RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 PEBP4Q96S96 227 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 PSMB7Q99436 277 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 NAP1L3Q99457 506 aaPredicted RBP3.48□□□□□ -1.85
UBR3-209ENST00000477461 TRAF4Q9BUZ4 470 aaPredicted RBP3.48□□□□□ -1.85
UBR3-209ENST00000477461 TXLNGYQ9BZA5 131 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 S1PR5Q9H228 398 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 CARD9Q9H257 536 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 POMKQ9H5K3 350 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 OPA3Q9H6K4 179 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 CCDC177Q9NQR7 707 aaPredicted RBP3.48□□□□□ -1.85
UBR3-209ENST00000477461 SDR39U1Q9NRG7 319 aaPredicted RBP3.48□□□□□ -1.85
UBR3-209ENST00000477461 GKN1Q9NS71 199 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 GPATCH2LQ9NWQ4 482 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 THEGQ9P2T0 379 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 OR12D3Q9UGF7 316 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 SAR1BQ9Y6B6 198 aa3.48□□□□□ -1.85
UBR3-209ENST00000477461 DOCK4Q8N1I0 1966 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 MYO10Q9HD67 2058 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 MYOFQ9NZM1 2061 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 ADAMTS9Q9P2N4 1935 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.47□□□□□ -1.85
UBR3-209ENST00000477461 EDDM13A0A1B0GTR0 161 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 GOLGA6L7A0A1B0GV03 622 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 C2CD4DB7Z1M9 353 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 E9PAM4 449 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 H0Y626 953 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 UBE2CO00762 179 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 TRDMT1O14717 391 aaKnown RBP3.47□□□□□ -1.85
UBR3-209ENST00000477461 TBL1XO60907 577 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 NEBLO76041 1014 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 PRAMEF12O95522 483 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 IGLV3-27P01718 113 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 RAB40ALP0C0E4 278 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 TCF4P15884 667 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 GOT1P17174 413 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 PSMC3P17980 439 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 SERPINB6P35237 376 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 CAPZA2P47755 286 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 MARCKSL1P49006 195 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 HCAR3P49019 387 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 ALDH3A2P51648 485 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 PDX1P52945 283 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 HERV-K104P61576 105 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 HNRNPKP61978 463 aaKnown RBP eCLIP3.47□□□□□ -1.85
UBR3-209ENST00000477461 DYNLT1P63172 113 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 CKAP4Q07065 602 aaKnown RBP3.47□□□□□ -1.85
UBR3-209ENST00000477461 ZNF177Q13360 481 aaPredicted RBP3.47□□□□□ -1.85
UBR3-209ENST00000477461 CDH18Q13634 790 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 DPYSL3Q14195 570 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 PDGFRLQ15198 375 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 ZNF77Q15935 545 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 DPYSL2Q16555 572 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 KYNUQ16719 465 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 CA9Q16790 459 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 UGP2Q16851 508 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 ANKRD20A8PQ5CZ79 823 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 TFDP3Q5H9I0 405 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 MS4A13Q5J8X5 152 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 TXNRD3NBQ6F5E7 133 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 SLC30A6Q6NXT4 461 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 RFWD3Q6PCD5 774 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 ZNF613Q6PF04 617 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 MFSD7Q6UXD7 560 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 TPGS1Q6ZTW0 290 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 BZW1Q7L1Q6 419 aaKnown RBP3.47□□□□□ -1.85
UBR3-209ENST00000477461 BNIPLQ7Z465 357 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 VSIG1Q86XK7 387 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 MFN1Q8IWA4 741 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 MFSD6LQ8IWD5 586 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 BBS7Q8IWZ6 715 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 ARHGAP24Q8N264 748 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 PYROXD2Q8N2H3 581 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 CARNMT1Q8N4J0 409 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 TTC30BQ8N4P2 665 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 MARVELD2Q8N4S9 558 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 ZNF557Q8N988 423 aaPredicted RBP3.47□□□□□ -1.85
UBR3-209ENST00000477461 MNS1Q8NEH6 495 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 DDI1Q8WTU0 396 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 DEPDC1BQ8WUY9 529 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 SSMEM1Q8WWF3 244 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 SUSD6Q92537 303 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 RAPGEF5Q92565 580 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 KRT35Q92764 455 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 EXOC4Q96A65 974 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 ELSPBP1Q96BH3 223 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 CAPZA3Q96KX2 299 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 SFXN2Q96NB2 322 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 XPO6Q96QU8 1125 aaKnown RBP3.47□□□□□ -1.85
UBR3-209ENST00000477461 PKP2Q99959 881 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 FERMT1Q9BQL6 677 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 ZNF670Q9BS34 389 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 BBS2Q9BXC9 721 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 OSBPL8Q9BZF1 889 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 ZYG11BQ9C0D3 744 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 TRPV4Q9HBA0 871 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 FGF21Q9NSA1 209 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 DUS2Q9NX74 493 aaKnown RBP3.47□□□□□ -1.85
UBR3-209ENST00000477461 RCOR3Q9P2K3 495 aaPredicted RBP3.47□□□□□ -1.85
UBR3-209ENST00000477461 VANGL2Q9ULK5 521 aa3.47□□□□□ -1.85
UBR3-209ENST00000477461 SNX12Q9UMY4 172 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms