RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 CCDC181Q5TID7 509 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 C8orf82Q6P1X6 216 aaPredicted RBP3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 PRMT9Q6P2P2 845 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 MTFR2Q6P444 385 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 AAGABQ6PD74 315 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 FIGLAQ6QHK4 219 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 UNC5DQ6UXZ4 953 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 LINC00696Q6ZRV3 163 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 COX15Q7KZN9 410 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 NDUFAF7Q7L592 441 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 LINC00523Q86TU6 105 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 TRABD2AQ86V40 505 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 FJX1Q86VR8 437 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 CCDC25Q86WR0 208 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 VSTM4Q8IW00 320 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 MCEMP1Q8IX19 187 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 SLC22A15Q8IZD6 547 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 LRRC57Q8N9N7 239 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 LMNTD1Q8N9Z9 388 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 TTC29Q8NA56 475 aaPredicted RBP3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 LINC01555Q8NAE3 123 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 CATSPER1Q8NEC5 780 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 OR1N1Q8NGS0 311 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 OR2L8Q8NGY9 312 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 CCDC110Q8TBZ0 833 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 STT3BQ8TCJ2 826 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 ASZ1Q8WWH4 475 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 PSMF1Q92530 271 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 KRT35Q92764 455 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 CNDP1Q96KN2 507 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 SELENOSQ9BQE4 189 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 CARD6Q9BX69 1037 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 OSBPL8Q9BZF1 889 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 GOLPH3Q9H4A6 298 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 LRRC40Q9H9A6 602 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 CHST11Q9NPF2 352 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 ZNF282Q9UDV7 671 aaPredicted RBP3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 PLAGL1Q9UM63 463 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 KLHL20Q9Y2M5 609 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 KLK4Q9Y5K2 254 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 DNAJC13O75165 2243 aa3.72□□□□□ -1.81
SNRNP40-205ENST00000486941 NSG1A0A0A6YYJ2 146 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 CCDC162PA2VCL2 907 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 OR51F1A6NGY5 319 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 ERI2A8K979 691 aaKnown RBP3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 AKR1B15C9JRZ8 316 aaPredicted RBP3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 MAP2K7O14733 419 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 RASGRF2O14827 1237 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 OR1I1O60431 355 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 CTSVO60911 334 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 SLCO2B1O94956 709 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 BMP10O95393 424 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 METTL18O95568 372 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 ALDOAP04075 364 aaKnown RBP3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 SERPINA7P05543 415 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 APOA4P06727 396 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 PRSS2P07478 247 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 COX6A1P12074 109 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 ICAM2P13598 275 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 AGAP20933 346 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 CXCR2P25025 360 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 MCM3P25205 808 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 HTR1EP28566 365 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 CCR7P32248 378 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 TNFSF10P50591 281 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 EMP2P54851 167 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 RWDD2BP57060 319 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 KCNK10P57789 538 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 VSX2P58304 361 aaPredicted RBP3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 AP2B1P63010 937 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 ARG2P78540 354 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 KLC1Q07866 573 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 HSPA14Q0VDF9 509 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 CDH17Q12864 832 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 TBX2Q13207 712 aaPredicted RBP3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 POU6F1Q14863 301 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 NAA25Q14CX7 972 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 ZNF630Q2M218 657 aaPredicted RBP3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 ZNF672Q499Z4 452 aaPredicted RBP3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 FAM209BQ5JX69 171 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 TTC23LQ6PF05 361 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 XKRXQ6PP77 449 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 TMEM207Q6UWW9 146 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 GFRALQ6UXV0 394 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 SHISA6Q6ZSJ9 500 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 NLRP9Q7RTR0 991 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 DCUN1D3Q8IWE4 304 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 CCDC170Q8IYT3 715 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 C2orf73Q8N5S3 287 aaPredicted RBP3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 ADPRHL1Q8NDY3 354 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 OR13J1Q8NGT2 312 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 OR4L1Q8NH43 312 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 CFAP61Q8NHU2 1237 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 HMGCLL1Q8TB92 370 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 ITLN2Q8WWU7 325 aaPredicted RBP3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 PEX13Q92968 403 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 RAD51AP1Q96B01 352 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 LURAP1Q96LR2 239 aa3.71□□□□□ -1.82
SNRNP40-205ENST00000486941 TAAR6Q96RI8 345 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms