RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 E2F6O75461 281 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 RASAL1O95294 804 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 TBX6O95947 436 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-216ENST00000484087 B3GALT4O96024 378 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 CST1P01037 141 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 ZNF26P17031 533 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-216ENST00000484087 ATP5A1P25705 553 aaKnown RBP6.49□□□□□ -1.37
BRCA1-216ENST00000484087 TLX1P31314 330 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-216ENST00000484087 KDELR2P33947 212 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 PCGF2P35227 344 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 BUD31P41223 144 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-216ENST00000484087 EFNA3P52797 238 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 TAGLNQ01995 201 aaKnown RBP6.49□□□□□ -1.37
BRCA1-216ENST00000484087 RELAQ04206 551 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 EPS8Q12929 822 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 ATP1A4Q13733 1029 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 BLMHQ13867 455 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 MYBPC3Q14896 1274 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 MLC1Q15049 377 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 NCF4Q15080 339 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 ZNF630Q2M218 657 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-216ENST00000484087 NDUFAF5Q5TEU4 345 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 KRT80Q6KB66 452 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 TMEM154Q6P9G4 183 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 BORAQ6PGQ7 559 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 ZNF517Q6ZMY9 492 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-216ENST00000484087 RNF44Q7L0R7 432 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 ABHD13Q7L211 337 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 PRICKLE2Q7Z3G6 844 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 ZDHHC13Q8IUH4 622 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 APLFQ8IW19 511 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-216ENST00000484087 GPR135Q8IZ08 494 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 SAMD14Q8IZD0 417 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-216ENST00000484087 ST13P4Q8IZP2 240 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-216ENST00000484087 CARFQ8N187 725 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 CLEC4FQ8N1N0 589 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 SVOPLQ8N434 492 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 MARVELD2Q8N4S9 558 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 CBR4Q8N4T8 237 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 ACOT4Q8N9L9 421 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 NT5CQ8TCD5 201 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 LZICQ8WZA0 190 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 MOAP1Q96BY2 351 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 C10orf90Q96M02 699 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 BBS4Q96RK4 519 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 ZFYVE21Q9BQ24 234 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 SOX17Q9H6I2 414 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-216ENST00000484087 SEMA3GQ9NS98 782 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 THUMPD1Q9NXG2 353 aaKnown RBP6.49□□□□□ -1.37
BRCA1-216ENST00000484087 TAS2R7Q9NYW3 318 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 LUZP4Q9P127 313 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 PHF11Q9UIL8 331 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 SERTAD3Q9UJW9 196 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 UTS2RQ9UKP6 389 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 TCFL5Q9UL49 500 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 OAZ3Q9UMX2 235 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 PLCL2Q9UPR0 1127 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 FARSAQ9Y285 508 aaKnown RBP6.49□□□□□ -1.37
BRCA1-216ENST00000484087 TP53TG5Q9Y2B4 290 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 ORC6Q9Y5N6 252 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 KCNMB2Q9Y691 235 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 ZNF780BQ9Y6R6 833 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 COL12A1Q99715 3063 aa6.49□□□□□ -1.37
BRCA1-216ENST00000484087 A0A0G2JN53 185 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 A6NL46 340 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 G3V2T6 193 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 H0YGG7 62 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 NDUFB5O43674 189 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 B3GALT2O43825 422 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 KLF7O75840 302 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-216ENST00000484087 PDE9AO76083 593 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 KLHL18O94889 574 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 MT-ND1P03886 318 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 FABP3P05413 133 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 KLK3P07288 261 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-216ENST00000484087 UMODP07911 640 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 LYNP07948 512 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 UBTFL6P0CB48 400 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-216ENST00000484087 MPIP34949 423 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 MAGEA8P43361 318 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 CHN2P52757 468 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 DSTNP60981 165 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 RAB8AP61006 207 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 ARF3P61204 181 aaPredicted RBP6.48□□□□□ -1.37
BRCA1-216ENST00000484087 RPS15P62841 145 aaKnown RBP6.48□□□□□ -1.37
BRCA1-216ENST00000484087 SKP1P63208 163 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 BTN3A2P78410 334 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 MAT1AQ00266 395 aaKnown RBP6.48□□□□□ -1.37
BRCA1-216ENST00000484087 CDK6Q00534 326 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 HSPB3Q12988 150 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 KCNAB2Q13303 367 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 GAB1Q13480 694 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 SCARB2Q14108 478 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 NKAIN1Q4KMZ8 207 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.48□□□□□ -1.37
BRCA1-216ENST00000484087 C6orf52Q5T4I8 152 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 RHBDD2Q6NTF9 364 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 FBXO42Q6P3S6 717 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 ENPP6Q6UWR7 440 aa6.48□□□□□ -1.37
BRCA1-216ENST00000484087 CBLL1Q75N03 491 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms