RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 NINQ8N4C6 2090 aa20.44■□□□□ 0.86
SREBF1-214ENST00000486311 FRG2CA6NGY1 282 aa20.44■□□□□ 0.86
SREBF1-214ENST00000486311 ESRRBO95718 433 aa20.44■□□□□ 0.86
SREBF1-214ENST00000486311 IL3P08700 152 aa20.44■□□□□ 0.86
SREBF1-214ENST00000486311 DRD2P14416 443 aa20.44■□□□□ 0.86
SREBF1-214ENST00000486311 ATP5F1P24539 256 aaPredicted RBP20.44■□□□□ 0.86
SREBF1-214ENST00000486311 ZNF136P52737 540 aa20.44■□□□□ 0.86
SREBF1-214ENST00000486311 NAGLUP54802 743 aa20.44■□□□□ 0.86
SREBF1-214ENST00000486311 RAE1P78406 368 aaKnown RBP20.44■□□□□ 0.86
SREBF1-214ENST00000486311 TRMT10CQ7L0Y3 403 aaKnown RBP20.44■□□□□ 0.86
SREBF1-214ENST00000486311 YRDCQ86U90 279 aaKnown RBP20.44■□□□□ 0.86
SREBF1-214ENST00000486311 METTL6Q8TCB7 284 aa20.44■□□□□ 0.86
SREBF1-214ENST00000486311 NRGNQ92686 78 aa20.44■□□□□ 0.86
SREBF1-214ENST00000486311 ERP27Q96DN0 273 aa20.44■□□□□ 0.86
SREBF1-214ENST00000486311 ACPTQ9BZG2 426 aa20.44■□□□□ 0.86
SREBF1-214ENST00000486311 GALNT9Q9HCQ5 603 aa20.44■□□□□ 0.86
SREBF1-214ENST00000486311 EHD3Q9NZN3 535 aa20.44■□□□□ 0.86
SREBF1-214ENST00000486311 KLRF1Q9NZS2 232 aa20.44■□□□□ 0.86
SREBF1-214ENST00000486311 CRIM1Q9NZV1 1036 aa20.44■□□□□ 0.86
SREBF1-214ENST00000486311 NFU1Q9UMS0 254 aa20.44■□□□□ 0.86
SREBF1-214ENST00000486311 DLGAP4Q9Y2H0 992 aa20.44■□□□□ 0.86
SREBF1-214ENST00000486311 STK38LQ9Y2H1 464 aa20.44■□□□□ 0.86
SREBF1-214ENST00000486311 FAM221AA4D161 298 aa20.43■□□□□ 0.86
SREBF1-214ENST00000486311 MBD3L4A6NDZ8 208 aaPredicted RBP20.43■□□□□ 0.86
SREBF1-214ENST00000486311 MBD3L3A6NE82 208 aaPredicted RBP20.43■□□□□ 0.86
SREBF1-214ENST00000486311 PRAMEF25A6NGN4 478 aa20.43■□□□□ 0.86
SREBF1-214ENST00000486311 MBD3L5A6NJ08 208 aaPredicted RBP20.43■□□□□ 0.86
SREBF1-214ENST00000486311 PCDH7O60245 1069 aa20.43■□□□□ 0.86
SREBF1-214ENST00000486311 BCAS2O75934 225 aaPredicted RBP20.43■□□□□ 0.86
SREBF1-214ENST00000486311 ACTL6AO96019 429 aa20.43■□□□□ 0.86
SREBF1-214ENST00000486311 HMOX2P30519 316 aa20.43■□□□□ 0.86
SREBF1-214ENST00000486311 ART1P52961 327 aa20.43■□□□□ 0.86
SREBF1-214ENST00000486311 PRKAA2P54646 552 aa20.43■□□□□ 0.86
SREBF1-214ENST00000486311 CCDC116Q8IYX3 515 aa20.43■□□□□ 0.86
SREBF1-214ENST00000486311 SAMD14Q8IZD0 417 aaPredicted RBP20.43■□□□□ 0.86
SREBF1-214ENST00000486311 LRRN4CLQ8ND94 238 aa20.43■□□□□ 0.86
SREBF1-214ENST00000486311 MBD3L2Q8NHZ7 208 aaPredicted RBP20.43■□□□□ 0.86
SREBF1-214ENST00000486311 BTBD9Q96Q07 612 aa20.43■□□□□ 0.86
SREBF1-214ENST00000486311 TRIB1Q96RU8 372 aa20.43■□□□□ 0.86
SREBF1-214ENST00000486311 CALHM2Q9HA72 323 aa20.43■□□□□ 0.86
SREBF1-214ENST00000486311 PFDN4Q9NQP4 134 aa20.43■□□□□ 0.86
SREBF1-214ENST00000486311 FOXD3Q9UJU5 478 aaPredicted RBP20.43■□□□□ 0.86
SREBF1-214ENST00000486311 EXO1Q9UQ84 846 aaKnown RBP20.43■□□□□ 0.86
SREBF1-214ENST00000486311 C2orf72A6NCS6 295 aa20.42■□□□□ 0.86
SREBF1-214ENST00000486311 OR6C70A6NIJ9 312 aa20.42■□□□□ 0.86
SREBF1-214ENST00000486311 RIPK2O43353 540 aa20.42■□□□□ 0.86
SREBF1-214ENST00000486311 CBR3O75828 277 aa20.42■□□□□ 0.86
SREBF1-214ENST00000486311 ENO1P06733 434 aaKnown RBP20.42■□□□□ 0.86
SREBF1-214ENST00000486311 GCKP35557 465 aa20.42■□□□□ 0.86
SREBF1-214ENST00000486311 HTR6P50406 440 aa20.42■□□□□ 0.86
SREBF1-214ENST00000486311 PKNOX1P55347 436 aa20.42■□□□□ 0.86
SREBF1-214ENST00000486311 LCP2Q13094 533 aa20.42■□□□□ 0.86
SREBF1-214ENST00000486311 SPIN4Q56A73 249 aa20.42■□□□□ 0.86
SREBF1-214ENST00000486311 SLC22A9Q8IVM8 553 aa20.42■□□□□ 0.86
SREBF1-214ENST00000486311 IFT20Q8IY31 132 aa20.42■□□□□ 0.86
SREBF1-214ENST00000486311 WDSUB1Q8N9V3 476 aa20.42■□□□□ 0.86
SREBF1-214ENST00000486311 ZPLD1Q8TCW7 415 aa20.42■□□□□ 0.86
SREBF1-214ENST00000486311 FAM222BQ8WU58 562 aa20.42■□□□□ 0.86
SREBF1-214ENST00000486311 TMBIM1Q969X1 311 aa20.42■□□□□ 0.86
SREBF1-214ENST00000486311 L3HYPDHQ96EM0 354 aa20.42■□□□□ 0.86
SREBF1-214ENST00000486311 SLC35A4Q96G79 324 aa20.42■□□□□ 0.86
SREBF1-214ENST00000486311 APIPQ96GX9 242 aa20.42■□□□□ 0.86
SREBF1-214ENST00000486311 COL21A1Q96P44 957 aa20.42■□□□□ 0.86
SREBF1-214ENST00000486311 RHOXF2Q9BQY4 288 aa20.42■□□□□ 0.86
SREBF1-214ENST00000486311 POLDIP3Q9BY77 421 aaKnown RBP20.42■□□□□ 0.86
SREBF1-214ENST00000486311 OR2B2Q9GZK3 357 aa20.42■□□□□ 0.86
SREBF1-214ENST00000486311 SERHLQ9NQF3 203 aa20.42■□□□□ 0.86
SREBF1-214ENST00000486311 RASSF1Q9NS23 344 aa20.42■□□□□ 0.86
SREBF1-214ENST00000486311 MAPRE3Q9UPY8 281 aa20.42■□□□□ 0.86
SREBF1-214ENST00000486311 GNG14A0A1W2PPG7 69 aa20.41■□□□□ 0.86
SREBF1-214ENST00000486311 ABCB7O75027 752 aa20.41■□□□□ 0.86
SREBF1-214ENST00000486311 CPN1P15169 458 aa20.41■□□□□ 0.86
SREBF1-214ENST00000486311 CTSSP25774 331 aa20.41■□□□□ 0.86
SREBF1-214ENST00000486311 IST1P53990 364 aa20.41■□□□□ 0.86
SREBF1-214ENST00000486311 HMGCS1Q01581 520 aa20.41■□□□□ 0.86
SREBF1-214ENST00000486311 ACSM2AQ08AH3 577 aa20.41■□□□□ 0.86
SREBF1-214ENST00000486311 HEPACAMQ14CZ8 416 aa20.41■□□□□ 0.86
SREBF1-214ENST00000486311 CEBPEQ15744 281 aa20.41■□□□□ 0.86
SREBF1-214ENST00000486311 FLYWCH1Q4VC44 716 aa20.41■□□□□ 0.86
SREBF1-214ENST00000486311 ACSM2BQ68CK6 577 aa20.41■□□□□ 0.86
SREBF1-214ENST00000486311 GALNT18Q6P9A2 607 aa20.41■□□□□ 0.86
SREBF1-214ENST00000486311 OR9A2Q8NGT5 310 aa20.41■□□□□ 0.86
SREBF1-214ENST00000486311 ACMSDQ8TDX5 336 aa20.41■□□□□ 0.86
SREBF1-214ENST00000486311 C16orf78Q8WTQ4 265 aa20.41■□□□□ 0.86
SREBF1-214ENST00000486311 NINJ1Q92982 152 aa20.41■□□□□ 0.86
SREBF1-214ENST00000486311 EXOSC8Q96B26 276 aaKnown RBP20.41■□□□□ 0.86
SREBF1-214ENST00000486311 TMCO6Q96DC7 493 aa20.41■□□□□ 0.86
SREBF1-214ENST00000486311 C11orf24Q96F05 449 aaPredicted RBP20.41■□□□□ 0.86
SREBF1-214ENST00000486311 GPATCH1Q9BRR8 931 aaKnown RBP20.41■□□□□ 0.86
SREBF1-214ENST00000486311 EPB41L4BQ9H329 900 aa20.41■□□□□ 0.86
SREBF1-214ENST00000486311 ANKRA2Q9H9E1 313 aa20.41■□□□□ 0.86
SREBF1-214ENST00000486311 SETD2Q9BYW2 2564 aaPredicted RBP20.41■□□□□ 0.86
SREBF1-214ENST00000486311 ZFHX3Q15911 3703 aa20.41■□□□□ 0.86
SREBF1-214ENST00000486311 IL18BPO95998 194 aa20.4■□□□□ 0.86
SREBF1-214ENST00000486311 TUBBP07437 444 aa20.4■□□□□ 0.86
SREBF1-214ENST00000486311 GSTA1P08263 222 aa20.4■□□□□ 0.86
SREBF1-214ENST00000486311 CT45A8P0DMV1 189 aa20.4■□□□□ 0.86
SREBF1-214ENST00000486311 CT45A9P0DMV2 189 aa20.4■□□□□ 0.86
SREBF1-214ENST00000486311 TIA1P31483 386 aaKnown RBP eCLIP20.4■□□□□ 0.86
SREBF1-214ENST00000486311 OPRM1P35372 400 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms