RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 UGT3A2Q3SY77 523 aa11.26□□□□□ -0.61
MSH5-216ENST00000484309 RFTN2Q52LD8 501 aaPredicted RBP11.26□□□□□ -0.61
MSH5-216ENST00000484309 ZNF385BQ569K4 471 aa11.26□□□□□ -0.61
MSH5-216ENST00000484309 EMC4Q5J8M3 183 aa11.26□□□□□ -0.61
MSH5-216ENST00000484309 TMEM198Q66K66 360 aa11.26□□□□□ -0.61
MSH5-216ENST00000484309 NPSR1Q6W5P4 371 aa11.26□□□□□ -0.61
MSH5-216ENST00000484309 RPTNQ6XPR3 784 aa11.26□□□□□ -0.61
MSH5-216ENST00000484309 TRILQ7L0X0 811 aa11.26□□□□□ -0.61
MSH5-216ENST00000484309 WDR53Q7Z5U6 358 aaPredicted RBP11.26□□□□□ -0.61
MSH5-216ENST00000484309 NUDCD3Q8IVD9 361 aa11.26□□□□□ -0.61
MSH5-216ENST00000484309 SAMD14Q8IZD0 417 aaPredicted RBP11.26□□□□□ -0.61
MSH5-216ENST00000484309 CLYBLQ8N0X4 340 aa11.26□□□□□ -0.61
MSH5-216ENST00000484309 SLC34A3Q8N130 599 aa11.26□□□□□ -0.61
MSH5-216ENST00000484309 MARVELD2Q8N4S9 558 aa11.26□□□□□ -0.61
MSH5-216ENST00000484309 C17orf47Q8NEP4 570 aa11.26□□□□□ -0.61
MSH5-216ENST00000484309 PPP1R14CQ8TAE6 165 aa11.26□□□□□ -0.61
MSH5-216ENST00000484309 HGDQ93099 445 aa11.26□□□□□ -0.61
MSH5-216ENST00000484309 TMBIM1Q969X1 311 aa11.26□□□□□ -0.61
MSH5-216ENST00000484309 CIDECQ96AQ7 238 aaPredicted RBP11.26□□□□□ -0.61
MSH5-216ENST00000484309 HSPBAP1Q96EW2 488 aa11.26□□□□□ -0.61
MSH5-216ENST00000484309 DMRTA2Q96SC8 542 aa11.26□□□□□ -0.61
MSH5-216ENST00000484309 C1orf50Q9BV19 199 aa11.26□□□□□ -0.61
MSH5-216ENST00000484309 GLIPR2Q9H4G4 154 aa11.26□□□□□ -0.61
MSH5-216ENST00000484309 METTL7AQ9H8H3 244 aa11.26□□□□□ -0.61
MSH5-216ENST00000484309 ZNF395Q9H8N7 513 aaPredicted RBP11.26□□□□□ -0.61
MSH5-216ENST00000484309 SPRR3Q9UBC9 169 aa11.26□□□□□ -0.61
MSH5-216ENST00000484309 ZDHHC2Q9UIJ5 367 aa11.26□□□□□ -0.61
MSH5-216ENST00000484309 INTS1Q8N201 2190 aaKnown RBP11.26□□□□□ -0.61
MSH5-216ENST00000484309 TRGV5A0A0B4J1U4 118 aa11.25□□□□□ -0.61
MSH5-216ENST00000484309 FRG2CA6NGY1 282 aa11.25□□□□□ -0.61
MSH5-216ENST00000484309 E9PLN8 166 aa11.25□□□□□ -0.61
MSH5-216ENST00000484309 PDPK1O15530 556 aa11.25□□□□□ -0.61
MSH5-216ENST00000484309 ITM2AO43736 263 aa11.25□□□□□ -0.61
MSH5-216ENST00000484309 UGT2B11O75310 529 aa11.25□□□□□ -0.61
MSH5-216ENST00000484309 TRIM3O75382 744 aaPredicted RBP11.25□□□□□ -0.61
MSH5-216ENST00000484309 ERN1O75460 977 aaKnown RBP11.25□□□□□ -0.61
MSH5-216ENST00000484309 REM1O75628 298 aa11.25□□□□□ -0.61
MSH5-216ENST00000484309 BCAS2O75934 225 aaPredicted RBP11.25□□□□□ -0.61
MSH5-216ENST00000484309 IGHG3P01860 377 aa11.25□□□□□ -0.61
MSH5-216ENST00000484309 FGF4P08620 206 aa11.25□□□□□ -0.61
MSH5-216ENST00000484309 EFNA1P20827 205 aaPredicted RBP11.25□□□□□ -0.61
MSH5-216ENST00000484309 ENDOUP21128 410 aaKnown RBP11.25□□□□□ -0.61
MSH5-216ENST00000484309 DRD5P21918 477 aa11.25□□□□□ -0.61
MSH5-216ENST00000484309 CASP3P42574 277 aa11.25□□□□□ -0.61
MSH5-216ENST00000484309 SMSP52788 366 aa11.25□□□□□ -0.61
MSH5-216ENST00000484309 HSPB3Q12988 150 aa11.25□□□□□ -0.61
MSH5-216ENST00000484309 CHI3L2Q15782 390 aa11.25□□□□□ -0.61
MSH5-216ENST00000484309 GXYLT1Q4G148 440 aa11.25□□□□□ -0.61
MSH5-216ENST00000484309 FNDC7Q5VTL7 733 aa11.25□□□□□ -0.61
MSH5-216ENST00000484309 CRYBG3Q68DQ2 2970 aa11.25□□□□□ -0.61
MSH5-216ENST00000484309 ZNF585AQ6P3V2 769 aa11.25□□□□□ -0.61
MSH5-216ENST00000484309 IKBIPQ70UQ0 350 aa11.25□□□□□ -0.61
MSH5-216ENST00000484309 ZNF551Q7Z340 670 aaPredicted RBP11.25□□□□□ -0.61
MSH5-216ENST00000484309 OR4N2Q8NGD1 307 aa11.25□□□□□ -0.61
MSH5-216ENST00000484309 FCRL1Q96LA6 429 aa11.25□□□□□ -0.61
MSH5-216ENST00000484309 C3orf30Q96M34 536 aa11.25□□□□□ -0.61
MSH5-216ENST00000484309 VSTM2LQ96N03 204 aa11.25□□□□□ -0.61
MSH5-216ENST00000484309 AMDHD1Q96NU7 426 aa11.25□□□□□ -0.61
MSH5-216ENST00000484309 CCT7Q99832 543 aa11.25□□□□□ -0.61
MSH5-216ENST00000484309 VKORC1Q9BQB6 163 aa11.25□□□□□ -0.61
MSH5-216ENST00000484309 ANGPTL4Q9BY76 406 aa11.25□□□□□ -0.61
MSH5-216ENST00000484309 TP63Q9H3D4 680 aaPredicted RBP11.25□□□□□ -0.61
MSH5-216ENST00000484309 GALNT9Q9HCQ5 603 aa11.25□□□□□ -0.61
MSH5-216ENST00000484309 KCNK9Q9NPC2 374 aa11.25□□□□□ -0.61
MSH5-216ENST00000484309 KLRF1Q9NZS2 232 aa11.25□□□□□ -0.61
MSH5-216ENST00000484309 B4GALT7Q9UBV7 327 aa11.25□□□□□ -0.61
MSH5-216ENST00000484309 GPR55Q9Y2T6 319 aaPredicted RBP11.25□□□□□ -0.61
MSH5-216ENST00000484309 NPIPB8E9PQR5 432 aa11.24□□□□□ -0.61
MSH5-216ENST00000484309 AQP7O14520 342 aa11.24□□□□□ -0.61
MSH5-216ENST00000484309 ACOX3O15254 700 aa11.24□□□□□ -0.61
MSH5-216ENST00000484309 PLOD3O60568 738 aa11.24□□□□□ -0.61
MSH5-216ENST00000484309 PEX11AO75192 247 aa11.24□□□□□ -0.61
MSH5-216ENST00000484309 TRAPPC6AO75865 159 aa11.24□□□□□ -0.61
MSH5-216ENST00000484309 HSPA4LO95757 839 aa11.24□□□□□ -0.61
MSH5-216ENST00000484309 SNRPB2P08579 225 aaKnown RBP11.24□□□□□ -0.61
MSH5-216ENST00000484309 CT45A8P0DMV1 189 aa11.24□□□□□ -0.61
MSH5-216ENST00000484309 CT45A9P0DMV2 189 aa11.24□□□□□ -0.61
MSH5-216ENST00000484309 HTR1EP28566 365 aa11.24□□□□□ -0.61
MSH5-216ENST00000484309 PTGDSP41222 190 aa11.24□□□□□ -0.61
MSH5-216ENST00000484309 DCAF7P61962 342 aa11.24□□□□□ -0.61
MSH5-216ENST00000484309 RPP38P78345 283 aaKnown RBP11.24□□□□□ -0.61
MSH5-216ENST00000484309 MPP2Q14168 576 aa11.24□□□□□ -0.61
MSH5-216ENST00000484309 TOMM20Q15388 145 aa11.24□□□□□ -0.61
MSH5-216ENST00000484309 CT45A2Q5DJT8 189 aa11.24□□□□□ -0.61
MSH5-216ENST00000484309 XKR7Q5GH72 579 aa11.24□□□□□ -0.61
MSH5-216ENST00000484309 TBCELQ5QJ74 424 aa11.24□□□□□ -0.61
MSH5-216ENST00000484309 SP5Q6BEB4 398 aaPredicted RBP11.24□□□□□ -0.61
MSH5-216ENST00000484309 ANGPTL8Q6UXH0 198 aa11.24□□□□□ -0.61
MSH5-216ENST00000484309 RNF165Q6ZSG1 346 aa11.24□□□□□ -0.61
MSH5-216ENST00000484309 NUP54Q7Z3B4 507 aa11.24□□□□□ -0.61
MSH5-216ENST00000484309 PACS2Q86VP3 889 aa11.24□□□□□ -0.61
MSH5-216ENST00000484309 SLC44A2Q8IWA5 706 aaPredicted RBP11.24□□□□□ -0.61
MSH5-216ENST00000484309 LIX1Q8N485 282 aa11.24□□□□□ -0.61
MSH5-216ENST00000484309 OR6Y1Q8NGX8 325 aa11.24□□□□□ -0.61
MSH5-216ENST00000484309 PHF10Q8WUB8 498 aaKnown RBP11.24□□□□□ -0.61
MSH5-216ENST00000484309 NUDT8Q8WV74 236 aa11.24□□□□□ -0.61
MSH5-216ENST00000484309 EFHD2Q96C19 240 aaPredicted RBP11.24□□□□□ -0.61
MSH5-216ENST00000484309 SDCCAG3Q96C92 435 aa11.24□□□□□ -0.61
MSH5-216ENST00000484309 PPCDCQ96CD2 204 aa11.24□□□□□ -0.61
MSH5-216ENST00000484309 METTL2AQ96IZ6 378 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms