RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 TRNAU1APQ9NX07 287 aaKnown RBP15.47■□□□□ 0.07
TMEM53-208ENST00000476724 TAS2R16Q9NYV7 291 aa15.47■□□□□ 0.07
TMEM53-208ENST00000476724 USP34Q70CQ2 3546 aa15.46■□□□□ 0.07
TMEM53-208ENST00000476724 BOLA2-SMG1P6H3BVE0 249 aa15.46■□□□□ 0.07
TMEM53-208ENST00000476724 PROM1O43490 865 aa15.46■□□□□ 0.07
TMEM53-208ENST00000476724 MED26O95402 600 aa15.46■□□□□ 0.07
TMEM53-208ENST00000476724 F3P13726 295 aa15.46■□□□□ 0.07
TMEM53-208ENST00000476724 PEBP1P30086 187 aaKnown RBP15.46■□□□□ 0.07
TMEM53-208ENST00000476724 IFNGR2P38484 337 aa15.46■□□□□ 0.07
TMEM53-208ENST00000476724 GPAT3Q53EU6 434 aa15.46■□□□□ 0.07
TMEM53-208ENST00000476724 AGAP7PQ5VUJ5 663 aa15.46■□□□□ 0.07
TMEM53-208ENST00000476724 FBXL6Q8N531 539 aa15.46■□□□□ 0.07
TMEM53-208ENST00000476724 TCEANCQ8N8B7 351 aa15.46■□□□□ 0.07
TMEM53-208ENST00000476724 PROKR2Q8NFJ6 384 aa15.46■□□□□ 0.07
TMEM53-208ENST00000476724 OR6T1Q8NGN1 323 aa15.46■□□□□ 0.07
TMEM53-208ENST00000476724 MSANTD3Q96H12 275 aa15.46■□□□□ 0.07
TMEM53-208ENST00000476724 CHCHD3Q9NX63 227 aaKnown RBP15.46■□□□□ 0.07
TMEM53-208ENST00000476724 FBXW2Q9UKT8 454 aa15.46■□□□□ 0.07
TMEM53-208ENST00000476724 LSM2Q9Y333 95 aaKnown RBP15.46■□□□□ 0.07
TMEM53-208ENST00000476724 ZNF780BQ9Y6R6 833 aa15.46■□□□□ 0.07
TMEM53-208ENST00000476724 WASHC1A8K0Z3 465 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 C4orf51C9J302 202 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 KIAA0513O60268 411 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 PRKRAO75569 313 aaKnown RBP15.45■□□□□ 0.06
TMEM53-208ENST00000476724 ADRA2AP08913 450 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 FOSL2P15408 326 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 TNNI3P19429 210 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 ENDOUP21128 410 aaKnown RBP15.45■□□□□ 0.06
TMEM53-208ENST00000476724 MMP11P24347 488 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 FEN1P39748 380 aaKnown RBP15.45■□□□□ 0.06
TMEM53-208ENST00000476724 BUD31P41223 144 aaPredicted RBP15.45■□□□□ 0.06
TMEM53-208ENST00000476724 GIPRP48546 466 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 PCYT1AP49585 367 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 FUT5Q11128 374 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 CDC20Q12834 499 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 SPHARQ15513 63 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 WASH2PQ6VEQ5 465 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 ZER1Q7Z7L7 766 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 FAM20CQ8IXL6 584 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 ZNF687Q8N1G0 1237 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 MORN4Q8NDC4 146 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 BMFQ96LC9 184 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 GUCD1Q96NT3 240 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 OR2M4Q96R27 311 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 MACROD1Q9BQ69 325 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 ROGDIQ9GZN7 287 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 TRIM45Q9H8W5 580 aaPredicted RBP15.45■□□□□ 0.06
TMEM53-208ENST00000476724 MAN2C1Q9NTJ4 1040 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 SPHK1Q9NYA1 384 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 DNAJC27Q9NZQ0 273 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 ISM1B1AKI9 464 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 EPPINO95925 133 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 IGFBP1P08833 259 aaPredicted RBP15.45■□□□□ 0.06
TMEM53-208ENST00000476724 IFNA8P32881 189 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 ETV6P41212 452 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 DGKEP52429 567 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 RPS15AP62244 130 aaKnown RBP15.45■□□□□ 0.06
TMEM53-208ENST00000476724 CDK5Q00535 292 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 ZNF91Q05481 1191 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 C1DQ13901 141 aaKnown RBP15.45■□□□□ 0.06
TMEM53-208ENST00000476724 GAS6Q14393 721 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 TCEA2Q15560 299 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 SSX1Q16384 188 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 C18orf63Q68DL7 685 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 COMTD1Q86VU5 262 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 AMIGO1Q86WK6 493 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 NRROSQ86YC3 692 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 SNX29P2Q8IUI4 249 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 SLC34A3Q8N130 599 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 NANOGP1Q8N7R0 232 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 NUP43Q8NFH3 380 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 SLC22A18Q96BI1 424 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 ELP4Q96EB1 424 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 OPALINQ96PE5 141 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 OR7D2Q96RA2 312 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 TSSK6Q9BXA6 273 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 CPNE5Q9HCH3 593 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 TVP23BQ9NYZ1 205 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 CRNNQ9UBG3 495 aaPredicted RBP15.45■□□□□ 0.06
TMEM53-208ENST00000476724 SEC14L4Q9UDX3 406 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 APOBEC3BQ9UH17 382 aaKnown RBP15.45■□□□□ 0.06
TMEM53-208ENST00000476724 SLC13A4Q9UKG4 626 aa15.45■□□□□ 0.06
TMEM53-208ENST00000476724 MDC1Q14676 2089 aaKnown RBP15.44■□□□□ 0.06
TMEM53-208ENST00000476724 A0A075B6Q4 140 aa15.44■□□□□ 0.06
TMEM53-208ENST00000476724 IRGMA1A4Y4 181 aa15.44■□□□□ 0.06
TMEM53-208ENST00000476724 PRSS38A1L453 326 aa15.44■□□□□ 0.06
TMEM53-208ENST00000476724 SNTNA6NMZ2 147 aa15.44■□□□□ 0.06
TMEM53-208ENST00000476724 CHRM5P08912 532 aaPredicted RBP15.44■□□□□ 0.06
TMEM53-208ENST00000476724 CERS1P27544 350 aa15.44■□□□□ 0.06
TMEM53-208ENST00000476724 MAN2A2P49641 1150 aa15.44■□□□□ 0.06
TMEM53-208ENST00000476724 SMSP52788 366 aa15.44■□□□□ 0.06
TMEM53-208ENST00000476724 GINS1Q14691 196 aa15.44■□□□□ 0.06
TMEM53-208ENST00000476724 TJAP1Q5JTD0 557 aa15.44■□□□□ 0.06
TMEM53-208ENST00000476724 ATAD3BQ5T9A4 648 aa15.44■□□□□ 0.06
TMEM53-208ENST00000476724 TMEM107Q6UX40 140 aa15.44■□□□□ 0.06
TMEM53-208ENST00000476724 IQCHQ86VS3 1027 aa15.44■□□□□ 0.06
TMEM53-208ENST00000476724 SLC22A16Q86VW1 577 aa15.44■□□□□ 0.06
TMEM53-208ENST00000476724 LYSMD2Q8IV50 215 aa15.44■□□□□ 0.06
TMEM53-208ENST00000476724 SAMD14Q8IZD0 417 aaPredicted RBP15.44■□□□□ 0.06
TMEM53-208ENST00000476724 CYP4Z2PQ8N1L4 340 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms