RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 RPAP3Q9H6T3 665 aaPredicted RBP3.1□□□□□ -1.91
SMC4-215ENST00000484799 ASB8Q9H765 288 aa3.1□□□□□ -1.91
SMC4-215ENST00000484799 GDF3Q9NR23 364 aa3.1□□□□□ -1.91
SMC4-215ENST00000484799 TECRQ9NZ01 308 aaKnown RBP3.1□□□□□ -1.91
SMC4-215ENST00000484799 EXTL2Q9UBQ6 330 aa3.1□□□□□ -1.91
SMC4-215ENST00000484799 DUSP12Q9UNI6 340 aa3.1□□□□□ -1.91
SMC4-215ENST00000484799 DIMT1Q9UNQ2 313 aaKnown RBP3.1□□□□□ -1.91
SMC4-215ENST00000484799 CHMP2BQ9UQN3 213 aa3.1□□□□□ -1.91
SMC4-215ENST00000484799 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.1□□□□□ -1.91
SMC4-215ENST00000484799 NPC1L1Q9UHC9 1359 aa3.1□□□□□ -1.91
SMC4-215ENST00000484799 PTPRUQ92729 1446 aa3.1□□□□□ -1.91
SMC4-215ENST00000484799 CUX2O14529 1486 aa3.09□□□□□ -1.91
SMC4-215ENST00000484799 ATAD2BQ9ULI0 1458 aa3.09□□□□□ -1.91
SMC4-215ENST00000484799 CROCCQ5TZA2 2017 aa3.09□□□□□ -1.91
SMC4-215ENST00000484799 E9PMD0 336 aa3.09□□□□□ -1.91
SMC4-215ENST00000484799 SGK494L7N484 410 aa3.09□□□□□ -1.91
SMC4-215ENST00000484799 LGALS8O00214 317 aa3.09□□□□□ -1.91
SMC4-215ENST00000484799 VPS26AO75436 327 aa3.09□□□□□ -1.91
SMC4-215ENST00000484799 TOM1L1O75674 476 aa3.09□□□□□ -1.91
SMC4-215ENST00000484799 ANGPTL1O95841 491 aa3.09□□□□□ -1.91
SMC4-215ENST00000484799 LYNP07948 512 aa3.09□□□□□ -1.91
SMC4-215ENST00000484799 TSPY4P0CV99 314 aa3.09□□□□□ -1.91
SMC4-215ENST00000484799 TSPY10P0CW01 314 aa3.09□□□□□ -1.91
SMC4-215ENST00000484799 CALCBP10092 127 aa3.09□□□□□ -1.91
SMC4-215ENST00000484799 EDNRAP25101 427 aa3.09□□□□□ -1.91
SMC4-215ENST00000484799 DPP4P27487 766 aa3.09□□□□□ -1.91
SMC4-215ENST00000484799 PRDX6P30041 224 aa3.09□□□□□ -1.91
SMC4-215ENST00000484799 CRYBA2P53672 197 aa3.09□□□□□ -1.91
SMC4-215ENST00000484799 BACE1P56817 501 aa3.09□□□□□ -1.91
SMC4-215ENST00000484799 NLRP11P59045 1033 aaKnown RBP3.09□□□□□ -1.91
SMC4-215ENST00000484799 BTG3Q14201 252 aaPredicted RBP3.09□□□□□ -1.91
SMC4-215ENST00000484799 HAGHQ16775 308 aa3.09□□□□□ -1.91
SMC4-215ENST00000484799 KNOP1Q1ED39 458 aaKnown RBP3.09□□□□□ -1.91
SMC4-215ENST00000484799 WSCD2Q2TBF2 565 aa3.09□□□□□ -1.91
SMC4-215ENST00000484799 MUC21Q5SSG8 566 aa3.09□□□□□ -1.91
SMC4-215ENST00000484799 GOLGA7Q7Z5G4 137 aa3.09□□□□□ -1.91
SMC4-215ENST00000484799 ADGRD2Q7Z7M1 963 aa3.09□□□□□ -1.91
SMC4-215ENST00000484799 AMZ2Q86W34 360 aa3.09□□□□□ -1.91
SMC4-215ENST00000484799 ZNF573Q86YE8 665 aa3.09□□□□□ -1.91
SMC4-215ENST00000484799 MLKLQ8NB16 471 aa3.09□□□□□ -1.91
SMC4-215ENST00000484799 OR6F1Q8NGZ6 308 aa3.09□□□□□ -1.91
SMC4-215ENST00000484799 GPR148Q8TDV2 347 aa3.09□□□□□ -1.91
SMC4-215ENST00000484799 ITLN1Q8WWA0 313 aa3.09□□□□□ -1.91
SMC4-215ENST00000484799 THRSPQ92748 146 aa3.09□□□□□ -1.91
SMC4-215ENST00000484799 P3H4Q92791 437 aa3.09□□□□□ -1.91
SMC4-215ENST00000484799 CARD6Q9BX69 1037 aa3.09□□□□□ -1.91
SMC4-215ENST00000484799 PDFQ9HBH1 243 aa3.09□□□□□ -1.91
SMC4-215ENST00000484799 FARSBQ9NSD9 589 aaKnown RBP3.09□□□□□ -1.91
SMC4-215ENST00000484799 CENPMQ9NSP4 180 aa3.09□□□□□ -1.91
SMC4-215ENST00000484799 CLEC5AQ9NY25 188 aa3.09□□□□□ -1.91
SMC4-215ENST00000484799 AATFQ9NY61 560 aaKnown RBP eCLIP3.09□□□□□ -1.91
SMC4-215ENST00000484799 TMOD2Q9NZR1 351 aa3.09□□□□□ -1.91
SMC4-215ENST00000484799 CGNQ9P2M7 1197 aaKnown RBP3.09□□□□□ -1.91
SMC4-215ENST00000484799 LHX3Q9UBR4 397 aa3.09□□□□□ -1.91
SMC4-215ENST00000484799 ZMYM6O95789 1325 aa3.09□□□□□ -1.91
SMC4-215ENST00000484799 POGZQ7Z3K3 1410 aa3.09□□□□□ -1.92
SMC4-215ENST00000484799 SYNJ2BP-COX16A0A087WUM0 186 aa3.08□□□□□ -1.92
SMC4-215ENST00000484799 ANKRD30BLA7E2S9 258 aa3.08□□□□□ -1.92
SMC4-215ENST00000484799 SRRM4A7MD48 611 aaKnown RBP3.08□□□□□ -1.92
SMC4-215ENST00000484799 MEI4A8MW99 385 aa3.08□□□□□ -1.92
SMC4-215ENST00000484799 E2F3O00716 465 aa3.08□□□□□ -1.92
SMC4-215ENST00000484799 MAPK13O15264 365 aa3.08□□□□□ -1.92
SMC4-215ENST00000484799 SIGLEC5O15389 551 aa3.08□□□□□ -1.92
SMC4-215ENST00000484799 TSPAN2O60636 221 aa3.08□□□□□ -1.92
SMC4-215ENST00000484799 NDUFA7O95182 113 aa3.08□□□□□ -1.92
SMC4-215ENST00000484799 FCER2P06734 321 aa3.08□□□□□ -1.92
SMC4-215ENST00000484799 GSTA1P08263 222 aa3.08□□□□□ -1.92
SMC4-215ENST00000484799 HTR2AP28223 471 aa3.08□□□□□ -1.92
SMC4-215ENST00000484799 PPP2R1AP30153 589 aa3.08□□□□□ -1.92
SMC4-215ENST00000484799 AXLP30530 894 aa3.08□□□□□ -1.92
SMC4-215ENST00000484799 PRDX2P32119 198 aa3.08□□□□□ -1.92
SMC4-215ENST00000484799 SOX6P35712 828 aa3.08□□□□□ -1.92
SMC4-215ENST00000484799 BRCC3P46736 316 aa3.08□□□□□ -1.92
SMC4-215ENST00000484799 TRPC1P48995 793 aa3.08□□□□□ -1.92
SMC4-215ENST00000484799 NDST1P52848 882 aa3.08□□□□□ -1.92
SMC4-215ENST00000484799 KRTAP10-8P60410 259 aa3.08□□□□□ -1.92
SMC4-215ENST00000484799 HERVK_113P63132 956 aa3.08□□□□□ -1.92
SMC4-215ENST00000484799 ERVK-8P63133 956 aa3.08□□□□□ -1.92
SMC4-215ENST00000484799 TPD52L1Q16890 204 aaPredicted RBP3.08□□□□□ -1.92
SMC4-215ENST00000484799 ZSWIM7Q19AV6 140 aa3.08□□□□□ -1.92
SMC4-215ENST00000484799 TMEM41BQ5BJD5 291 aa3.08□□□□□ -1.92
SMC4-215ENST00000484799 LDLRAP1Q5SW96 308 aa3.08□□□□□ -1.92
SMC4-215ENST00000484799 LIPJQ5W064 366 aa3.08□□□□□ -1.92
SMC4-215ENST00000484799 SLC25A24Q6NUK1 477 aa3.08□□□□□ -1.92
SMC4-215ENST00000484799 Q6ZVH6 145 aa3.08□□□□□ -1.92
SMC4-215ENST00000484799 RANBP3LQ86VV4 465 aaPredicted RBP3.08□□□□□ -1.92
SMC4-215ENST00000484799 CENPLQ8N0S6 344 aaPredicted RBP3.08□□□□□ -1.92
SMC4-215ENST00000484799 OR10T2Q8NGX3 314 aa3.08□□□□□ -1.92
SMC4-215ENST00000484799 SELENOMQ8WWX9 145 aa3.08□□□□□ -1.92
SMC4-215ENST00000484799 PNPLA2Q96AD5 504 aa3.08□□□□□ -1.92
SMC4-215ENST00000484799 PHYHIPLQ96FC7 376 aa3.08□□□□□ -1.92
SMC4-215ENST00000484799 ALKBH3Q96Q83 286 aaPredicted RBP3.08□□□□□ -1.92
SMC4-215ENST00000484799 TNFRSF13CQ96RJ3 184 aa3.08□□□□□ -1.92
SMC4-215ENST00000484799 TXN2Q99757 166 aa3.08□□□□□ -1.92
SMC4-215ENST00000484799 CRACR2AQ9BSW2 395 aa3.08□□□□□ -1.92
SMC4-215ENST00000484799 ZNF416Q9BWM5 594 aa3.08□□□□□ -1.92
SMC4-215ENST00000484799 ERVK-6Q9BXR3 956 aa3.08□□□□□ -1.92
SMC4-215ENST00000484799 NMUR1Q9HB89 426 aa3.08□□□□□ -1.92
SMC4-215ENST00000484799 DEPPQ9NTK1 212 aa3.08□□□□□ -1.92
SMC4-215ENST00000484799 TUBGCP4Q9UGJ1 667 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms