RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 NAGSQ8N159 534 aa3□□□□□ -1.93
SMC6-208ENST00000481708 PYROXD2Q8N2H3 581 aa3□□□□□ -1.93
SMC6-208ENST00000481708 LRTM2Q8N967 370 aa3□□□□□ -1.93
SMC6-208ENST00000481708 NUDCD2Q8WVJ2 157 aa3□□□□□ -1.93
SMC6-208ENST00000481708 ANP32BQ92688 251 aaKnown RBP3□□□□□ -1.93
SMC6-208ENST00000481708 NAF1Q96HR8 494 aaKnown RBP3□□□□□ -1.93
SMC6-208ENST00000481708 PBKQ96KB5 322 aa3□□□□□ -1.93
SMC6-208ENST00000481708 PARD6GQ9BYG4 376 aaPredicted RBP3□□□□□ -1.93
SMC6-208ENST00000481708 ENPP5Q9UJA9 477 aa3□□□□□ -1.93
SMC6-208ENST00000481708 CSDC2Q9Y534 153 aaKnown RBP3□□□□□ -1.93
SMC6-208ENST00000481708 CITO14578 2027 aa3□□□□□ -1.93
SMC6-208ENST00000481708 MTMR11A4FU01 709 aa3□□□□□ -1.93
SMC6-208ENST00000481708 SERINC4A6NH21 518 aa3□□□□□ -1.93
SMC6-208ENST00000481708 SNTNA6NMZ2 147 aa3□□□□□ -1.93
SMC6-208ENST00000481708 PATE3B3GLJ2 98 aa3□□□□□ -1.93
SMC6-208ENST00000481708 PPIAL4DF5H284 164 aa3□□□□□ -1.93
SMC6-208ENST00000481708 LDB2O43679 373 aa3□□□□□ -1.93
SMC6-208ENST00000481708 TIMM8AO60220 97 aaPredicted RBP3□□□□□ -1.93
SMC6-208ENST00000481708 MFAP3LO75121 409 aa3□□□□□ -1.93
SMC6-208ENST00000481708 AGTP01019 485 aa3□□□□□ -1.93
SMC6-208ENST00000481708 ETS2P15036 469 aa3□□□□□ -1.93
SMC6-208ENST00000481708 AOC1P19801 751 aa3□□□□□ -1.93
SMC6-208ENST00000481708 LONP1P36776 959 aaKnown RBP3□□□□□ -1.93
SMC6-208ENST00000481708 RPS15P62841 145 aaKnown RBP3□□□□□ -1.93
SMC6-208ENST00000481708 NOP14P78316 857 aaKnown RBP3□□□□□ -1.93
SMC6-208ENST00000481708 RPP38P78345 283 aaKnown RBP3□□□□□ -1.93
SMC6-208ENST00000481708 ITGADQ13349 1161 aa3□□□□□ -1.93
SMC6-208ENST00000481708 CARTPTQ16568 116 aa3□□□□□ -1.93
SMC6-208ENST00000481708 ACKR1Q16570 336 aa3□□□□□ -1.93
SMC6-208ENST00000481708 MAPK6Q16659 721 aa3□□□□□ -1.93
SMC6-208ENST00000481708 PARP6Q2NL67 630 aa3□□□□□ -1.93
SMC6-208ENST00000481708 KLHL40Q2TBA0 621 aa3□□□□□ -1.93
SMC6-208ENST00000481708 VSTM1Q6UX27 236 aa3□□□□□ -1.93
SMC6-208ENST00000481708 CD300LGQ6UXG3 332 aa3□□□□□ -1.93
SMC6-208ENST00000481708 RBFAQ8N0V3 343 aa3□□□□□ -1.93
SMC6-208ENST00000481708 BBS1Q8NFJ9 593 aa3□□□□□ -1.93
SMC6-208ENST00000481708 PELI1Q96FA3 418 aa3□□□□□ -1.93
SMC6-208ENST00000481708 CXorf58Q96LI9 332 aa3□□□□□ -1.93
SMC6-208ENST00000481708 BTBD10Q9BSF8 475 aa3□□□□□ -1.93
SMC6-208ENST00000481708 MCRIP2Q9BUT9 160 aaKnown RBP3□□□□□ -1.93
SMC6-208ENST00000481708 ZBP1Q9H171 429 aa3□□□□□ -1.93
SMC6-208ENST00000481708 TMEM165Q9HC07 324 aa3□□□□□ -1.93
SMC6-208ENST00000481708 ZNF701Q9NV72 531 aaPredicted RBP3□□□□□ -1.93
SMC6-208ENST00000481708 C1RLQ9NZP8 487 aa3□□□□□ -1.93
SMC6-208ENST00000481708 RCC2Q9P258 522 aaKnown RBP3□□□□□ -1.93
SMC6-208ENST00000481708 RUVBL2Q9Y230 463 aaKnown RBP3□□□□□ -1.93
SMC6-208ENST00000481708 SLC9A8Q9Y2E8 581 aa3□□□□□ -1.93
SMC6-208ENST00000481708 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3□□□□□ -1.93
SMC6-208ENST00000481708 A0A1W2PPV9 198 aa3□□□□□ -1.93
SMC6-208ENST00000481708 HYKKA2RU49 373 aa3□□□□□ -1.93
SMC6-208ENST00000481708 OTOL1A6NHN0 477 aaPredicted RBP3□□□□□ -1.93
SMC6-208ENST00000481708 ZNF99A8MXY4 864 aaPredicted RBP3□□□□□ -1.93
SMC6-208ENST00000481708 BTN3A3O00478 584 aa3□□□□□ -1.93
SMC6-208ENST00000481708 SDC3O75056 442 aa3□□□□□ -1.93
SMC6-208ENST00000481708 KRT6AP02538 564 aa3□□□□□ -1.93
SMC6-208ENST00000481708 CPA3P15088 417 aa3□□□□□ -1.93
SMC6-208ENST00000481708 RPL21P46778 160 aaKnown RBP3□□□□□ -1.93
SMC6-208ENST00000481708 MYBPC1Q00872 1141 aa3□□□□□ -1.93
SMC6-208ENST00000481708 CUL1Q13616 776 aa3□□□□□ -1.93
SMC6-208ENST00000481708 NR1D2Q14995 579 aa3□□□□□ -1.93
SMC6-208ENST00000481708 CDKN3Q16667 212 aa3□□□□□ -1.93
SMC6-208ENST00000481708 SPANXN2Q5MJ10 180 aa3□□□□□ -1.93
SMC6-208ENST00000481708 PDSS1Q5T2R2 415 aa3□□□□□ -1.93
SMC6-208ENST00000481708 XP32Q5T750 250 aa3□□□□□ -1.93
SMC6-208ENST00000481708 OR4C11Q6IEV9 310 aa3□□□□□ -1.93
SMC6-208ENST00000481708 SYCE2Q6PIF2 218 aa3□□□□□ -1.93
SMC6-208ENST00000481708 MB21D2Q8IYB1 491 aaPredicted RBP3□□□□□ -1.93
SMC6-208ENST00000481708 ZNF683Q8IZ20 524 aa3□□□□□ -1.93
SMC6-208ENST00000481708 PQLC3Q8N755 202 aa3□□□□□ -1.93
SMC6-208ENST00000481708 TMEM105Q8N8V8 129 aa3□□□□□ -1.93
SMC6-208ENST00000481708 LMNTD1Q8N9Z9 388 aa3□□□□□ -1.93
SMC6-208ENST00000481708 ZNF397Q8NF99 534 aaPredicted RBP3□□□□□ -1.93
SMC6-208ENST00000481708 ASZ1Q8WWH4 475 aa3□□□□□ -1.93
SMC6-208ENST00000481708 PIBF1Q8WXW3 757 aa3□□□□□ -1.93
SMC6-208ENST00000481708 RAB39BQ96DA2 213 aa3□□□□□ -1.93
SMC6-208ENST00000481708 LGALS12Q96DT0 336 aa3□□□□□ -1.93
SMC6-208ENST00000481708 TEKT3Q9BXF9 490 aa3□□□□□ -1.93
SMC6-208ENST00000481708 BLZF1Q9H2G9 400 aa3□□□□□ -1.93
SMC6-208ENST00000481708 FOXP1Q9H334 677 aaPredicted RBP3□□□□□ -1.93
SMC6-208ENST00000481708 LY9Q9HBG7 655 aa3□□□□□ -1.93
SMC6-208ENST00000481708 PARVGQ9HBI0 331 aa3□□□□□ -1.93
SMC6-208ENST00000481708 MOV10Q9HCE1 1003 aaKnown RBP3□□□□□ -1.93
SMC6-208ENST00000481708 PEF1Q9UBV8 284 aaKnown RBP3□□□□□ -1.93
SMC6-208ENST00000481708 TECTAO75443 2155 aa3□□□□□ -1.93
SMC6-208ENST00000481708 C11orf97A0A1B0GVM6 126 aaPredicted RBP2.99□□□□□ -1.93
SMC6-208ENST00000481708 GOLGA8TH3BQL2 631 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 M0R296 226 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 HDAC3O15379 428 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 EXTL3O43909 919 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 TXNDC12O95881 172 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 IGLV3-19P01714 112 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 TSPAN8P19075 237 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 BMP5P22003 454 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 CHI3L1P36222 383 aaPredicted RBP2.99□□□□□ -1.93
SMC6-208ENST00000481708 THOP1P52888 689 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 CCZ1BP86790 482 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 CCZ1P86791 482 aaPredicted RBP2.99□□□□□ -1.93
SMC6-208ENST00000481708 DRP2Q13474 957 aa2.99□□□□□ -1.93
SMC6-208ENST00000481708 EXOSC7Q15024 291 aaKnown RBP2.99□□□□□ -1.93
SMC6-208ENST00000481708 TGFBIQ15582 683 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms