RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 OR51Q1Q8NH59 317 aa10.29□□□□□ -0.76
VTI1A-204ENST00000480057 OR1L3Q8NH93 324 aa10.29□□□□□ -0.76
VTI1A-204ENST00000480057 GIPC3Q8TF64 312 aa10.29□□□□□ -0.76
VTI1A-204ENST00000480057 CYGBQ8WWM9 190 aa10.29□□□□□ -0.76
VTI1A-204ENST00000480057 ZNF501Q96CX3 271 aaPredicted RBP10.29□□□□□ -0.76
VTI1A-204ENST00000480057 RBM18Q96H35 190 aaKnown RBP10.29□□□□□ -0.76
VTI1A-204ENST00000480057 DGAT2Q96PD7 388 aa10.29□□□□□ -0.76
VTI1A-204ENST00000480057 NUDT22Q9BRQ3 303 aa10.29□□□□□ -0.76
VTI1A-204ENST00000480057 YIPF4Q9BSR8 244 aa10.29□□□□□ -0.76
VTI1A-204ENST00000480057 AMBRA1Q9C0C7 1298 aa10.29□□□□□ -0.76
VTI1A-204ENST00000480057 ZNF350Q9GZX5 532 aa10.29□□□□□ -0.76
VTI1A-204ENST00000480057 SAP130Q9H0E3 1048 aa10.29□□□□□ -0.76
VTI1A-204ENST00000480057 TOR3AQ9H497 397 aa10.29□□□□□ -0.76
VTI1A-204ENST00000480057 MTHFD2LQ9H903 347 aaPredicted RBP10.29□□□□□ -0.76
VTI1A-204ENST00000480057 SMURF2Q9HAU4 748 aa10.29□□□□□ -0.76
VTI1A-204ENST00000480057 EQTNQ9NQ60 294 aa10.29□□□□□ -0.76
VTI1A-204ENST00000480057 FAM118AQ9NWS6 357 aa10.29□□□□□ -0.76
VTI1A-204ENST00000480057 PDP1Q9P0J1 537 aaPredicted RBP10.29□□□□□ -0.76
VTI1A-204ENST00000480057 TMEM9Q9P0T7 183 aa10.29□□□□□ -0.76
VTI1A-204ENST00000480057 ENOPH1Q9UHY7 261 aa10.29□□□□□ -0.76
VTI1A-204ENST00000480057 CLDN16Q9Y5I7 305 aa10.29□□□□□ -0.76
VTI1A-204ENST00000480057 HSPE1-MOB4S4R3N1 261 aa10.29□□□□□ -0.76
VTI1A-204ENST00000480057 TRIOO75962 3097 aa10.28□□□□□ -0.76
VTI1A-204ENST00000480057 A0A1B0GX78 115 aa10.28□□□□□ -0.76
VTI1A-204ENST00000480057 CPED1A4D0V7 1026 aa10.28□□□□□ -0.76
VTI1A-204ENST00000480057 TRIM64A6NGJ6 449 aa10.28□□□□□ -0.76
VTI1A-204ENST00000480057 A6NHS1 94 aa10.28□□□□□ -0.76
VTI1A-204ENST00000480057 H3BNH8 94 aa10.28□□□□□ -0.76
VTI1A-204ENST00000480057 UGT2B11O75310 529 aa10.28□□□□□ -0.76
VTI1A-204ENST00000480057 DIRAS1O95057 198 aa10.28□□□□□ -0.76
VTI1A-204ENST00000480057 OXSR1O95747 527 aaPredicted RBP10.28□□□□□ -0.76
VTI1A-204ENST00000480057 CBX7O95931 251 aa10.28□□□□□ -0.76
VTI1A-204ENST00000480057 RPLP0P05388 317 aaKnown RBP10.28□□□□□ -0.76
VTI1A-204ENST00000480057 S1PR1P21453 382 aa10.28□□□□□ -0.76
VTI1A-204ENST00000480057 PTGER1P34995 402 aa10.28□□□□□ -0.76
VTI1A-204ENST00000480057 OR1E2P47887 323 aa10.28□□□□□ -0.76
VTI1A-204ENST00000480057 SEPHS1P49903 392 aa10.28□□□□□ -0.76
VTI1A-204ENST00000480057 NUBP1P53384 320 aa10.28□□□□□ -0.76
VTI1A-204ENST00000480057 MAT1AQ00266 395 aaKnown RBP10.28□□□□□ -0.76
VTI1A-204ENST00000480057 SPIBQ01892 262 aa10.28□□□□□ -0.76
VTI1A-204ENST00000480057 FUT7Q11130 342 aa10.28□□□□□ -0.76
VTI1A-204ENST00000480057 DUSP8Q13202 625 aa10.28□□□□□ -0.76
VTI1A-204ENST00000480057 TRA2AQ13595 282 aaKnown RBP eCLIP10.28□□□□□ -0.76
VTI1A-204ENST00000480057 KEAP1Q14145 624 aa10.28□□□□□ -0.76
VTI1A-204ENST00000480057 KCNAB1Q14722 419 aa10.28□□□□□ -0.76
VTI1A-204ENST00000480057 DUSP5Q16690 384 aa10.28□□□□□ -0.76
VTI1A-204ENST00000480057 ZSWIM7Q19AV6 140 aa10.28□□□□□ -0.76
VTI1A-204ENST00000480057 PERM1Q5SV97 790 aa10.28□□□□□ -0.76
VTI1A-204ENST00000480057 HS3ST5Q8IZT8 346 aa10.28□□□□□ -0.76
VTI1A-204ENST00000480057 LINC00471Q8N535 108 aa10.28□□□□□ -0.76
VTI1A-204ENST00000480057 EID2Q8N6I1 236 aa10.28□□□□□ -0.76
VTI1A-204ENST00000480057 SLC16A11Q8NCK7 471 aa10.28□□□□□ -0.76
VTI1A-204ENST00000480057 OR7G1Q8NGA0 311 aa10.28□□□□□ -0.76
VTI1A-204ENST00000480057 OIT3Q8WWZ8 545 aa10.28□□□□□ -0.76
VTI1A-204ENST00000480057 RIT1Q92963 219 aa10.28□□□□□ -0.76
VTI1A-204ENST00000480057 MBOAT4Q96T53 435 aa10.28□□□□□ -0.76
VTI1A-204ENST00000480057 SDF2Q99470 211 aa10.28□□□□□ -0.76
VTI1A-204ENST00000480057 ARHGDIGQ99819 225 aa10.28□□□□□ -0.76
VTI1A-204ENST00000480057 ALOXE3Q9BYJ1 711 aa10.28□□□□□ -0.76
VTI1A-204ENST00000480057 POLR2J2Q9GZM3 115 aaKnown RBP10.28□□□□□ -0.76
VTI1A-204ENST00000480057 POLR2J3Q9H1A7 115 aaKnown RBP10.28□□□□□ -0.76
VTI1A-204ENST00000480057 ZNF304Q9HCX3 659 aa10.28□□□□□ -0.76
VTI1A-204ENST00000480057 ADAP2Q9NPF8 381 aa10.28□□□□□ -0.76
VTI1A-204ENST00000480057 LANCL2Q9NS86 450 aa10.28□□□□□ -0.76
VTI1A-204ENST00000480057 FGF21Q9NSA1 209 aa10.28□□□□□ -0.76
VTI1A-204ENST00000480057 ACER3Q9NUN7 267 aa10.28□□□□□ -0.76
VTI1A-204ENST00000480057 KLHL28Q9NXS3 571 aa10.28□□□□□ -0.76
VTI1A-204ENST00000480057 KIF17Q9P2E2 1029 aa10.28□□□□□ -0.76
VTI1A-204ENST00000480057 ZNF232Q9UNY5 417 aa10.28□□□□□ -0.76
VTI1A-204ENST00000480057 MYRFQ9Y2G1 1151 aa10.28□□□□□ -0.76
VTI1A-204ENST00000480057 WDR45Q9Y484 360 aa10.28□□□□□ -0.76
VTI1A-204ENST00000480057 MAGED1Q9Y5V3 778 aaPredicted RBP10.28□□□□□ -0.76
VTI1A-204ENST00000480057 KCNE3Q9Y6H6 103 aa10.28□□□□□ -0.76
VTI1A-204ENST00000480057 U3KQV3 271 aa10.28□□□□□ -0.76
VTI1A-204ENST00000480057 PI4KAP42356 2102 aa10.28□□□□□ -0.76
VTI1A-204ENST00000480057 ARID1BQ8NFD5 2236 aaPredicted RBP10.27□□□□□ -0.76
VTI1A-204ENST00000480057 A0A1W2PQM1 296 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 E9PQ18 207 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 PRAMEF2O60811 474 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 STX11O75558 287 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 GADD45GO95257 159 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 ONECUT2O95948 504 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 HBQ1P09105 142 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 CT62P0C5K7 136 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 MYF5P13349 255 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 TNFRSF1BP20333 461 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 FBLP22087 321 aaKnown RBP10.27□□□□□ -0.77
VTI1A-204ENST00000480057 RPS4Y1P22090 263 aaKnown RBP10.27□□□□□ -0.77
VTI1A-204ENST00000480057 PRKACGP22612 351 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 AVPR2P30518 371 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 RYKP34925 604 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 DAPP51397 102 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 TUBA4AP68366 448 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 POU6F2P78424 691 aaPredicted RBP10.27□□□□□ -0.77
VTI1A-204ENST00000480057 CCL7P80098 99 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 CHRNEQ04844 493 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 KCNAB2Q13303 367 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 LARS2Q15031 903 aaKnown RBP10.27□□□□□ -0.77
VTI1A-204ENST00000480057 ANGPT1Q15389 498 aa10.27□□□□□ -0.77
VTI1A-204ENST00000480057 ZNHIT3Q15649 155 aaPredicted RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms