RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 OR9A4Q8NGU2 314 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 OR6Y1Q8NGX8 325 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 CHPT1Q8WUD6 406 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 TWIST2Q8WVJ9 160 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 RASSF5Q8WWW0 418 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 ZCCHC14Q8WYQ9 949 aaKnown RBP5.81□□□□□ -1.48
SF3B1-209ENST00000479532 ZNF75CPQ92670 426 aaPredicted RBP5.81□□□□□ -1.48
SF3B1-209ENST00000479532 SDCCAG3Q96C92 435 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 METTL2AQ96IZ6 378 aaKnown RBP5.81□□□□□ -1.48
SF3B1-209ENST00000479532 PPP3R2Q96LZ3 170 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 F2RL3Q96RI0 385 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 KCNA7Q96RP8 456 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 MACROD1Q9BQ69 325 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 ECSITQ9BQ95 431 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 GPR87Q9BY21 358 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 OR51B5Q9H339 312 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 KLHL31Q9H511 634 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 DENND2DQ9H6A0 471 aaPredicted RBP5.81□□□□□ -1.48
SF3B1-209ENST00000479532 GPN2Q9H9Y4 310 aaPredicted RBP5.81□□□□□ -1.48
SF3B1-209ENST00000479532 WDR41Q9HAD4 459 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 DIABLOQ9NR28 239 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 LYARQ9NX58 379 aaKnown RBP5.81□□□□□ -1.48
SF3B1-209ENST00000479532 MS4A12Q9NXJ0 267 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 TRPC4Q9UBN4 977 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 PHF11Q9UIL8 331 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 ADAM29Q9UKF5 820 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 IFT52Q9Y366 437 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 TIMM22Q9Y584 194 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 MAU2Q9Y6X3 613 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 SDK2Q58EX2 2172 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 GNG14A0A1W2PPG7 69 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 TRPC5OSA6NMA1 111 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 H0YJX3 145 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 SGK494L7N484 410 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 SAP18O00422 153 aaKnown RBP5.8□□□□□ -1.48
SF3B1-209ENST00000479532 CLDN4O14493 209 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 PLPP1O14494 284 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 PCDH17O14917 1159 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 CASQ2O14958 399 aaPredicted RBP5.8□□□□□ -1.48
SF3B1-209ENST00000479532 KLK10O43240 276 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 ITM2AO43736 263 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 SNNO75324 88 aaPredicted RBP5.8□□□□□ -1.48
SF3B1-209ENST00000479532 SH3BGRLO75368 114 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 RDH16O75452 317 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 LYPLA1O75608 230 aaPredicted RBP5.8□□□□□ -1.48
SF3B1-209ENST00000479532 TNFAIP8O95379 198 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 ONECUT2O95948 504 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 HEXBP07686 556 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 CYC1P08574 325 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 ALOX5P09917 674 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 SMIM10L1P0DMW3 83 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 PF4V1P10720 104 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 UQCRBP14927 111 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 HIST1H1TP22492 207 aaPredicted RBP5.8□□□□□ -1.48
SF3B1-209ENST00000479532 CPN2P22792 545 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 PPP2R1BP30154 601 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 TTKP33981 857 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 THBS2P35442 1172 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 GSTM5P46439 218 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 OR1D4P47884 311 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 BCAP31P51572 246 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 UCNP55089 124 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 FOXA1P55317 472 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 RAB38P57729 211 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 SRSF2Q01130 221 aaKnown RBP5.8□□□□□ -1.48
SF3B1-209ENST00000479532 BTKQ06187 659 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 TBL3Q12788 808 aaKnown RBP5.8□□□□□ -1.48
SF3B1-209ENST00000479532 DNASE1L3Q13609 305 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 ABRAXAS2Q15018 415 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 NCF4Q15080 339 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 ZNF829Q3KNS6 432 aaPredicted RBP5.8□□□□□ -1.48
SF3B1-209ENST00000479532 TOR2AQ5JU69 321 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 TCHHL1Q5QJ38 904 aaPredicted RBP5.8□□□□□ -1.48
SF3B1-209ENST00000479532 CCNYL2Q5T2Q4 361 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 ADNP2Q6IQ32 1131 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 PPP4R4Q6NUP7 873 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 RAB43Q86YS6 212 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 METTL4Q8N3J2 472 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 ZCCHC7Q8N3Z6 543 aaKnown RBP5.8□□□□□ -1.48
SF3B1-209ENST00000479532 RNF175Q8N4F7 328 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 FAM26EQ8N5C1 309 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 ZNF781Q8N8C0 355 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 CATSPER1Q8NEC5 780 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 OR51Q1Q8NH59 317 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 CT55Q8WUE5 264 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 METTL21AQ8WXB1 218 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 C19orf60Q96EN9 201 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 RNF31Q96EP0 1072 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 SMIM10Q96HG1 83 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 C7orf26Q96N11 449 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 OR1F2PQ96R84 312 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 PSD2Q9BQI7 771 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 SLC39A3Q9BRY0 314 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 BTBD10Q9BSF8 475 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 FAIM2Q9BWQ8 316 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 ACPTQ9BZG2 426 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 SPRY4Q9C004 299 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 QRSL1Q9H0R6 528 aaKnown RBP5.8□□□□□ -1.48
SF3B1-209ENST00000479532 C1orf21Q9H246 121 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 CHST8Q9H2A9 424 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms