RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 DSPPQ9NZW4 1301 aa24.52■■□□□ 1.52
SHOX2-204ENST00000483851 CASC3O15234 703 aaKnown RBP24.52■■□□□ 1.52
SHOX2-204ENST00000483851 COQ9O75208 318 aa24.52■■□□□ 1.52
SHOX2-204ENST00000483851 CKMT1AP12532 417 aa24.52■■□□□ 1.52
SHOX2-204ENST00000483851 FOLR1P15328 257 aa24.52■■□□□ 1.52
SHOX2-204ENST00000483851 RAD23AP54725 363 aa24.52■■□□□ 1.52
SHOX2-204ENST00000483851 ZIK1Q3SY52 487 aaPredicted RBP24.52■■□□□ 1.52
SHOX2-204ENST00000483851 GPAT3Q53EU6 434 aa24.52■■□□□ 1.52
SHOX2-204ENST00000483851 PERM1Q5SV97 790 aa24.52■■□□□ 1.52
SHOX2-204ENST00000483851 C16orf62Q7Z3J2 963 aa24.52■■□□□ 1.52
SHOX2-204ENST00000483851 ZNF501Q96CX3 271 aaPredicted RBP24.52■■□□□ 1.52
SHOX2-204ENST00000483851 SLC35A4Q96G79 324 aa24.52■■□□□ 1.52
SHOX2-204ENST00000483851 ANKRA2Q9H9E1 313 aa24.52■■□□□ 1.52
SHOX2-204ENST00000483851 DUSP22Q9NRW4 184 aa24.52■■□□□ 1.52
SHOX2-204ENST00000483851 GMEB2Q9UKD1 530 aa24.52■■□□□ 1.52
SHOX2-204ENST00000483851 ORC6Q9Y5N6 252 aa24.52■■□□□ 1.52
SHOX2-204ENST00000483851 ADAMTS9Q9P2N4 1935 aa24.52■■□□□ 1.52
SHOX2-204ENST00000483851 PATE3B3GLJ2 98 aa24.51■■□□□ 1.51
SHOX2-204ENST00000483851 DIRAS1O95057 198 aa24.51■■□□□ 1.51
SHOX2-204ENST00000483851 SLC5A2P31639 672 aa24.51■■□□□ 1.51
SHOX2-204ENST00000483851 SERTAD2Q14140 314 aa24.51■■□□□ 1.51
SHOX2-204ENST00000483851 ARHGAP22Q7Z5H3 698 aa24.51■■□□□ 1.51
SHOX2-204ENST00000483851 HS3ST5Q8IZT8 346 aa24.51■■□□□ 1.51
SHOX2-204ENST00000483851 SLC16A11Q8NCK7 471 aa24.51■■□□□ 1.51
SHOX2-204ENST00000483851 GPR32P1Q8NGA4 272 aa24.51■■□□□ 1.51
SHOX2-204ENST00000483851 RBM18Q96H35 190 aaKnown RBP24.51■■□□□ 1.51
SHOX2-204ENST00000483851 PIP5K1AQ99755 562 aa24.51■■□□□ 1.51
SHOX2-204ENST00000483851 AMBRA1Q9C0C7 1298 aa24.51■■□□□ 1.51
SHOX2-204ENST00000483851 LRRN3Q9H3W5 708 aa24.51■■□□□ 1.51
SHOX2-204ENST00000483851 TOR3AQ9H497 397 aa24.51■■□□□ 1.51
SHOX2-204ENST00000483851 TRIM45Q9H8W5 580 aaPredicted RBP24.51■■□□□ 1.51
SHOX2-204ENST00000483851 CXorf21Q9HAI6 301 aa24.51■■□□□ 1.51
SHOX2-204ENST00000483851 FGF21Q9NSA1 209 aa24.51■■□□□ 1.51
SHOX2-204ENST00000483851 SATB2Q9UPW6 733 aa24.51■■□□□ 1.51
SHOX2-204ENST00000483851 MMACHCQ9Y4U1 282 aa24.51■■□□□ 1.51
SHOX2-204ENST00000483851 PRAMEF25A6NGN4 478 aa24.51■■□□□ 1.51
SHOX2-204ENST00000483851 AVPR2P30518 371 aa24.51■■□□□ 1.51
SHOX2-204ENST00000483851 RRM2P31350 389 aa24.51■■□□□ 1.51
SHOX2-204ENST00000483851 OR1E2P47887 323 aa24.51■■□□□ 1.51
SHOX2-204ENST00000483851 HMGA2P52926 109 aa24.51■■□□□ 1.51
SHOX2-204ENST00000483851 MAT1AQ00266 395 aaKnown RBP24.51■■□□□ 1.51
SHOX2-204ENST00000483851 ACY1Q03154 408 aa24.51■■□□□ 1.51
SHOX2-204ENST00000483851 ARHGAP11BQ3KRB8 267 aa24.51■■□□□ 1.51
SHOX2-204ENST00000483851 TTLL10Q6ZVT0 673 aa24.51■■□□□ 1.51
SHOX2-204ENST00000483851 GALNT12Q8IXK2 581 aa24.51■■□□□ 1.51
SHOX2-204ENST00000483851 VWA5B2Q8N398 1253 aa24.51■■□□□ 1.51
SHOX2-204ENST00000483851 HOXB13Q92826 284 aaPredicted RBP24.51■■□□□ 1.51
SHOX2-204ENST00000483851 SLC38A1Q9H2H9 487 aa24.51■■□□□ 1.51
SHOX2-204ENST00000483851 FAM118AQ9NWS6 357 aa24.51■■□□□ 1.51
SHOX2-204ENST00000483851 KCNE3Q9Y6H6 103 aa24.51■■□□□ 1.51
SHOX2-204ENST00000483851 SCN2AQ99250 2005 aa24.5■■□□□ 1.51
SHOX2-204ENST00000483851 A8MU76 341 aa24.5■■□□□ 1.51
SHOX2-204ENST00000483851 DSCR3O14972 297 aa24.5■■□□□ 1.51
SHOX2-204ENST00000483851 AK1P00568 194 aa24.5■■□□□ 1.51
SHOX2-204ENST00000483851 SPTBP11277 2137 aa24.5■■□□□ 1.51
SHOX2-204ENST00000483851 HPCAP84074 193 aa24.5■■□□□ 1.51
SHOX2-204ENST00000483851 PUM1Q14671 1186 aaKnown RBP eCLIP24.5■■□□□ 1.51
SHOX2-204ENST00000483851 ANGPT1Q15389 498 aa24.5■■□□□ 1.51
SHOX2-204ENST00000483851 PROX2Q3B8N5 592 aa24.5■■□□□ 1.51
SHOX2-204ENST00000483851 TTC23Q5W5X9 447 aa24.5■■□□□ 1.51
SHOX2-204ENST00000483851 ZNF574Q6ZN55 896 aaPredicted RBP24.5■■□□□ 1.51
SHOX2-204ENST00000483851 SHISA5Q8N114 240 aa24.5■■□□□ 1.51
SHOX2-204ENST00000483851 CHDHQ8NE62 594 aaPredicted RBP24.5■■□□□ 1.51
SHOX2-204ENST00000483851 PMM1Q92871 262 aa24.5■■□□□ 1.51
SHOX2-204ENST00000483851 PINK1Q9BXM7 581 aa24.5■■□□□ 1.51
SHOX2-204ENST00000483851 ALOXE3Q9BYJ1 711 aa24.5■■□□□ 1.51
SHOX2-204ENST00000483851 TMEM184BQ9Y519 407 aaPredicted RBP24.5■■□□□ 1.51
SHOX2-204ENST00000483851 PCDHGA5Q9Y5G8 931 aa24.5■■□□□ 1.51
SHOX2-204ENST00000483851 LYVE1Q9Y5Y7 322 aa24.5■■□□□ 1.51
SHOX2-204ENST00000483851 ADAMTS20P59510 1910 aa24.5■■□□□ 1.51
SHOX2-204ENST00000483851 A0A1W2PQM1 296 aa24.49■■□□□ 1.51
SHOX2-204ENST00000483851 CCDC160A6NGH7 325 aa24.49■■□□□ 1.51
SHOX2-204ENST00000483851 A8MVJ9 347 aa24.49■■□□□ 1.51
SHOX2-204ENST00000483851 RECKO95980 971 aa24.49■■□□□ 1.51
SHOX2-204ENST00000483851 RPLP0P05388 317 aaKnown RBP24.49■■□□□ 1.51
SHOX2-204ENST00000483851 ALOX5P09917 674 aa24.49■■□□□ 1.51
SHOX2-204ENST00000483851 ZNF883P0CG24 379 aa24.49■■□□□ 1.51
SHOX2-204ENST00000483851 MAP3K8P41279 467 aa24.49■■□□□ 1.51
SHOX2-204ENST00000483851 STT3AP46977 705 aa24.49■■□□□ 1.51
SHOX2-204ENST00000483851 HLCSP50747 726 aa24.49■■□□□ 1.51
SHOX2-204ENST00000483851 CCL7P80098 99 aa24.49■■□□□ 1.51
SHOX2-204ENST00000483851 DSG2Q14126 1118 aa24.49■■□□□ 1.51
SHOX2-204ENST00000483851 ZBED5Q49AG3 693 aa24.49■■□□□ 1.51
SHOX2-204ENST00000483851 ANKRD34AQ69YU3 496 aa24.49■■□□□ 1.51
SHOX2-204ENST00000483851 ZNF605Q86T29 641 aa24.49■■□□□ 1.51
SHOX2-204ENST00000483851 FKBP10Q96AY3 582 aa24.49■■□□□ 1.51
SHOX2-204ENST00000483851 MPP4Q96JB8 637 aa24.49■■□□□ 1.51
SHOX2-204ENST00000483851 ADAP2Q9NPF8 381 aa24.49■■□□□ 1.51
SHOX2-204ENST00000483851 RSL24D1Q9UHA3 163 aaKnown RBP24.49■■□□□ 1.51
SHOX2-204ENST00000483851 SRPK3Q9UPE1 567 aa24.49■■□□□ 1.51
SHOX2-204ENST00000483851 CCDC88CQ9P219 2028 aa24.49■■□□□ 1.51
SHOX2-204ENST00000483851 SYT5O00445 386 aa24.49■■□□□ 1.51
SHOX2-204ENST00000483851 TNFRSF1BP20333 461 aa24.49■■□□□ 1.51
SHOX2-204ENST00000483851 SLC9A6Q92581 669 aa24.49■■□□□ 1.51
SHOX2-204ENST00000483851 RIT1Q92963 219 aa24.49■■□□□ 1.51
SHOX2-204ENST00000483851 DGAT2Q96PD7 388 aa24.49■■□□□ 1.51
SHOX2-204ENST00000483851 MTHFD2LQ9H903 347 aaPredicted RBP24.49■■□□□ 1.51
SHOX2-204ENST00000483851 PDP1Q9P0J1 537 aaPredicted RBP24.49■■□□□ 1.51
SHOX2-204ENST00000483851 TMEFF2Q9UIK5 374 aaPredicted RBP24.49■■□□□ 1.51
SHOX2-204ENST00000483851 KCND3Q9UK17 655 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms