RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 LEF1Q9UJU2 399 aaPredicted RBP2.31□□□□□ -2.04
SCAF11-207ENST00000484275 CDH7Q9ULB5 785 aa2.31□□□□□ -2.04
SCAF11-207ENST00000484275 DIMT1Q9UNQ2 313 aaKnown RBP2.31□□□□□ -2.04
SCAF11-207ENST00000484275 EXOC7Q9UPT5 735 aa2.31□□□□□ -2.04
SCAF11-207ENST00000484275 KIR2DL5BA0A0G2JN68 375 aa2.3□□□□□ -2.04
SCAF11-207ENST00000484275 KIR2DL5BA0A0G2JPC4 375 aa2.3□□□□□ -2.04
SCAF11-207ENST00000484275 WDR46O15213 610 aaKnown RBP2.3□□□□□ -2.04
SCAF11-207ENST00000484275 MMP23AO75900 390 aa2.3□□□□□ -2.04
SCAF11-207ENST00000484275 TOXO94900 526 aa2.3□□□□□ -2.04
SCAF11-207ENST00000484275 POU3F4P49335 361 aa2.3□□□□□ -2.04
SCAF11-207ENST00000484275 RPS4XP62701 263 aaKnown RBP2.3□□□□□ -2.04
SCAF11-207ENST00000484275 ZNF45Q02386 682 aa2.3□□□□□ -2.04
SCAF11-207ENST00000484275 EIF4EBP1Q13541 118 aaPredicted RBP2.3□□□□□ -2.04
SCAF11-207ENST00000484275 ZNF630Q2M218 657 aaPredicted RBP2.3□□□□□ -2.04
SCAF11-207ENST00000484275 TCHHL1Q5QJ38 904 aaPredicted RBP2.3□□□□□ -2.04
SCAF11-207ENST00000484275 DDI2Q5TDH0 399 aa2.3□□□□□ -2.04
SCAF11-207ENST00000484275 GBP6Q6ZN66 633 aa2.3□□□□□ -2.04
SCAF11-207ENST00000484275 PIWIL3Q7Z3Z3 882 aaKnown RBP2.3□□□□□ -2.04
SCAF11-207ENST00000484275 HOOK3Q86VS8 718 aa2.3□□□□□ -2.04
SCAF11-207ENST00000484275 C9orf40Q8IXQ3 194 aa2.3□□□□□ -2.04
SCAF11-207ENST00000484275 KIR2DL5AQ8N109 375 aa2.3□□□□□ -2.04
SCAF11-207ENST00000484275 OR7G3Q8NG95 312 aa2.3□□□□□ -2.04
SCAF11-207ENST00000484275 CITED2Q99967 270 aaPredicted RBP2.3□□□□□ -2.04
SCAF11-207ENST00000484275 TM2D1Q9BX74 207 aa2.3□□□□□ -2.04
SCAF11-207ENST00000484275 SLC26A1Q9H2B4 701 aa2.3□□□□□ -2.04
SCAF11-207ENST00000484275 ZNF282Q9UDV7 671 aaPredicted RBP2.3□□□□□ -2.04
SCAF11-207ENST00000484275 A0A1B0GUA9 196 aa2.29□□□□□ -2.04
SCAF11-207ENST00000484275 YJEFN3A6XGL0 299 aa2.29□□□□□ -2.04
SCAF11-207ENST00000484275 CYP11B1P15538 503 aa2.29□□□□□ -2.04
SCAF11-207ENST00000484275 KCNK10P57789 538 aa2.29□□□□□ -2.04
SCAF11-207ENST00000484275 PFN3P60673 137 aa2.29□□□□□ -2.04
SCAF11-207ENST00000484275 NFE2L1Q14494 772 aa2.29□□□□□ -2.04
SCAF11-207ENST00000484275 CYB5R2Q6BCY4 276 aa2.29□□□□□ -2.04
SCAF11-207ENST00000484275 UFSP1Q6NVU6 142 aa2.29□□□□□ -2.04
SCAF11-207ENST00000484275 MSANTD1Q6ZTZ1 278 aa2.29□□□□□ -2.04
SCAF11-207ENST00000484275 ERICH1Q86X53 443 aa2.29□□□□□ -2.04
SCAF11-207ENST00000484275 VSIG1Q86XK7 387 aa2.29□□□□□ -2.04
SCAF11-207ENST00000484275 TMEM126BQ8IUX1 230 aa2.29□□□□□ -2.04
SCAF11-207ENST00000484275 SIAH3Q8IW03 269 aa2.29□□□□□ -2.04
SCAF11-207ENST00000484275 CCDC71LQ8N9Z2 235 aa2.29□□□□□ -2.04
SCAF11-207ENST00000484275 DCAF4L2Q8NA75 395 aa2.29□□□□□ -2.04
SCAF11-207ENST00000484275 UTP14AQ9BVJ6 771 aaKnown RBP2.29□□□□□ -2.04
SCAF11-207ENST00000484275 DDX28Q9NUL7 540 aaKnown RBP2.29□□□□□ -2.04
SCAF11-207ENST00000484275 DNAJC17Q9NVM6 304 aaKnown RBP2.29□□□□□ -2.04
SCAF11-207ENST00000484275 KCNK6Q9Y257 313 aa2.29□□□□□ -2.04
SCAF11-207ENST00000484275 WSB1Q9Y6I7 421 aa2.29□□□□□ -2.04
SCAF11-207ENST00000484275 A4D1N5 150 aa2.28□□□□□ -2.04
SCAF11-207ENST00000484275 SH2D1BO14796 132 aa2.28□□□□□ -2.04
SCAF11-207ENST00000484275 REC8O95072 547 aa2.28□□□□□ -2.04
SCAF11-207ENST00000484275 CD5P06127 495 aa2.28□□□□□ -2.04
SCAF11-207ENST00000484275 CPA3P15088 417 aa2.28□□□□□ -2.04
SCAF11-207ENST00000484275 GPNMBQ14956 572 aa2.28□□□□□ -2.04
SCAF11-207ENST00000484275 STX1AQ16623 288 aa2.28□□□□□ -2.04
SCAF11-207ENST00000484275 ARIH2OSQ8N7S6 290 aa2.28□□□□□ -2.04
SCAF11-207ENST00000484275 MARCH1Q8TCQ1 289 aa2.28□□□□□ -2.04
SCAF11-207ENST00000484275 GLYATL1Q969I3 302 aa2.28□□□□□ -2.04
SCAF11-207ENST00000484275 SLC35E1Q96K37 410 aa2.28□□□□□ -2.04
SCAF11-207ENST00000484275 CPXM1Q96SM3 734 aa2.28□□□□□ -2.04
SCAF11-207ENST00000484275 FUNDC2Q9BWH2 189 aa2.28□□□□□ -2.04
SCAF11-207ENST00000484275 TSPY26PQ9H489 355 aa2.28□□□□□ -2.04
SCAF11-207ENST00000484275 ZCCHC17Q9NP64 241 aaKnown RBP2.28□□□□□ -2.04
SCAF11-207ENST00000484275 TEKT2Q9UIF3 430 aa2.28□□□□□ -2.04
SCAF11-207ENST00000484275 PSG11Q9UQ72 335 aa2.28□□□□□ -2.04
SCAF11-207ENST00000484275 ARHGAP21Q5T5U3 1957 aa2.28□□□□□ -2.04
SCAF11-207ENST00000484275 RANBP6O60518 1105 aaKnown RBP2.27□□□□□ -2.05
SCAF11-207ENST00000484275 TBCAO75347 108 aaKnown RBP2.27□□□□□ -2.05
SCAF11-207ENST00000484275 PGK1P00558 417 aa2.27□□□□□ -2.05
SCAF11-207ENST00000484275 TIMP1P01033 207 aa2.27□□□□□ -2.05
SCAF11-207ENST00000484275 HOXB7P09629 217 aa2.27□□□□□ -2.05
SCAF11-207ENST00000484275 SCG2P13521 617 aa2.27□□□□□ -2.05
SCAF11-207ENST00000484275 ST8SIA6P61647 398 aa2.27□□□□□ -2.05
SCAF11-207ENST00000484275 RBP5P82980 135 aa2.27□□□□□ -2.05
SCAF11-207ENST00000484275 RPS6KA1Q15418 735 aa2.27□□□□□ -2.05
SCAF11-207ENST00000484275 TRADDQ15628 312 aa2.27□□□□□ -2.05
SCAF11-207ENST00000484275 ANKRD20A4Q4UJ75 823 aa2.27□□□□□ -2.05
SCAF11-207ENST00000484275 MPPE1Q53F39 396 aa2.27□□□□□ -2.05
SCAF11-207ENST00000484275 ANKRD20A8PQ5CZ79 823 aa2.27□□□□□ -2.05
SCAF11-207ENST00000484275 ANKRD20A2Q5SQ80 823 aa2.27□□□□□ -2.05
SCAF11-207ENST00000484275 ANKRD20A1Q5TYW2 823 aa2.27□□□□□ -2.05
SCAF11-207ENST00000484275 ANKRD20A3Q5VUR7 823 aa2.27□□□□□ -2.05
SCAF11-207ENST00000484275 RTL6Q6ICC9 239 aa2.27□□□□□ -2.05
SCAF11-207ENST00000484275 MCOLN2Q8IZK6 566 aa2.27□□□□□ -2.05
SCAF11-207ENST00000484275 OR6M1Q8NGM8 313 aa2.27□□□□□ -2.05
SCAF11-207ENST00000484275 TEKT1Q969V4 418 aa2.27□□□□□ -2.05
SCAF11-207ENST00000484275 ZMAT2Q96NC0 199 aaKnown RBP2.27□□□□□ -2.05
SCAF11-207ENST00000484275 IL4I1Q96RQ9 567 aa2.27□□□□□ -2.05
SCAF11-207ENST00000484275 DDX50Q9BQ39 737 aaKnown RBP2.27□□□□□ -2.05
SCAF11-207ENST00000484275 ZNF350Q9GZX5 532 aa2.27□□□□□ -2.05
SCAF11-207ENST00000484275 GLT8D2Q9H1C3 349 aa2.27□□□□□ -2.05
SCAF11-207ENST00000484275 GLIPR2Q9H4G4 154 aa2.27□□□□□ -2.05
SCAF11-207ENST00000484275 ALG9Q9H6U8 611 aa2.27□□□□□ -2.05
SCAF11-207ENST00000484275 ZNF223Q9UK11 482 aaPredicted RBP2.27□□□□□ -2.05
SCAF11-207ENST00000484275 ASTN1O14525 1302 aa2.26□□□□□ -2.05
SCAF11-207ENST00000484275 USP27XA6NNY8 438 aa2.26□□□□□ -2.05
SCAF11-207ENST00000484275 GMNNO75496 209 aa2.26□□□□□ -2.05
SCAF11-207ENST00000484275 CRCPO75575 148 aa2.26□□□□□ -2.05
SCAF11-207ENST00000484275 GAS8O95995 478 aa2.26□□□□□ -2.05
SCAF11-207ENST00000484275 PTBP1P26599 531 aaKnown RBP eCLIP2.26□□□□□ -2.05
SCAF11-207ENST00000484275 HTR1FP30939 366 aa2.26□□□□□ -2.05
SCAF11-207ENST00000484275 MAT2AP31153 395 aaKnown RBP2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms