RNA–Protein interactions for RNA: ENST00000478063.2

LMNA-214, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 285 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-214ENST00000478063 CDK6Q00534 326 aa12.39□□□□□ -0.43
LMNA-214ENST00000478063 RBBP4Q09028 425 aa12.39□□□□□ -0.43
LMNA-214ENST00000478063 CAMK2BQ13554 666 aa12.39□□□□□ -0.43
LMNA-214ENST00000478063 SCARB2Q14108 478 aa12.39□□□□□ -0.43
LMNA-214ENST00000478063 ZNHIT3Q15649 155 aaPredicted RBP12.39□□□□□ -0.43
LMNA-214ENST00000478063 ZNF630Q2M218 657 aaPredicted RBP12.39□□□□□ -0.43
LMNA-214ENST00000478063 ATAD3BQ5T9A4 648 aa12.39□□□□□ -0.43
LMNA-214ENST00000478063 GLYATQ6IB77 296 aa12.39□□□□□ -0.43
LMNA-214ENST00000478063 C16orf62Q7Z3J2 963 aa12.39□□□□□ -0.43
LMNA-214ENST00000478063 SPATA24Q86W54 205 aa12.39□□□□□ -0.43
LMNA-214ENST00000478063 PROSER1Q86XN7 944 aa12.39□□□□□ -0.43
LMNA-214ENST00000478063 ZNF615Q8N8J6 731 aa12.39□□□□□ -0.43
LMNA-214ENST00000478063 SLC16A11Q8NCK7 471 aa12.39□□□□□ -0.43
LMNA-214ENST00000478063 C16orf52Q8NHV5 167 aa12.39□□□□□ -0.43
LMNA-214ENST00000478063 ZNF721Q8TF20 911 aa12.39□□□□□ -0.43
LMNA-214ENST00000478063 CDS1Q92903 461 aa12.39□□□□□ -0.43
LMNA-214ENST00000478063 NKD1Q969G9 470 aa12.39□□□□□ -0.43
LMNA-214ENST00000478063 FAM162AQ96A26 154 aa12.39□□□□□ -0.43
LMNA-214ENST00000478063 NUDT9Q9BW91 350 aa12.39□□□□□ -0.43
LMNA-214ENST00000478063 ITPAQ9BY32 194 aa12.39□□□□□ -0.43
LMNA-214ENST00000478063 EXD2Q9NVH0 621 aa12.39□□□□□ -0.43
LMNA-214ENST00000478063 ACTR3BQ9P1U1 418 aa12.39□□□□□ -0.43
LMNA-214ENST00000478063 PRODH2Q9UF12 536 aa12.39□□□□□ -0.43
LMNA-214ENST00000478063 KLK13Q9UKR3 277 aa12.39□□□□□ -0.43
LMNA-214ENST00000478063 ANGPT4Q9Y264 503 aa12.39□□□□□ -0.43
LMNA-214ENST00000478063 DTX4Q9Y2E6 619 aa12.39□□□□□ -0.43
LMNA-214ENST00000478063 LOC102723996A0A087X1L8 192 aa12.38□□□□□ -0.43
LMNA-214ENST00000478063 DUXAA6NLW8 204 aa12.38□□□□□ -0.43
LMNA-214ENST00000478063 PCDH17O14917 1159 aa12.38□□□□□ -0.43
LMNA-214ENST00000478063 DXOO77932 396 aaKnown RBP12.38□□□□□ -0.43
LMNA-214ENST00000478063 AGR2O95994 175 aa12.38□□□□□ -0.43
LMNA-214ENST00000478063 IGKV3-11P04433 115 aa12.38□□□□□ -0.43
LMNA-214ENST00000478063 NR2F1P10589 423 aa12.38□□□□□ -0.43
LMNA-214ENST00000478063 MMP11P24347 488 aa12.38□□□□□ -0.43
LMNA-214ENST00000478063 AQP1P29972 269 aa12.38□□□□□ -0.43
LMNA-214ENST00000478063 POLE2P56282 527 aa12.38□□□□□ -0.43
LMNA-214ENST00000478063 CCNIQ14094 377 aa12.38□□□□□ -0.43
LMNA-214ENST00000478063 VEZF1Q14119 521 aa12.38□□□□□ -0.43
LMNA-214ENST00000478063 RTP5Q14D33 572 aa12.38□□□□□ -0.43
LMNA-214ENST00000478063 PCOLCEQ15113 449 aa12.38□□□□□ -0.43
LMNA-214ENST00000478063 FXNQ16595 210 aa12.38□□□□□ -0.43
LMNA-214ENST00000478063 DUSP5Q16690 384 aa12.38□□□□□ -0.43
LMNA-214ENST00000478063 GPAT3Q53EU6 434 aa12.38□□□□□ -0.43
LMNA-214ENST00000478063 LCN8Q6JVE9 175 aa12.38□□□□□ -0.43
LMNA-214ENST00000478063 SPPL2CQ8IUH8 684 aa12.38□□□□□ -0.43
LMNA-214ENST00000478063 SLC30A8Q8IWU4 369 aa12.38□□□□□ -0.43
LMNA-214ENST00000478063 COX18Q8N8Q8 333 aa12.38□□□□□ -0.43
LMNA-214ENST00000478063 B3GNT7Q8NFL0 401 aa12.38□□□□□ -0.43
LMNA-214ENST00000478063 OR1N1Q8NGS0 311 aa12.38□□□□□ -0.43
LMNA-214ENST00000478063 GPR151Q8TDV0 419 aa12.38□□□□□ -0.43
LMNA-214ENST00000478063 KIAA1143Q96AT1 154 aaPredicted RBP12.38□□□□□ -0.43
LMNA-214ENST00000478063 SLC35A4Q96G79 324 aa12.38□□□□□ -0.43
LMNA-214ENST00000478063 TMEM19Q96HH6 336 aa12.38□□□□□ -0.43
LMNA-214ENST00000478063 NSMCE2Q96MF7 247 aa12.38□□□□□ -0.43
LMNA-214ENST00000478063 VSTM2LQ96N03 204 aa12.38□□□□□ -0.43
LMNA-214ENST00000478063 STACQ99469 402 aa12.38□□□□□ -0.43
LMNA-214ENST00000478063 WDR77Q9BQA1 342 aaPredicted RBP12.38□□□□□ -0.43
LMNA-214ENST00000478063 LMF2Q9BU23 707 aaKnown RBP12.38□□□□□ -0.43
LMNA-214ENST00000478063 GPR87Q9BY21 358 aa12.38□□□□□ -0.43
LMNA-214ENST00000478063 PIGUQ9H490 435 aa12.38□□□□□ -0.43
LMNA-214ENST00000478063 WDR70Q9NW82 654 aa12.38□□□□□ -0.43
LMNA-214ENST00000478063 CFL2Q9Y281 166 aa12.38□□□□□ -0.43
LMNA-214ENST00000478063 HS3ST3B1Q9Y662 390 aa12.38□□□□□ -0.43
LMNA-214ENST00000478063 KCNE3Q9Y6H6 103 aa12.38□□□□□ -0.43
LMNA-214ENST00000478063 TRABD2BA6NFA1 517 aa12.37□□□□□ -0.43
LMNA-214ENST00000478063 SOCS6O14544 535 aa12.37□□□□□ -0.43
LMNA-214ENST00000478063 TERTO14746 1132 aaKnown RBP12.37□□□□□ -0.43
LMNA-214ENST00000478063 ENTPD5O75356 428 aa12.37□□□□□ -0.43
LMNA-214ENST00000478063 CREG1O75629 220 aa12.37□□□□□ -0.43
LMNA-214ENST00000478063 LIPCP11150 499 aa12.37□□□□□ -0.43
LMNA-214ENST00000478063 F8A1P23610 371 aa12.37□□□□□ -0.43
LMNA-214ENST00000478063 GABRA3P34903 492 aa12.37□□□□□ -0.43
LMNA-214ENST00000478063 SLC26A5P58743 744 aa12.37□□□□□ -0.43
LMNA-214ENST00000478063 ACTR3P61158 418 aa12.37□□□□□ -0.43
LMNA-214ENST00000478063 HPCAP84074 193 aa12.37□□□□□ -0.43
LMNA-214ENST00000478063 GNA13Q14344 377 aa12.37□□□□□ -0.43
LMNA-214ENST00000478063 PUM1Q14671 1186 aaKnown RBP eCLIP12.37□□□□□ -0.434e-11■□□□□ 9
LMNA-214ENST00000478063 SSPNQ14714 243 aa12.37□□□□□ -0.43
LMNA-214ENST00000478063 NNATQ16517 81 aa12.37□□□□□ -0.43
LMNA-214ENST00000478063 SYPL1Q16563 259 aa12.37□□□□□ -0.43
LMNA-214ENST00000478063 LRRC23Q53EV4 343 aaPredicted RBP12.37□□□□□ -0.43
LMNA-214ENST00000478063 RPS26P11Q5JNZ5 115 aaPredicted RBP12.37□□□□□ -0.43
LMNA-214ENST00000478063 EXOSC6Q5RKV6 272 aaKnown RBP12.37□□□□□ -0.43
LMNA-214ENST00000478063 INTS11Q5TA45 600 aaKnown RBP12.37□□□□□ -0.43
LMNA-214ENST00000478063 HLA-DQA1Q5Y7H0 255 aa12.37□□□□□ -0.43
LMNA-214ENST00000478063 REEP3Q6NUK4 255 aa12.37□□□□□ -0.43
LMNA-214ENST00000478063 SLC29A4Q7RTT9 530 aa12.37□□□□□ -0.43
LMNA-214ENST00000478063 PPP1R32Q7Z5V6 425 aa12.37□□□□□ -0.43
LMNA-214ENST00000478063 GALNT10Q86SR1 603 aa12.37□□□□□ -0.43
LMNA-214ENST00000478063 DTX1Q86Y01 620 aa12.37□□□□□ -0.43
LMNA-214ENST00000478063 ANKFN1Q8N957 763 aa12.37□□□□□ -0.43
LMNA-214ENST00000478063 NFAM1Q8NET5 270 aaPredicted RBP12.37□□□□□ -0.43
LMNA-214ENST00000478063 SLC38A5Q8WUX1 472 aa12.37□□□□□ -0.43
LMNA-214ENST00000478063 PIK3R3Q92569 461 aa12.37□□□□□ -0.43
LMNA-214ENST00000478063 HOXB13Q92826 284 aaPredicted RBP12.37□□□□□ -0.43
LMNA-214ENST00000478063 FAM122AQ96E09 287 aa12.37□□□□□ -0.43
LMNA-214ENST00000478063 VMP1Q96GC9 406 aa12.37□□□□□ -0.43
LMNA-214ENST00000478063 RSRC1Q96IZ7 334 aaKnown RBP12.37□□□□□ -0.43
LMNA-214ENST00000478063 GAL3ST4Q96RP7 486 aa12.37□□□□□ -0.43
LMNA-214ENST00000478063 FAM117AQ9C073 453 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms