RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 XKR8Q9H6D3 395 aa11.68□□□□□ -0.54
HSPG2-211ENST00000486901 LOC105371267A0A1B0GV96 52 aa11.67□□□□□ -0.54
HSPG2-211ENST00000486901 GABRPO00591 440 aa11.67□□□□□ -0.54
HSPG2-211ENST00000486901 PLPP1O14494 284 aa11.67□□□□□ -0.54
HSPG2-211ENST00000486901 PIP5K1CO60331 668 aa11.67□□□□□ -0.54
HSPG2-211ENST00000486901 GREM1O60565 184 aa11.67□□□□□ -0.54
HSPG2-211ENST00000486901 ATG13O75143 517 aa11.67□□□□□ -0.54
HSPG2-211ENST00000486901 SOCS5O75159 536 aa11.67□□□□□ -0.54
HSPG2-211ENST00000486901 ALPPP05187 535 aa11.67□□□□□ -0.54
HSPG2-211ENST00000486901 NAT1P18440 290 aa11.67□□□□□ -0.54
HSPG2-211ENST00000486901 MLLT3P42568 568 aaPredicted RBP11.67□□□□□ -0.54
HSPG2-211ENST00000486901 TAP2Q03519 686 aa11.67□□□□□ -0.54
HSPG2-211ENST00000486901 MAB21L1Q13394 359 aa11.67□□□□□ -0.54
HSPG2-211ENST00000486901 GPR176Q14439 515 aa11.67□□□□□ -0.54
HSPG2-211ENST00000486901 HIST2H2AA3Q6FI13 130 aa11.67□□□□□ -0.54
HSPG2-211ENST00000486901 FAM71E1Q6IPT2 247 aa11.67□□□□□ -0.54
HSPG2-211ENST00000486901 CDH24Q86UP0 819 aa11.67□□□□□ -0.54
HSPG2-211ENST00000486901 CCDC116Q8IYX3 515 aa11.67□□□□□ -0.54
HSPG2-211ENST00000486901 ANKK1Q8NFD2 765 aa11.67□□□□□ -0.54
HSPG2-211ENST00000486901 RELTQ969Z4 430 aa11.67□□□□□ -0.54
HSPG2-211ENST00000486901 DDX31Q9H8H2 851 aaKnown RBP11.67□□□□□ -0.54
HSPG2-211ENST00000486901 PPIEQ9UNP9 301 aaKnown RBP11.67□□□□□ -0.54
HSPG2-211ENST00000486901 NPC1O15118 1278 aa11.67□□□□□ -0.54
HSPG2-211ENST00000486901 GATBO75879 557 aaKnown RBP11.67□□□□□ -0.54
HSPG2-211ENST00000486901 GYPBP06028 91 aa11.67□□□□□ -0.54
HSPG2-211ENST00000486901 ELFN1P0C7U0 828 aa11.67□□□□□ -0.54
HSPG2-211ENST00000486901 C1GALT1C1LP0DN25 315 aa11.67□□□□□ -0.54
HSPG2-211ENST00000486901 RAET1GQ6H3X3 334 aa11.67□□□□□ -0.54
HSPG2-211ENST00000486901 SOCS4Q8WXH5 440 aa11.67□□□□□ -0.54
HSPG2-211ENST00000486901 ECHDC3Q96DC8 303 aa11.67□□□□□ -0.54
HSPG2-211ENST00000486901 ORAI3Q9BRQ5 295 aa11.67□□□□□ -0.54
HSPG2-211ENST00000486901 ENAMQ9NRM1 1142 aa11.67□□□□□ -0.54
HSPG2-211ENST00000486901 HCFC2Q9Y5Z7 792 aa11.67□□□□□ -0.54
HSPG2-211ENST00000486901 TRPM7Q96QT4 1865 aa11.67□□□□□ -0.54
HSPG2-211ENST00000486901 FAM170BA6NMN3 283 aa11.67□□□□□ -0.54
HSPG2-211ENST00000486901 AGAP14A8MT82 685 aa11.67□□□□□ -0.54
HSPG2-211ENST00000486901 SIGLEC5O15389 551 aa11.67□□□□□ -0.54
HSPG2-211ENST00000486901 C1orf105O95561 183 aa11.67□□□□□ -0.54
HSPG2-211ENST00000486901 IL1AP01583 271 aa11.67□□□□□ -0.54
HSPG2-211ENST00000486901 TP53P04637 393 aaPredicted RBP11.67□□□□□ -0.54
HSPG2-211ENST00000486901 RB1P06400 928 aa11.67□□□□□ -0.54
HSPG2-211ENST00000486901 HOXB6P17509 224 aaKnown RBP11.67□□□□□ -0.54
HSPG2-211ENST00000486901 POLR2EP19388 210 aaKnown RBP11.67□□□□□ -0.54
HSPG2-211ENST00000486901 VIPR1P32241 457 aa11.67□□□□□ -0.54
HSPG2-211ENST00000486901 TAS2R41P59536 307 aa11.67□□□□□ -0.54
HSPG2-211ENST00000486901 SIGLEC14Q08ET2 396 aa11.67□□□□□ -0.54
HSPG2-211ENST00000486901 VRK2Q86Y07 508 aa11.67□□□□□ -0.54
HSPG2-211ENST00000486901 CBARPQ8N350 705 aaPredicted RBP11.67□□□□□ -0.54
HSPG2-211ENST00000486901 OR2A12Q8NGT7 310 aa11.67□□□□□ -0.54
HSPG2-211ENST00000486901 BTN2A2Q8WVV5 523 aa11.67□□□□□ -0.54
HSPG2-211ENST00000486901 ATF6BQ99941 703 aa11.67□□□□□ -0.54
HSPG2-211ENST00000486901 OR51V1Q9H2C8 321 aa11.67□□□□□ -0.54
HSPG2-211ENST00000486901 A4GNTQ9UNA3 340 aa11.67□□□□□ -0.54
HSPG2-211ENST00000486901 SIRT4Q9Y6E7 314 aaPredicted RBP11.67□□□□□ -0.54
HSPG2-211ENST00000486901 PDPK1O15530 556 aa11.66□□□□□ -0.54
HSPG2-211ENST00000486901 ORC5O43913 435 aa11.66□□□□□ -0.54
HSPG2-211ENST00000486901 PROS1P07225 676 aa11.66□□□□□ -0.54
HSPG2-211ENST00000486901 MPC1LP0DKB6 136 aa11.66□□□□□ -0.54
HSPG2-211ENST00000486901 PTHLHP12272 177 aa11.66□□□□□ -0.54
HSPG2-211ENST00000486901 HSD3B1P14060 373 aa11.66□□□□□ -0.54
HSPG2-211ENST00000486901 CRYZQ08257 329 aaKnown RBP11.66□□□□□ -0.54
HSPG2-211ENST00000486901 CAMK1Q14012 370 aa11.66□□□□□ -0.54
HSPG2-211ENST00000486901 GPNMBQ14956 572 aa11.66□□□□□ -0.54
HSPG2-211ENST00000486901 PLK5Q496M5 336 aa11.66□□□□□ -0.54
HSPG2-211ENST00000486901 ZNF628Q5EBL2 1059 aa11.66□□□□□ -0.54
HSPG2-211ENST00000486901 CPA6Q8N4T0 437 aa11.66□□□□□ -0.54
HSPG2-211ENST00000486901 PCSK9Q8NBP7 692 aaKnown RBP11.66□□□□□ -0.54
HSPG2-211ENST00000486901 OR51L1Q8NGJ5 315 aa11.66□□□□□ -0.54
HSPG2-211ENST00000486901 TEX47Q8TBZ9 253 aa11.66□□□□□ -0.54
HSPG2-211ENST00000486901 SLC5A11Q8WWX8 675 aa11.66□□□□□ -0.54
HSPG2-211ENST00000486901 RNF32Q9H0A6 362 aa11.66□□□□□ -0.54
HSPG2-211ENST00000486901 MRPL17Q9NRX2 175 aaKnown RBP11.66□□□□□ -0.54
HSPG2-211ENST00000486901 EIF3KQ9UBQ5 218 aaKnown RBP11.66□□□□□ -0.54
HSPG2-211ENST00000486901 SPATA2Q9UM82 520 aa11.66□□□□□ -0.54
HSPG2-211ENST00000486901 MGAT4BQ9UQ53 548 aa11.66□□□□□ -0.54
HSPG2-211ENST00000486901 TMPRSS11DO60235 418 aa11.66□□□□□ -0.54
HSPG2-211ENST00000486901 SLCO2B1O94956 709 aa11.66□□□□□ -0.54
HSPG2-211ENST00000486901 EIF4EP06730 217 aaKnown RBP11.66□□□□□ -0.54
HSPG2-211ENST00000486901 HMGA2P52926 109 aa11.66□□□□□ -0.54
HSPG2-211ENST00000486901 HCCSP53701 268 aa11.66□□□□□ -0.54
HSPG2-211ENST00000486901 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.66□□□□□ -0.54
HSPG2-211ENST00000486901 SLC8B1Q6J4K2 584 aa11.66□□□□□ -0.54
HSPG2-211ENST00000486901 NKAIN4Q8IVV8 208 aa11.66□□□□□ -0.54
HSPG2-211ENST00000486901 GPR135Q8IZ08 494 aa11.66□□□□□ -0.54
HSPG2-211ENST00000486901 RIT1Q92963 219 aa11.66□□□□□ -0.54
HSPG2-211ENST00000486901 NCKAP1Q9Y2A7 1128 aa11.66□□□□□ -0.54
HSPG2-211ENST00000486901 COL4A4P53420 1690 aaPredicted RBP11.66□□□□□ -0.54
HSPG2-211ENST00000486901 A0A087WUU8 490 aa11.66□□□□□ -0.54
HSPG2-211ENST00000486901 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.66□□□□□ -0.54
HSPG2-211ENST00000486901 NPIPB8E9PQR5 432 aa11.66□□□□□ -0.54
HSPG2-211ENST00000486901 ARHGEF15O94989 841 aa11.66□□□□□ -0.54
HSPG2-211ENST00000486901 POP4O95707 220 aaKnown RBP11.66□□□□□ -0.54
HSPG2-211ENST00000486901 ALDH1A1P00352 501 aa11.66□□□□□ -0.54
HSPG2-211ENST00000486901 GIFP27352 417 aa11.66□□□□□ -0.54
HSPG2-211ENST00000486901 EPHB3P54753 998 aa11.66□□□□□ -0.54
HSPG2-211ENST00000486901 MESP2Q0VG99 397 aa11.66□□□□□ -0.54
HSPG2-211ENST00000486901 SREBF2Q12772 1141 aa11.66□□□□□ -0.54
HSPG2-211ENST00000486901 KLHL22Q53GT1 634 aa11.66□□□□□ -0.54
HSPG2-211ENST00000486901 SFRP4Q6FHJ7 346 aaPredicted RBP11.66□□□□□ -0.54
HSPG2-211ENST00000486901 TMEM91Q6ZNR0 172 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms