RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 CAB39LQ9H9S4 337 aa18.26■□□□□ 0.51
PDLIM1-202ENST00000477757 NSMCE4AQ9NXX6 385 aa18.26■□□□□ 0.51
PDLIM1-202ENST00000477757 MOCS1Q9NZB8 636 aa18.26■□□□□ 0.51
PDLIM1-202ENST00000477757 EHD3Q9NZN3 535 aa18.26■□□□□ 0.51
PDLIM1-202ENST00000477757 DKKL1Q9UK85 242 aa18.26■□□□□ 0.51
PDLIM1-202ENST00000477757 MRPS18CQ9Y3D5 142 aaKnown RBP18.26■□□□□ 0.51
PDLIM1-202ENST00000477757 K7EPI3 171 aa18.25■□□□□ 0.51
PDLIM1-202ENST00000477757 PHGDHO43175 533 aaKnown RBP18.25■□□□□ 0.51
PDLIM1-202ENST00000477757 PLAUP00749 431 aa18.25■□□□□ 0.51
PDLIM1-202ENST00000477757 PPP3CBP16298 524 aa18.25■□□□□ 0.51
PDLIM1-202ENST00000477757 NT5EP21589 574 aa18.25■□□□□ 0.51
PDLIM1-202ENST00000477757 TBXA2RP21731 343 aa18.25■□□□□ 0.51
PDLIM1-202ENST00000477757 PTX3P26022 381 aaPredicted RBP18.25■□□□□ 0.51
PDLIM1-202ENST00000477757 RPS4XP62701 263 aaKnown RBP18.25■□□□□ 0.51
PDLIM1-202ENST00000477757 CUL3Q13618 768 aa18.25■□□□□ 0.51
PDLIM1-202ENST00000477757 GUSBP1Q15486 140 aa18.25■□□□□ 0.51
PDLIM1-202ENST00000477757 ANKRD34AQ69YU3 496 aa18.25■□□□□ 0.51
PDLIM1-202ENST00000477757 SPC24Q8NBT2 197 aa18.25■□□□□ 0.51
PDLIM1-202ENST00000477757 TSPAN17Q96FV3 270 aa18.25■□□□□ 0.51
PDLIM1-202ENST00000477757 LCORQ96JN0 433 aaPredicted RBP18.25■□□□□ 0.51
PDLIM1-202ENST00000477757 PBKQ96KB5 322 aa18.25■□□□□ 0.51
PDLIM1-202ENST00000477757 KLHL4Q9C0H6 718 aa18.25■□□□□ 0.51
PDLIM1-202ENST00000477757 RNF122Q9H9V4 155 aa18.25■□□□□ 0.51
PDLIM1-202ENST00000477757 NUDT4Q9NZJ9 180 aa18.25■□□□□ 0.51
PDLIM1-202ENST00000477757 OPTCQ9UBM4 332 aa18.25■□□□□ 0.51
PDLIM1-202ENST00000477757 CFL2Q9Y281 166 aa18.25■□□□□ 0.51
PDLIM1-202ENST00000477757 CPMP14384 443 aa18.24■□□□□ 0.51
PDLIM1-202ENST00000477757 EPB42P16452 691 aa18.24■□□□□ 0.51
PDLIM1-202ENST00000477757 B3GALT5-AS1P59052 145 aa18.24■□□□□ 0.51
PDLIM1-202ENST00000477757 PHEXP78562 749 aa18.24■□□□□ 0.51
PDLIM1-202ENST00000477757 MORF4L2Q15014 288 aa18.24■□□□□ 0.51
PDLIM1-202ENST00000477757 UBQLNLQ8IYU4 475 aa18.24■□□□□ 0.51
PDLIM1-202ENST00000477757 GBP7Q8N8V2 638 aaPredicted RBP18.24■□□□□ 0.51
PDLIM1-202ENST00000477757 ZNF610Q8N9Z0 462 aa18.24■□□□□ 0.51
PDLIM1-202ENST00000477757 OR4K14Q8NGD5 310 aa18.24■□□□□ 0.51
PDLIM1-202ENST00000477757 PROCRQ9UNN8 238 aa18.24■□□□□ 0.51
PDLIM1-202ENST00000477757 PCDHGA11Q9Y5H2 935 aa18.24■□□□□ 0.51
PDLIM1-202ENST00000477757 GOLGA6L10A0A0M3HER8 536 aa18.23■□□□□ 0.51
PDLIM1-202ENST00000477757 OVOL3O00110 214 aa18.23■□□□□ 0.51
PDLIM1-202ENST00000477757 ZIC3O60481 467 aa18.23■□□□□ 0.51
PDLIM1-202ENST00000477757 FAM157CP0CG43 387 aa18.23■□□□□ 0.51
PDLIM1-202ENST00000477757 IVDP26440 423 aa18.23■□□□□ 0.51
PDLIM1-202ENST00000477757 CDC25BP30305 580 aa18.23■□□□□ 0.51
PDLIM1-202ENST00000477757 XKP51811 444 aa18.23■□□□□ 0.51
PDLIM1-202ENST00000477757 MYLK4Q86YV6 388 aaPredicted RBP18.23■□□□□ 0.51
PDLIM1-202ENST00000477757 UBXN10Q96LJ8 280 aa18.23■□□□□ 0.51
PDLIM1-202ENST00000477757 LAMP3Q9UQV4 416 aa18.23■□□□□ 0.51
PDLIM1-202ENST00000477757 MTO1Q9Y2Z2 717 aaKnown RBP18.23■□□□□ 0.51
PDLIM1-202ENST00000477757 ZNF175Q9Y473 711 aa18.23■□□□□ 0.51
PDLIM1-202ENST00000477757 OR6C70A6NIJ9 312 aa18.22■□□□□ 0.51
PDLIM1-202ENST00000477757 A8MV72 311 aaPredicted RBP18.22■□□□□ 0.51
PDLIM1-202ENST00000477757 EFCAB8A8MWE9 144 aa18.22■□□□□ 0.51
PDLIM1-202ENST00000477757 B4DXG7 233 aa18.22■□□□□ 0.51
PDLIM1-202ENST00000477757 TO15178 435 aa18.22■□□□□ 0.51
PDLIM1-202ENST00000477757 ABCB7O75027 752 aa18.22■□□□□ 0.51
PDLIM1-202ENST00000477757 GBAP04062 536 aa18.22■□□□□ 0.51
PDLIM1-202ENST00000477757 PEPDP12955 493 aa18.22■□□□□ 0.51
PDLIM1-202ENST00000477757 PORP16435 677 aaPredicted RBP18.22■□□□□ 0.51
PDLIM1-202ENST00000477757 TCEA1P23193 301 aaKnown RBP18.22■□□□□ 0.51
PDLIM1-202ENST00000477757 DPP4P27487 766 aa18.22■□□□□ 0.51
PDLIM1-202ENST00000477757 IDUAP35475 653 aa18.22■□□□□ 0.51
PDLIM1-202ENST00000477757 CLDN15P56746 228 aa18.22■□□□□ 0.51
PDLIM1-202ENST00000477757 MGAT2Q10469 447 aa18.22■□□□□ 0.51
PDLIM1-202ENST00000477757 PRICKLE4Q2TBC4 344 aa18.22■□□□□ 0.51
PDLIM1-202ENST00000477757 ANKMY2Q8IV38 441 aa18.22■□□□□ 0.51
PDLIM1-202ENST00000477757 REPS1Q96D71 796 aa18.22■□□□□ 0.51
PDLIM1-202ENST00000477757 TMCO6Q96DC7 493 aa18.22■□□□□ 0.51
PDLIM1-202ENST00000477757 ZBED6CLQ96FA7 236 aaPredicted RBP18.22■□□□□ 0.51
PDLIM1-202ENST00000477757 TRMT61AQ96FX7 289 aaKnown RBP18.22■□□□□ 0.51
PDLIM1-202ENST00000477757 PLPPR2Q96GM1 343 aa18.22■□□□□ 0.51
PDLIM1-202ENST00000477757 COL21A1Q96P44 957 aa18.22■□□□□ 0.51
PDLIM1-202ENST00000477757 MAT2BQ9NZL9 334 aa18.22■□□□□ 0.51
PDLIM1-202ENST00000477757 H0YIV9 168 aa18.21■□□□□ 0.51
PDLIM1-202ENST00000477757 TNFRSF21O75509 655 aa18.21■□□□□ 0.51
PDLIM1-202ENST00000477757 STMN1P16949 149 aa18.21■□□□□ 0.51
PDLIM1-202ENST00000477757 DRD5P21918 477 aa18.21■□□□□ 0.51
PDLIM1-202ENST00000477757 EEFSECP57772 596 aaKnown RBP18.21■□□□□ 0.51
PDLIM1-202ENST00000477757 EXOSC7Q15024 291 aaKnown RBP18.21■□□□□ 0.51
PDLIM1-202ENST00000477757 ZKSCAN8Q15776 578 aaPredicted RBP18.21■□□□□ 0.51
PDLIM1-202ENST00000477757 EXOC3L2Q2M3D2 409 aa18.21■□□□□ 0.51
PDLIM1-202ENST00000477757 KRTAP24-1Q3LI83 254 aa18.21■□□□□ 0.51
PDLIM1-202ENST00000477757 LIPJQ5W064 366 aa18.21■□□□□ 0.51
PDLIM1-202ENST00000477757 FAM214BQ7L5A3 538 aa18.21■□□□□ 0.51
PDLIM1-202ENST00000477757 FNDC9Q8TBE3 224 aa18.21■□□□□ 0.51
PDLIM1-202ENST00000477757 AKAP1Q92667 903 aaKnown RBP eCLIP18.21■□□□□ 0.51
PDLIM1-202ENST00000477757 SLC35A4Q96G79 324 aa18.21■□□□□ 0.51
PDLIM1-202ENST00000477757 LRRC1Q9BTT6 524 aa18.21■□□□□ 0.51
PDLIM1-202ENST00000477757 PINK1Q9BXM7 581 aa18.21■□□□□ 0.51
PDLIM1-202ENST00000477757 ALG9Q9H6U8 611 aa18.21■□□□□ 0.51
PDLIM1-202ENST00000477757 BCAP29Q9UHQ4 241 aa18.21■□□□□ 0.51
PDLIM1-202ENST00000477757 ZNF639Q9UID6 485 aa18.21■□□□□ 0.51
PDLIM1-202ENST00000477757 PLLPQ9Y342 182 aa18.21■□□□□ 0.51
PDLIM1-202ENST00000477757 SUPT3HB4E1H0 165 aa18.2■□□□□ 0.5
PDLIM1-202ENST00000477757 SUPT3HO75486 399 aa18.2■□□□□ 0.5
PDLIM1-202ENST00000477757 SEMA3DO95025 777 aa18.2■□□□□ 0.5
PDLIM1-202ENST00000477757 CBX7O95931 251 aa18.2■□□□□ 0.5
PDLIM1-202ENST00000477757 ATP1B1P05026 303 aa18.2■□□□□ 0.5
PDLIM1-202ENST00000477757 GRK2P25098 689 aa18.2■□□□□ 0.5
PDLIM1-202ENST00000477757 PPICP45877 212 aa18.2■□□□□ 0.5
PDLIM1-202ENST00000477757 ARL4CP56559 192 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms