3-219ENST00000488186 BTBD9Q96Q07 612 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms