RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 GDAP2Q9NXN4 497 aa4.76□□□□□ -1.65
VPS50-212ENST00000476413 SLC9A8Q9Y2E8 581 aa4.76□□□□□ -1.65
VPS50-212ENST00000476413 MFHAS1Q9Y4C4 1052 aa4.76□□□□□ -1.65
VPS50-212ENST00000476413 CPQQ9Y646 472 aa4.76□□□□□ -1.65
VPS50-212ENST00000476413 FKBP7Q9Y680 259 aa4.76□□□□□ -1.65
VPS50-212ENST00000476413 SNED1Q8TER0 1413 aa4.75□□□□□ -1.65
VPS50-212ENST00000476413 NPIPA5A0A0B4J1W7 369 aa4.75□□□□□ -1.65
VPS50-212ENST00000476413 A0A0J9YWU9 116 aa4.75□□□□□ -1.65
VPS50-212ENST00000476413 A0A1B0GWJ7 208 aa4.75□□□□□ -1.65
VPS50-212ENST00000476413 LRIT2A6NDA9 550 aa4.75□□□□□ -1.65
VPS50-212ENST00000476413 FOXI3A8MTJ6 420 aaPredicted RBP4.75□□□□□ -1.65
VPS50-212ENST00000476413 NPIPA5E9PKD4 350 aa4.75□□□□□ -1.65
VPS50-212ENST00000476413 H3BTX0 84 aa4.75□□□□□ -1.65
VPS50-212ENST00000476413 SDHDO14521 159 aa4.75□□□□□ -1.65
VPS50-212ENST00000476413 SDC3O75056 442 aa4.75□□□□□ -1.65
VPS50-212ENST00000476413 PEX11AO75192 247 aa4.75□□□□□ -1.65
VPS50-212ENST00000476413 IGSF6O95976 241 aa4.75□□□□□ -1.65
VPS50-212ENST00000476413 GSTA1P08263 222 aa4.75□□□□□ -1.65
VPS50-212ENST00000476413 TSPAN8P19075 237 aa4.75□□□□□ -1.65
VPS50-212ENST00000476413 CALML3P27482 149 aa4.75□□□□□ -1.65
VPS50-212ENST00000476413 DPP4P27487 766 aa4.75□□□□□ -1.65
VPS50-212ENST00000476413 SPRP35270 261 aaPredicted RBP4.75□□□□□ -1.65
VPS50-212ENST00000476413 PTGFRP43088 359 aa4.75□□□□□ -1.65
VPS50-212ENST00000476413 HTR5AP47898 357 aa4.75□□□□□ -1.65
VPS50-212ENST00000476413 SRYQ05066 204 aa4.75□□□□□ -1.65
VPS50-212ENST00000476413 ZNF33BQ06732 778 aa4.75□□□□□ -1.65
VPS50-212ENST00000476413 RIPPLY2Q5TAB7 128 aa4.75□□□□□ -1.65
VPS50-212ENST00000476413 FAM219BQ5XKK7 198 aa4.75□□□□□ -1.65
VPS50-212ENST00000476413 EMBQ6PCB8 327 aa4.75□□□□□ -1.65
VPS50-212ENST00000476413 PAQR6Q6TCH4 344 aa4.75□□□□□ -1.65
VPS50-212ENST00000476413 GPRIN3Q6ZVF9 776 aa4.75□□□□□ -1.65
VPS50-212ENST00000476413 NET1Q7Z628 596 aaPredicted RBP4.75□□□□□ -1.65
VPS50-212ENST00000476413 ZNF573Q86YE8 665 aa4.75□□□□□ -1.65
VPS50-212ENST00000476413 GRAMD2AQ8IUY3 354 aa4.75□□□□□ -1.65
VPS50-212ENST00000476413 MAPK1IP1LQ8NDC0 245 aa4.75□□□□□ -1.65
VPS50-212ENST00000476413 C17orf47Q8NEP4 570 aa4.75□□□□□ -1.65
VPS50-212ENST00000476413 TSPAN18Q96SJ8 248 aa4.75□□□□□ -1.65
VPS50-212ENST00000476413 FAM173AQ9BQD7 235 aa4.75□□□□□ -1.65
VPS50-212ENST00000476413 THUMPD2Q9BTF0 503 aaKnown RBP4.75□□□□□ -1.65
VPS50-212ENST00000476413 TSPY26PQ9H489 355 aa4.75□□□□□ -1.65
VPS50-212ENST00000476413 SP140LQ9H930 580 aa4.75□□□□□ -1.65
VPS50-212ENST00000476413 CALHM2Q9HA72 323 aa4.75□□□□□ -1.65
VPS50-212ENST00000476413 CENPMQ9NSP4 180 aa4.75□□□□□ -1.65
VPS50-212ENST00000476413 CIDEBQ9UHD4 219 aa4.75□□□□□ -1.65
VPS50-212ENST00000476413 CACNA1FO60840 1977 aa4.74□□□□□ -1.65
VPS50-212ENST00000476413 A0A0J9YVX5 310 aa4.74□□□□□ -1.65
VPS50-212ENST00000476413 E9PQ18 207 aa4.74□□□□□ -1.65
VPS50-212ENST00000476413 NDC80O14777 642 aa4.74□□□□□ -1.65
VPS50-212ENST00000476413 PDE5AO76074 875 aa4.74□□□□□ -1.65
VPS50-212ENST00000476413 OR4F21O95013 312 aa4.74□□□□□ -1.65
VPS50-212ENST00000476413 RENP00797 406 aa4.74□□□□□ -1.65
VPS50-212ENST00000476413 IGHV3-9P01782 118 aa4.74□□□□□ -1.65
VPS50-212ENST00000476413 MELTFP08582 738 aa4.74□□□□□ -1.65
VPS50-212ENST00000476413 ANXA4P09525 319 aaPredicted RBP4.74□□□□□ -1.65
VPS50-212ENST00000476413 HOXB7P09629 217 aa4.74□□□□□ -1.65
VPS50-212ENST00000476413 SLC35G4P0C7Q5 338 aa4.74□□□□□ -1.65
VPS50-212ENST00000476413 EXOSC2Q13868 293 aaKnown RBP4.74□□□□□ -1.65
VPS50-212ENST00000476413 CYLC2Q14093 348 aaPredicted RBP4.74□□□□□ -1.65
VPS50-212ENST00000476413 ACER2Q5QJU3 275 aa4.74□□□□□ -1.65
VPS50-212ENST00000476413 SULT1C3Q6IMI6 304 aa4.74□□□□□ -1.65
VPS50-212ENST00000476413 PNCKQ6P2M8 343 aa4.74□□□□□ -1.65
VPS50-212ENST00000476413 HACD2Q6Y1H2 254 aa4.74□□□□□ -1.65
VPS50-212ENST00000476413 STOX1Q6ZVD7 989 aa4.74□□□□□ -1.65
VPS50-212ENST00000476413 PRSS48Q7RTY5 328 aa4.74□□□□□ -1.65
VPS50-212ENST00000476413 TIPARPQ7Z3E1 657 aaKnown RBP4.74□□□□□ -1.65
VPS50-212ENST00000476413 P4HA3Q7Z4N8 544 aa4.74□□□□□ -1.65
VPS50-212ENST00000476413 VPS36Q86VN1 386 aa4.74□□□□□ -1.65
VPS50-212ENST00000476413 CBWD2Q8IUF1 395 aa4.74□□□□□ -1.65
VPS50-212ENST00000476413 CSNK1G2-AS1Q8NCQ2 148 aa4.74□□□□□ -1.65
VPS50-212ENST00000476413 OR4Q3Q8NH05 313 aa4.74□□□□□ -1.65
VPS50-212ENST00000476413 TRIM15Q9C019 465 aa4.74□□□□□ -1.65
VPS50-212ENST00000476413 ADNPQ9H2P0 1102 aa4.74□□□□□ -1.65
VPS50-212ENST00000476413 HEXA-AS1Q9H8Q6 139 aa4.74□□□□□ -1.65
VPS50-212ENST00000476413 AGPAT5Q9NUQ2 364 aa4.74□□□□□ -1.65
VPS50-212ENST00000476413 CGNQ9P2M7 1197 aaKnown RBP4.74□□□□□ -1.65
VPS50-212ENST00000476413 KLK13Q9UKR3 277 aa4.74□□□□□ -1.65
VPS50-212ENST00000476413 B9D1Q9UPM9 204 aa4.74□□□□□ -1.65
VPS50-212ENST00000476413 TTC26A0AVF1 554 aa4.73□□□□□ -1.65
VPS50-212ENST00000476413 E2F3O00716 465 aa4.73□□□□□ -1.65
VPS50-212ENST00000476413 MCF2LO15068 1137 aa4.73□□□□□ -1.65
VPS50-212ENST00000476413 CHRNA1P02708 482 aa4.73□□□□□ -1.65
VPS50-212ENST00000476413 WNT2P09544 360 aa4.73□□□□□ -1.65
VPS50-212ENST00000476413 CYLC1P35663 651 aaPredicted RBP4.73□□□□□ -1.65
VPS50-212ENST00000476413 TAF7Q15545 349 aaPredicted RBP4.73□□□□□ -1.65
VPS50-212ENST00000476413 TMEM41BQ5BJD5 291 aa4.73□□□□□ -1.65
VPS50-212ENST00000476413 VWA2Q5GFL6 755 aa4.73□□□□□ -1.65
VPS50-212ENST00000476413 ARMCX5Q6P1M9 558 aa4.73□□□□□ -1.65
VPS50-212ENST00000476413 NIPAL3Q6P499 406 aa4.73□□□□□ -1.65
VPS50-212ENST00000476413 LPCAT2Q7L5N7 544 aa4.73□□□□□ -1.65
VPS50-212ENST00000476413 SLC47A2Q86VL8 602 aa4.73□□□□□ -1.65
VPS50-212ENST00000476413 CENPSQ8N2Z9 138 aa4.73□□□□□ -1.65
VPS50-212ENST00000476413 C11orf24Q96F05 449 aaPredicted RBP4.73□□□□□ -1.65
VPS50-212ENST00000476413 WBP1Q96G27 269 aa4.73□□□□□ -1.65
VPS50-212ENST00000476413 VSTM2LQ96N03 204 aa4.73□□□□□ -1.65
VPS50-212ENST00000476413 RPAP3Q9H6T3 665 aaPredicted RBP4.73□□□□□ -1.65
VPS50-212ENST00000476413 PANK3Q9H999 370 aa4.73□□□□□ -1.65
VPS50-212ENST00000476413 ESM1Q9NQ30 184 aa4.73□□□□□ -1.65
VPS50-212ENST00000476413 RCOR3Q9P2K3 495 aaPredicted RBP4.73□□□□□ -1.65
VPS50-212ENST00000476413 ATP6V1HQ9UI12 483 aa4.73□□□□□ -1.65
VPS50-212ENST00000476413 PRSS21Q9Y6M0 314 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms