RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 INTS10Q9NVR2 710 aaKnown RBP7.34□□□□□ -1.23
XRN1-212ENST00000486211 MOCS1Q9NZB8 636 aa7.34□□□□□ -1.23
XRN1-212ENST00000486211 TMEFF2Q9UIK5 374 aaPredicted RBP7.34□□□□□ -1.23
XRN1-212ENST00000486211 FBXL2Q9UKC9 423 aa7.34□□□□□ -1.23
XRN1-212ENST00000486211 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.34□□□□□ -1.23
XRN1-212ENST00000486211 C2orf92A0A1B0GVN3 265 aa7.33□□□□□ -1.24
XRN1-212ENST00000486211 PFDN6O15212 129 aa7.33□□□□□ -1.24
XRN1-212ENST00000486211 CLEC3AO75596 197 aa7.33□□□□□ -1.24
XRN1-212ENST00000486211 TJP3O95049 919 aa7.33□□□□□ -1.24
XRN1-212ENST00000486211 AIFM1O95831 613 aa7.33□□□□□ -1.24
XRN1-212ENST00000486211 EPHA1P21709 976 aa7.33□□□□□ -1.24
XRN1-212ENST00000486211 ABCD3P28288 659 aa7.33□□□□□ -1.24
XRN1-212ENST00000486211 CTNNA1P35221 906 aaKnown RBP7.33□□□□□ -1.24
XRN1-212ENST00000486211 FDFT1P37268 417 aa7.33□□□□□ -1.24
XRN1-212ENST00000486211 RBMXP38159 391 aaKnown RBP7.33□□□□□ -1.24
XRN1-212ENST00000486211 EFNA4P52798 201 aa7.33□□□□□ -1.24
XRN1-212ENST00000486211 ARFIP2P53365 341 aa7.33□□□□□ -1.24
XRN1-212ENST00000486211 SUCLG1P53597 346 aaKnown RBP7.33□□□□□ -1.24
XRN1-212ENST00000486211 CDH11P55287 796 aa7.33□□□□□ -1.24
XRN1-212ENST00000486211 PLIN5Q00G26 463 aa7.33□□□□□ -1.24
XRN1-212ENST00000486211 LGALS3BPQ08380 585 aa7.33□□□□□ -1.24
XRN1-212ENST00000486211 SNTA1Q13424 505 aa7.33□□□□□ -1.24
XRN1-212ENST00000486211 PON3Q15166 354 aa7.33□□□□□ -1.24
XRN1-212ENST00000486211 RAB35Q15286 201 aa7.33□□□□□ -1.24
XRN1-212ENST00000486211 ADNP2Q6IQ32 1131 aa7.33□□□□□ -1.24
XRN1-212ENST00000486211 CHMP1BQ7LBR1 199 aa7.33□□□□□ -1.24
XRN1-212ENST00000486211 UBE3DQ7Z6J8 389 aa7.33□□□□□ -1.24
XRN1-212ENST00000486211 UBQLNLQ8IYU4 475 aa7.33□□□□□ -1.24
XRN1-212ENST00000486211 SNX31Q8N9S9 440 aa7.33□□□□□ -1.24
XRN1-212ENST00000486211 C3orf49Q96BT1 292 aa7.33□□□□□ -1.24
XRN1-212ENST00000486211 RBM18Q96H35 190 aaKnown RBP7.33□□□□□ -1.24
XRN1-212ENST00000486211 HBEGFQ99075 208 aa7.33□□□□□ -1.24
XRN1-212ENST00000486211 ANP32EQ9BTT0 268 aa7.33□□□□□ -1.24
XRN1-212ENST00000486211 RBM4Q9BWF3 364 aaKnown RBP7.33□□□□□ -1.24
XRN1-212ENST00000486211 REXO4Q9GZR2 422 aaKnown RBP7.33□□□□□ -1.24
XRN1-212ENST00000486211 IL22Q9GZX6 179 aa7.33□□□□□ -1.24
XRN1-212ENST00000486211 CBLN4Q9NTU7 201 aa7.33□□□□□ -1.24
XRN1-212ENST00000486211 ARL15Q9NXU5 204 aa7.33□□□□□ -1.24
XRN1-212ENST00000486211 WBP11Q9Y2W2 641 aaKnown RBP7.33□□□□□ -1.24
XRN1-212ENST00000486211 MRPS18CQ9Y3D5 142 aaKnown RBP7.33□□□□□ -1.24
XRN1-212ENST00000486211 CMYA5Q8N3K9 4069 aa7.32□□□□□ -1.24
XRN1-212ENST00000486211 GOLGA6L9A6NEM1 432 aa7.32□□□□□ -1.24
XRN1-212ENST00000486211 A6NHS1 94 aa7.32□□□□□ -1.24
XRN1-212ENST00000486211 SMAD9O15198 467 aaKnown RBP7.32□□□□□ -1.24
XRN1-212ENST00000486211 AKR1B10O60218 316 aa7.32□□□□□ -1.24
XRN1-212ENST00000486211 SS18L1O75177 396 aaPredicted RBP7.32□□□□□ -1.24
XRN1-212ENST00000486211 GCM2O75603 506 aaPredicted RBP7.32□□□□□ -1.24
XRN1-212ENST00000486211 PPM1BO75688 479 aa7.32□□□□□ -1.24
XRN1-212ENST00000486211 TGFB1P01137 390 aa7.32□□□□□ -1.24
XRN1-212ENST00000486211 ALDOAP04075 364 aaKnown RBP7.32□□□□□ -1.24
XRN1-212ENST00000486211 APRTP07741 180 aa7.32□□□□□ -1.24
XRN1-212ENST00000486211 PEPDP12955 493 aa7.32□□□□□ -1.24
XRN1-212ENST00000486211 ALOX15P16050 662 aaPredicted RBP7.32□□□□□ -1.24
XRN1-212ENST00000486211 ZNF23P17027 643 aa7.32□□□□□ -1.24
XRN1-212ENST00000486211 TCEA1P23193 301 aaKnown RBP7.32□□□□□ -1.24
XRN1-212ENST00000486211 ATP5A1P25705 553 aaKnown RBP7.32□□□□□ -1.24
XRN1-212ENST00000486211 TTKP33981 857 aa7.32□□□□□ -1.24
XRN1-212ENST00000486211 SLC6A8P48029 635 aa7.32□□□□□ -1.24
XRN1-212ENST00000486211 AP1S2P56377 157 aa7.32□□□□□ -1.24
XRN1-212ENST00000486211 HILS1P60008 231 aa7.32□□□□□ -1.24
XRN1-212ENST00000486211 RPS13P62277 151 aaKnown RBP7.32□□□□□ -1.24
XRN1-212ENST00000486211 IRF9Q00978 393 aa7.32□□□□□ -1.24
XRN1-212ENST00000486211 DOC2AQ14183 400 aa7.32□□□□□ -1.24
XRN1-212ENST00000486211 TSC22D1Q15714 1073 aa7.32□□□□□ -1.24
XRN1-212ENST00000486211 LRRC8EQ6NSJ5 796 aa7.32□□□□□ -1.24
XRN1-212ENST00000486211 C11orf63Q6NUN7 778 aa7.32□□□□□ -1.24
XRN1-212ENST00000486211 NEPROQ6NW34 567 aa7.32□□□□□ -1.24
XRN1-212ENST00000486211 SASS6Q6UVJ0 657 aa7.32□□□□□ -1.24
XRN1-212ENST00000486211 TMIGD1Q6UXZ0 262 aa7.32□□□□□ -1.24
XRN1-212ENST00000486211 BEND4Q6ZU67 534 aa7.32□□□□□ -1.24
XRN1-212ENST00000486211 PRUNE1Q86TP1 453 aa7.32□□□□□ -1.24
XRN1-212ENST00000486211 THOC6Q86W42 341 aaKnown RBP7.32□□□□□ -1.24
XRN1-212ENST00000486211 PLCZ1Q86YW0 608 aa7.32□□□□□ -1.24
XRN1-212ENST00000486211 DENND6AQ8IWF6 608 aa7.32□□□□□ -1.24
XRN1-212ENST00000486211 ST13P4Q8IZP2 240 aaPredicted RBP7.32□□□□□ -1.24
XRN1-212ENST00000486211 ZNF619Q8N2I2 560 aa7.32□□□□□ -1.24
XRN1-212ENST00000486211 C7orf57Q8NEG2 295 aa7.32□□□□□ -1.24
XRN1-212ENST00000486211 STEAP2Q8NFT2 490 aa7.32□□□□□ -1.24
XRN1-212ENST00000486211 TTLQ8NG68 377 aa7.32□□□□□ -1.24
XRN1-212ENST00000486211 CCT6BQ92526 530 aa7.32□□□□□ -1.24
XRN1-212ENST00000486211 ALG3Q92685 438 aa7.32□□□□□ -1.24
XRN1-212ENST00000486211 COPS7BQ9H9Q2 264 aaPredicted RBP7.32□□□□□ -1.24
XRN1-212ENST00000486211 NGBQ9NPG2 151 aa7.32□□□□□ -1.24
XRN1-212ENST00000486211 FBXO6Q9NRD1 293 aaPredicted RBP7.32□□□□□ -1.24
XRN1-212ENST00000486211 DNAJC11Q9NVH1 559 aa7.32□□□□□ -1.24
XRN1-212ENST00000486211 SYBUQ9NX95 663 aa7.32□□□□□ -1.24
XRN1-212ENST00000486211 CLEC4AQ9UMR7 237 aa7.32□□□□□ -1.24
XRN1-212ENST00000486211 SNX8Q9Y5X2 465 aa7.32□□□□□ -1.24
XRN1-212ENST00000486211 PLCE1Q9P212 2302 aa7.32□□□□□ -1.24
XRN1-212ENST00000486211 PRAMEF25A6NGN4 478 aa7.31□□□□□ -1.24
XRN1-212ENST00000486211 E7EQL1 145 aa7.31□□□□□ -1.24
XRN1-212ENST00000486211 E7EVH7 732 aa7.31□□□□□ -1.24
XRN1-212ENST00000486211 TRIM77I1YAP6 450 aa7.31□□□□□ -1.24
XRN1-212ENST00000486211 NDUFS8O00217 210 aa7.31□□□□□ -1.24
XRN1-212ENST00000486211 SCELO95171 688 aa7.31□□□□□ -1.24
XRN1-212ENST00000486211 HIST1H2AGP0C0S8 130 aaPredicted RBP7.31□□□□□ -1.24
XRN1-212ENST00000486211 HIST1H2ADP20671 130 aa7.31□□□□□ -1.24
XRN1-212ENST00000486211 CNTFP26441 200 aa7.31□□□□□ -1.24
XRN1-212ENST00000486211 MGAT1P26572 445 aa7.31□□□□□ -1.24
XRN1-212ENST00000486211 GSTM2P28161 218 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms