RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 MAPRE3Q9UPY8 281 aa11.47□□□□□ -0.57
HMG20B-211ENST00000486028 DTX4Q9Y2E6 619 aa11.47□□□□□ -0.57
HMG20B-211ENST00000486028 GPR55Q9Y2T6 319 aaPredicted RBP11.47□□□□□ -0.57
HMG20B-211ENST00000486028 FRG2CA6NGY1 282 aa11.46□□□□□ -0.57
HMG20B-211ENST00000486028 G3V3Y1 287 aa11.46□□□□□ -0.57
HMG20B-211ENST00000486028 TFECO14948 347 aaPredicted RBP11.46□□□□□ -0.57
HMG20B-211ENST00000486028 SCAMP2O15127 329 aaKnown RBP11.46□□□□□ -0.57
HMG20B-211ENST00000486028 TO15178 435 aa11.46□□□□□ -0.57
HMG20B-211ENST00000486028 UNC5CO95185 931 aa11.46□□□□□ -0.57
HMG20B-211ENST00000486028 CCL3P10147 92 aa11.46□□□□□ -0.57
HMG20B-211ENST00000486028 KITP10721 976 aa11.46□□□□□ -0.57
HMG20B-211ENST00000486028 G6PDP11413 515 aa11.46□□□□□ -0.57
HMG20B-211ENST00000486028 ABCD3P28288 659 aa11.46□□□□□ -0.57
HMG20B-211ENST00000486028 MC3RP41968 323 aa11.46□□□□□ -0.57
HMG20B-211ENST00000486028 CLDN8P56748 225 aa11.46□□□□□ -0.57
HMG20B-211ENST00000486028 FBXW4P57775 412 aa11.46□□□□□ -0.57
HMG20B-211ENST00000486028 PLGLB1Q02325 96 aa11.46□□□□□ -0.57
HMG20B-211ENST00000486028 SRSF11Q05519 484 aaKnown RBP11.46□□□□□ -0.57
HMG20B-211ENST00000486028 RBPJQ06330 500 aa11.46□□□□□ -0.57
HMG20B-211ENST00000486028 HSPB3Q12988 150 aa11.46□□□□□ -0.57
HMG20B-211ENST00000486028 PTGR1Q14914 329 aa11.46□□□□□ -0.57
HMG20B-211ENST00000486028 NNATQ16517 81 aa11.46□□□□□ -0.57
HMG20B-211ENST00000486028 ZNF385BQ569K4 471 aa11.46□□□□□ -0.57
HMG20B-211ENST00000486028 RNFT1Q5M7Z0 435 aa11.46□□□□□ -0.57
HMG20B-211ENST00000486028 RGS9BPQ6ZS82 235 aa11.46□□□□□ -0.57
HMG20B-211ENST00000486028 NUP54Q7Z3B4 507 aa11.46□□□□□ -0.57
HMG20B-211ENST00000486028 SIAH3Q8IW03 269 aa11.46□□□□□ -0.57
HMG20B-211ENST00000486028 OR2L13Q8N349 312 aa11.46□□□□□ -0.57
HMG20B-211ENST00000486028 OR7A2PQ8NGA2 310 aa11.46□□□□□ -0.57
HMG20B-211ENST00000486028 LRRC8CQ8TDW0 803 aa11.46□□□□□ -0.57
HMG20B-211ENST00000486028 DYDC1Q8WWB3 177 aa11.46□□□□□ -0.57
HMG20B-211ENST00000486028 COQ8BQ96D53 544 aa11.46□□□□□ -0.57
HMG20B-211ENST00000486028 MAGED4Q96JG8 741 aa11.46□□□□□ -0.57
HMG20B-211ENST00000486028 VSTM2LQ96N03 204 aa11.46□□□□□ -0.57
HMG20B-211ENST00000486028 BTBD9Q96Q07 612 aa11.46□□□□□ -0.57
HMG20B-211ENST00000486028 SECISBP2Q96T21 854 aaKnown RBP11.46□□□□□ -0.57
HMG20B-211ENST00000486028 TSPAN10Q9H1Z9 355 aaPredicted RBP11.46□□□□□ -0.57
HMG20B-211ENST00000486028 FOLH1BQ9HBA9 442 aa11.46□□□□□ -0.57
HMG20B-211ENST00000486028 DEPPQ9NTK1 212 aa11.46□□□□□ -0.57
HMG20B-211ENST00000486028 MARCOQ9UEW3 520 aaPredicted RBP11.46□□□□□ -0.57
HMG20B-211ENST00000486028 LRRK2Q5S007 2527 aa11.46□□□□□ -0.58
HMG20B-211ENST00000486028 A0A0G2JMM0 328 aa11.45□□□□□ -0.58
HMG20B-211ENST00000486028 A0A1W2PPB8 328 aa11.45□□□□□ -0.58
HMG20B-211ENST00000486028 A0A1W2PRB8 838 aa11.45□□□□□ -0.58
HMG20B-211ENST00000486028 A0A1W2PRS3 328 aa11.45□□□□□ -0.58
HMG20B-211ENST00000486028 ANKRD33BA6NCL7 494 aa11.45□□□□□ -0.58
HMG20B-211ENST00000486028 KIR3DP1A8MWS1 328 aa11.45□□□□□ -0.58
HMG20B-211ENST00000486028 ACOT7O00154 380 aa11.45□□□□□ -0.58
HMG20B-211ENST00000486028 UPK1AO00322 258 aa11.45□□□□□ -0.58
HMG20B-211ENST00000486028 ASNA1O43681 348 aa11.45□□□□□ -0.58
HMG20B-211ENST00000486028 ERN1O75460 977 aaKnown RBP11.45□□□□□ -0.58
HMG20B-211ENST00000486028 PPM1BO75688 479 aa11.45□□□□□ -0.58
HMG20B-211ENST00000486028 ABCB1P08183 1280 aaPredicted RBP11.45□□□□□ -0.58
HMG20B-211ENST00000486028 LAMP1P11279 417 aa11.45□□□□□ -0.58
HMG20B-211ENST00000486028 KRT20P35900 424 aa11.45□□□□□ -0.58
HMG20B-211ENST00000486028 PIGAP37287 484 aa11.45□□□□□ -0.58
HMG20B-211ENST00000486028 RFC3P40938 356 aa11.45□□□□□ -0.58
HMG20B-211ENST00000486028 FRKP42685 505 aaPredicted RBP11.45□□□□□ -0.58
HMG20B-211ENST00000486028 KCNK10P57789 538 aa11.45□□□□□ -0.58
HMG20B-211ENST00000486028 C21orf58P58505 322 aa11.45□□□□□ -0.58
HMG20B-211ENST00000486028 PPIAP62937 165 aaKnown RBP11.45□□□□□ -0.58
HMG20B-211ENST00000486028 PPP2R2AP63151 447 aa11.45□□□□□ -0.58
HMG20B-211ENST00000486028 KCNJ2P63252 427 aa11.45□□□□□ -0.58
HMG20B-211ENST00000486028 PLCXD2Q0VAA5 305 aa11.45□□□□□ -0.58
HMG20B-211ENST00000486028 ZNF155Q12901 538 aaPredicted RBP11.45□□□□□ -0.58
HMG20B-211ENST00000486028 MLC1Q15049 377 aa11.45□□□□□ -0.58
HMG20B-211ENST00000486028 RPS6KA2Q15349 733 aa11.45□□□□□ -0.58
HMG20B-211ENST00000486028 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.45□□□□□ -0.58
HMG20B-211ENST00000486028 TBCELQ5QJ74 424 aa11.45□□□□□ -0.58
HMG20B-211ENST00000486028 BNC2Q6ZN30 1099 aaPredicted RBP11.45□□□□□ -0.58
HMG20B-211ENST00000486028 LARP4Q71RC2 724 aaKnown RBP eCLIP11.45□□□□□ -0.58
HMG20B-211ENST00000486028 SPATA19Q7Z5L4 167 aa11.45□□□□□ -0.58
HMG20B-211ENST00000486028 SLC22A16Q86VW1 577 aa11.45□□□□□ -0.58
HMG20B-211ENST00000486028 WDR75Q8IWA0 830 aaKnown RBP11.45□□□□□ -0.58
HMG20B-211ENST00000486028 RIMKLAQ8IXN7 391 aa11.45□□□□□ -0.58
HMG20B-211ENST00000486028 PRR22Q8IZ63 422 aa11.45□□□□□ -0.58
HMG20B-211ENST00000486028 SLC34A3Q8N130 599 aa11.45□□□□□ -0.58
HMG20B-211ENST00000486028 FBXW8Q8N3Y1 598 aa11.45□□□□□ -0.58
HMG20B-211ENST00000486028 FAM26EQ8N5C1 309 aa11.45□□□□□ -0.58
HMG20B-211ENST00000486028 KRTCAP2Q8N6L1 136 aa11.45□□□□□ -0.58
HMG20B-211ENST00000486028 CEP70Q8NHQ1 597 aa11.45□□□□□ -0.58
HMG20B-211ENST00000486028 SPPL2AQ8TCT8 520 aa11.45□□□□□ -0.58
HMG20B-211ENST00000486028 DIO2Q92813 273 aa11.45□□□□□ -0.58
HMG20B-211ENST00000486028 OMA1Q96E52 524 aa11.45□□□□□ -0.58
HMG20B-211ENST00000486028 GPR137Q96N19 417 aa11.45□□□□□ -0.58
HMG20B-211ENST00000486028 IL1RL2Q9HB29 575 aa11.45□□□□□ -0.58
HMG20B-211ENST00000486028 C3orf14Q9HBI5 128 aa11.45□□□□□ -0.58
HMG20B-211ENST00000486028 INTS9Q9NV88 658 aaKnown RBP11.45□□□□□ -0.58
HMG20B-211ENST00000486028 CNOT11Q9UKZ1 510 aaKnown RBP11.45□□□□□ -0.58
HMG20B-211ENST00000486028 BOKQ9UMX3 212 aaPredicted RBP11.45□□□□□ -0.58
HMG20B-211ENST00000486028 OSGIN2Q9Y236 505 aa11.45□□□□□ -0.58
HMG20B-211ENST00000486028 CHCHD2Q9Y6H1 151 aaPredicted RBP11.45□□□□□ -0.58
HMG20B-211ENST00000486028 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.45□□□□□ -0.58
HMG20B-211ENST00000486028 ZGRF1Q86YA3 2104 aa11.45□□□□□ -0.58
HMG20B-211ENST00000486028 SPENQ96T58 3664 aaKnown RBP11.45□□□□□ -0.58
HMG20B-211ENST00000486028 PINLYPA6NC86 204 aa11.44□□□□□ -0.58
HMG20B-211ENST00000486028 TTC36A6NLP5 189 aa11.44□□□□□ -0.58
HMG20B-211ENST00000486028 VGLL3A8MV65 326 aa11.44□□□□□ -0.58
HMG20B-211ENST00000486028 EBAG9O00559 213 aa11.44□□□□□ -0.58
HMG20B-211ENST00000486028 SDHDO14521 159 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms