RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 TXNL4AP83876 142 aaKnown RBP16.29■□□□□ 0.2
CHMP3-207ENST00000485465 RGNQ15493 299 aa16.29■□□□□ 0.2
CHMP3-207ENST00000485465 ZNHIT3Q15649 155 aaPredicted RBP16.29■□□□□ 0.2
CHMP3-207ENST00000485465 DEFB109BQ30KR1 87 aa16.29■□□□□ 0.2
CHMP3-207ENST00000485465 RABL3Q5HYI8 236 aa16.29■□□□□ 0.2
CHMP3-207ENST00000485465 HLA-DQA1Q5Y7H0 255 aa16.29■□□□□ 0.2
CHMP3-207ENST00000485465 TNFAIP8L2Q6P589 184 aaPredicted RBP16.29■□□□□ 0.2
CHMP3-207ENST00000485465 GPR155Q7Z3F1 870 aa16.29■□□□□ 0.2
CHMP3-207ENST00000485465 ARPINQ7Z6K5 226 aa16.29■□□□□ 0.2
CHMP3-207ENST00000485465 PGAM4Q8N0Y7 254 aa16.29■□□□□ 0.2
CHMP3-207ENST00000485465 HORMAD2Q8N7B1 307 aa16.29■□□□□ 0.2
CHMP3-207ENST00000485465 SLC16A11Q8NCK7 471 aa16.29■□□□□ 0.2
CHMP3-207ENST00000485465 NUBPLQ8TB37 319 aa16.29■□□□□ 0.2
CHMP3-207ENST00000485465 FBXO30Q8TB52 745 aa16.29■□□□□ 0.2
CHMP3-207ENST00000485465 SLC9A6Q92581 669 aa16.29■□□□□ 0.2
CHMP3-207ENST00000485465 JADE3Q92613 823 aa16.29■□□□□ 0.2
CHMP3-207ENST00000485465 TMEM125Q96AQ2 219 aa16.29■□□□□ 0.2
CHMP3-207ENST00000485465 SLC7A6OSQ96CW6 309 aaPredicted RBP16.29■□□□□ 0.2
CHMP3-207ENST00000485465 BTBD9Q96Q07 612 aa16.29■□□□□ 0.2
CHMP3-207ENST00000485465 GAL3ST4Q96RP7 486 aa16.29■□□□□ 0.2
CHMP3-207ENST00000485465 C1orf21Q9H246 121 aa16.29■□□□□ 0.2
CHMP3-207ENST00000485465 OR51I1Q9H343 314 aa16.29■□□□□ 0.2
CHMP3-207ENST00000485465 TAS2R1Q9NYW7 299 aa16.29■□□□□ 0.2
CHMP3-207ENST00000485465 GPR55Q9Y2T6 319 aaPredicted RBP16.29■□□□□ 0.2
CHMP3-207ENST00000485465 TMEM200CA6NKL6 621 aa16.28■□□□□ 0.2
CHMP3-207ENST00000485465 K7ENP7 123 aa16.28■□□□□ 0.2
CHMP3-207ENST00000485465 ALOX5P09917 674 aa16.28■□□□□ 0.2
CHMP3-207ENST00000485465 CT45A8P0DMV1 189 aa16.28■□□□□ 0.2
CHMP3-207ENST00000485465 CT45A9P0DMV2 189 aa16.28■□□□□ 0.2
CHMP3-207ENST00000485465 ETFAP13804 333 aa16.28■□□□□ 0.2
CHMP3-207ENST00000485465 DRD5P21918 477 aa16.28■□□□□ 0.2
CHMP3-207ENST00000485465 CRATP43155 626 aa16.28■□□□□ 0.2
CHMP3-207ENST00000485465 KHKP50053 298 aa16.28■□□□□ 0.2
CHMP3-207ENST00000485465 ANXA11P50995 505 aaKnown RBP16.28■□□□□ 0.2
CHMP3-207ENST00000485465 SLC7A2P52569 658 aa16.28■□□□□ 0.2
CHMP3-207ENST00000485465 UCNP55089 124 aa16.28■□□□□ 0.2
CHMP3-207ENST00000485465 PSG6Q00889 435 aa16.28■□□□□ 0.2
CHMP3-207ENST00000485465 CHAF1BQ13112 559 aa16.28■□□□□ 0.2
CHMP3-207ENST00000485465 FADDQ13158 208 aa16.28■□□□□ 0.2
CHMP3-207ENST00000485465 CT45A2Q5DJT8 189 aa16.28■□□□□ 0.2
CHMP3-207ENST00000485465 JMJD6Q6NYC1 403 aaPredicted RBP16.28■□□□□ 0.2
CHMP3-207ENST00000485465 INO80CQ6PI98 192 aaPredicted RBP16.28■□□□□ 0.2
CHMP3-207ENST00000485465 NPSR1Q6W5P4 371 aa16.28■□□□□ 0.2
CHMP3-207ENST00000485465 SLC15A3Q8IY34 581 aa16.28■□□□□ 0.2
CHMP3-207ENST00000485465 DEFB107AQ8IZN7 70 aa16.28■□□□□ 0.2
CHMP3-207ENST00000485465 LGI4Q8N135 537 aa16.28■□□□□ 0.2
CHMP3-207ENST00000485465 ZNF441Q8N8Z8 693 aa16.28■□□□□ 0.2
CHMP3-207ENST00000485465 KDF1Q8NAX2 398 aaPredicted RBP16.28■□□□□ 0.2
CHMP3-207ENST00000485465 C17orf47Q8NEP4 570 aa16.28■□□□□ 0.2
CHMP3-207ENST00000485465 OR5D16Q8NGK9 328 aa16.28■□□□□ 0.2
CHMP3-207ENST00000485465 ADAMTS15Q8TE58 950 aa16.28■□□□□ 0.2
CHMP3-207ENST00000485465 THAP3Q8WTV1 239 aaPredicted RBP16.28■□□□□ 0.2
CHMP3-207ENST00000485465 TP53INP1Q96A56 240 aa16.28■□□□□ 0.2
CHMP3-207ENST00000485465 OTUB1Q96FW1 271 aaPredicted RBP16.28■□□□□ 0.2
CHMP3-207ENST00000485465 SLC35A4Q96G79 324 aa16.28■□□□□ 0.2
CHMP3-207ENST00000485465 THOC3Q96J01 351 aaKnown RBP16.28■□□□□ 0.2
CHMP3-207ENST00000485465 LCORQ96JN0 433 aaPredicted RBP16.28■□□□□ 0.2
CHMP3-207ENST00000485465 OR7D2Q96RA2 312 aa16.28■□□□□ 0.2
CHMP3-207ENST00000485465 STACQ99469 402 aa16.28■□□□□ 0.2
CHMP3-207ENST00000485465 ING2Q9H160 280 aa16.28■□□□□ 0.2
CHMP3-207ENST00000485465 PIGUQ9H490 435 aa16.28■□□□□ 0.2
CHMP3-207ENST00000485465 KAT8Q9H7Z6 458 aaKnown RBP16.28■□□□□ 0.2
CHMP3-207ENST00000485465 CMTM6Q9NX76 183 aa16.28■□□□□ 0.2
CHMP3-207ENST00000485465 GIN1Q9NXP7 522 aa16.28■□□□□ 0.2
CHMP3-207ENST00000485465 AP3M1Q9Y2T2 418 aa16.28■□□□□ 0.2
CHMP3-207ENST00000485465 L3MBTL1Q9Y468 752 aa16.28■□□□□ 0.2
CHMP3-207ENST00000485465 NUP214P35658 2090 aaPredicted RBP16.27■□□□□ 0.2
CHMP3-207ENST00000485465 FRG2CA6NGY1 282 aa16.27■□□□□ 0.2
CHMP3-207ENST00000485465 DUXAA6NLW8 204 aa16.27■□□□□ 0.2
CHMP3-207ENST00000485465 A8MUI8 341 aa16.27■□□□□ 0.2
CHMP3-207ENST00000485465 ASNA1O43681 348 aa16.27■□□□□ 0.2
CHMP3-207ENST00000485465 SOX30O94993 753 aa16.27■□□□□ 0.2
CHMP3-207ENST00000485465 NKX2-2O95096 273 aa16.27■□□□□ 0.2
CHMP3-207ENST00000485465 OR12D1P0DN82 309 aa16.27■□□□□ 0.2
CHMP3-207ENST00000485465 ITGA3P26006 1051 aa16.27■□□□□ 0.2
CHMP3-207ENST00000485465 GABRA3P34903 492 aa16.27■□□□□ 0.2
CHMP3-207ENST00000485465 RASSF2P50749 326 aa16.27■□□□□ 0.2
CHMP3-207ENST00000485465 SOX8P57073 446 aa16.27■□□□□ 0.2
CHMP3-207ENST00000485465 TMPRSS3P57727 454 aa16.27■□□□□ 0.2
CHMP3-207ENST00000485465 CORO7P57737 925 aa16.27■□□□□ 0.2
CHMP3-207ENST00000485465 DUSP5Q16690 384 aa16.27■□□□□ 0.2
CHMP3-207ENST00000485465 TCTN3Q6NUS6 607 aa16.27■□□□□ 0.2
CHMP3-207ENST00000485465 H3F3CQ6NXT2 135 aa16.27■□□□□ 0.2
CHMP3-207ENST00000485465 SLC44A2Q8IWA5 706 aaPredicted RBP16.27■□□□□ 0.2
CHMP3-207ENST00000485465 C10orf111Q8N326 155 aa16.27■□□□□ 0.2
CHMP3-207ENST00000485465 GPR151Q8TDV0 419 aa16.27■□□□□ 0.2
CHMP3-207ENST00000485465 BTBD10Q9BSF8 475 aa16.27■□□□□ 0.2
CHMP3-207ENST00000485465 LHPPQ9H008 270 aa16.27■□□□□ 0.2
CHMP3-207ENST00000485465 NXF5Q9H1B4 397 aaKnown RBP16.27■□□□□ 0.2
CHMP3-207ENST00000485465 LIN28AQ9H9Z2 209 aaKnown RBP16.27■□□□□ 0.2
CHMP3-207ENST00000485465 CPNE5Q9HCH3 593 aa16.27■□□□□ 0.2
CHMP3-207ENST00000485465 SPAG4Q9NPE6 437 aa16.27■□□□□ 0.2
CHMP3-207ENST00000485465 DUSP22Q9NRW4 184 aa16.27■□□□□ 0.2
CHMP3-207ENST00000485465 TMEM181Q9P2C4 612 aa16.27■□□□□ 0.2
CHMP3-207ENST00000485465 ABCD2Q9UBJ2 740 aa16.27■□□□□ 0.2
CHMP3-207ENST00000485465 KCNE3Q9Y6H6 103 aa16.27■□□□□ 0.2
CHMP3-207ENST00000485465 FRYQ5TBA9 3013 aa16.27■□□□□ 0.2
CHMP3-207ENST00000485465 HMGN4O00479 90 aa16.26■□□□□ 0.19
CHMP3-207ENST00000485465 NME4O00746 187 aa16.26■□□□□ 0.19
CHMP3-207ENST00000485465 GYG2O15488 501 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms