RNA–Protein interactions for RNA: ENST00000476466.1

SLC6A8-209, Transcript of solute carrier family 6 member 8, humanhuman

TSL 3

Gene SLC6A8, Length 470 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-209ENST00000476466 FRG2CA6NGY1 282 aa12.9□□□□□ -0.34
SLC6A8-209ENST00000476466 NPIPB8E9PQR5 432 aa12.9□□□□□ -0.34
SLC6A8-209ENST00000476466 GNB5O14775 395 aa12.9□□□□□ -0.34
SLC6A8-209ENST00000476466 LSM1O15116 133 aaKnown RBP12.9□□□□□ -0.34
SLC6A8-209ENST00000476466 TO15178 435 aa12.9□□□□□ -0.34
SLC6A8-209ENST00000476466 HNRNPRO43390 633 aaKnown RBP12.9□□□□□ -0.34
SLC6A8-209ENST00000476466 SUSD5O60279 629 aa12.9□□□□□ -0.34
SLC6A8-209ENST00000476466 CRCPO75575 148 aa12.9□□□□□ -0.34
SLC6A8-209ENST00000476466 PSMG1O95456 288 aa12.9□□□□□ -0.34
SLC6A8-209ENST00000476466 LINC00032P0C843 101 aa12.9□□□□□ -0.34
SLC6A8-209ENST00000476466 ADH7P40394 386 aa12.9□□□□□ -0.34
SLC6A8-209ENST00000476466 ETV4P43268 484 aa12.9□□□□□ -0.34
SLC6A8-209ENST00000476466 PPICP45877 212 aa12.9□□□□□ -0.34
SLC6A8-209ENST00000476466 SMSP52788 366 aa12.9□□□□□ -0.34
SLC6A8-209ENST00000476466 TFF3Q07654 80 aa12.9□□□□□ -0.34
SLC6A8-209ENST00000476466 ZNF844Q08AG5 666 aa12.9□□□□□ -0.34
SLC6A8-209ENST00000476466 HEPACAMQ14CZ8 416 aa12.9□□□□□ -0.34
SLC6A8-209ENST00000476466 ARL13AQ5H913 290 aaPredicted RBP12.9□□□□□ -0.34
SLC6A8-209ENST00000476466 TMEM107Q6UX40 140 aa12.9□□□□□ -0.34
SLC6A8-209ENST00000476466 SEM1Q6ZVN7 128 aa12.9□□□□□ -0.34
SLC6A8-209ENST00000476466 ACBD4Q8NC06 268 aa12.9□□□□□ -0.34
SLC6A8-209ENST00000476466 OR6Y1Q8NGX8 325 aa12.9□□□□□ -0.34
SLC6A8-209ENST00000476466 CLHC1Q8NHS4 586 aa12.9□□□□□ -0.34
SLC6A8-209ENST00000476466 AGR3Q8TD06 166 aa12.9□□□□□ -0.34
SLC6A8-209ENST00000476466 TRIM8Q9BZR9 551 aa12.9□□□□□ -0.34
SLC6A8-209ENST00000476466 UCK2Q9BZX2 261 aa12.9□□□□□ -0.34
SLC6A8-209ENST00000476466 LRTM1Q9HBL6 345 aa12.9□□□□□ -0.34
SLC6A8-209ENST00000476466 NPDC1Q9NQX5 325 aaPredicted RBP12.9□□□□□ -0.34
SLC6A8-209ENST00000476466 FLRT3Q9NZU0 649 aa12.9□□□□□ -0.34
SLC6A8-209ENST00000476466 C15orf41Q9Y2V0 281 aa12.9□□□□□ -0.34
SLC6A8-209ENST00000476466 CCDC151A5D8V7 595 aa12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 NKX2-6A6NCS4 301 aa12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 OR14I1A6ND48 311 aa12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 TP53I11O14683 189 aa12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 PLOD3O60568 738 aa12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 TSPAN2O60636 221 aa12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 HCN1O60741 890 aa12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 GLI4P10075 376 aa12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 SDC1P18827 310 aa12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 DRD5P21918 477 aa12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 ACVR2AP27037 513 aa12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 GDF1P27539 372 aa12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 MAN2A2P49641 1150 aa12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 TMED10P49755 219 aaKnown RBP12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 CDK9P50750 372 aaKnown RBP12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 NCBP2P52298 156 aaKnown RBP eCLIP12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 WNT3P56703 355 aa12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 NRG3P56975 720 aa12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 NAA20P61599 178 aa12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 RPL38P63173 70 aaKnown RBP12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 PSG6Q00889 435 aa12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 IFFO1Q0D2I5 559 aa12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 PMPCAQ10713 525 aa12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 RFTN2Q52LD8 501 aaPredicted RBP12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 EIPR1Q53HC9 387 aa12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 ZNF585AQ6P3V2 769 aa12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 RNF165Q6ZSG1 346 aa12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 MCEMP1Q8IX19 187 aa12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 FAM9CQ8IZT9 166 aa12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 ZNF295-AS1Q8N0V1 137 aa12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 SLC34A3Q8N130 599 aa12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 NEIL3Q8TAT5 605 aa12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 NUDT8Q8WV74 236 aa12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 RNF138Q8WVD3 245 aa12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 TWIST2Q8WVJ9 160 aa12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 CIDECQ96AQ7 238 aaPredicted RBP12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 PKNOX2Q96KN3 472 aa12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 C3orf30Q96M34 536 aa12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 AMDHD1Q96NU7 426 aa12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 SECISBP2Q96T21 854 aaKnown RBP12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 TMEM109Q9BVC6 243 aa12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 ROPN1BQ9BZX4 212 aaPredicted RBP12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 LDAHQ9H6V9 325 aa12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 ZNF395Q9H8N7 513 aaPredicted RBP12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 ROPN1Q9HAT0 212 aaPredicted RBP12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 ACKR4Q9NPB9 350 aa12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 C1orf109Q9NX04 203 aa12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 TAS2R7Q9NYW3 318 aa12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 MID2Q9UJV3 735 aa12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 SLC6A5Q9Y345 797 aa12.89□□□□□ -0.35
SLC6A8-209ENST00000476466 FAM90A27PA6NNH2 459 aa12.88□□□□□ -0.35
SLC6A8-209ENST00000476466 CAPN14A8MX76 684 aa12.88□□□□□ -0.35
SLC6A8-209ENST00000476466 H3BQF6 201 aa12.88□□□□□ -0.35
SLC6A8-209ENST00000476466 UPK1AO00322 258 aa12.88□□□□□ -0.35
SLC6A8-209ENST00000476466 BCKDKO14874 412 aa12.88□□□□□ -0.35
SLC6A8-209ENST00000476466 PIP5K1BO14986 540 aa12.88□□□□□ -0.35
SLC6A8-209ENST00000476466 ACOX3O15254 700 aa12.88□□□□□ -0.35
SLC6A8-209ENST00000476466 NPHS1O60500 1241 aa12.88□□□□□ -0.35
SLC6A8-209ENST00000476466 ICOSLGO75144 302 aa12.88□□□□□ -0.35
SLC6A8-209ENST00000476466 SEC22BO75396 215 aa12.88□□□□□ -0.35
SLC6A8-209ENST00000476466 ERN1O75460 977 aaKnown RBP12.88□□□□□ -0.35
SLC6A8-209ENST00000476466 HPNP05981 417 aa12.88□□□□□ -0.35
SLC6A8-209ENST00000476466 EFNA1P20827 205 aaPredicted RBP12.88□□□□□ -0.35
SLC6A8-209ENST00000476466 PTPN6P29350 595 aa12.88□□□□□ -0.35
SLC6A8-209ENST00000476466 CRYZQ08257 329 aaKnown RBP12.88□□□□□ -0.35
SLC6A8-209ENST00000476466 XKR7Q5GH72 579 aa12.88□□□□□ -0.35
SLC6A8-209ENST00000476466 TBCELQ5QJ74 424 aa12.88□□□□□ -0.35
SLC6A8-209ENST00000476466 TIGD3Q6B0B8 471 aa12.88□□□□□ -0.35
SLC6A8-209ENST00000476466 TMEM81Q6P7N7 255 aa12.88□□□□□ -0.35
SLC6A8-209ENST00000476466 PAOXQ6QHF9 649 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms