RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 SGCZQ96LD1 299 aa27.29■■□□□ 1.96
HOXB3-208ENST00000476342 RABEP2Q9H5N1 569 aa27.29■■□□□ 1.96
HOXB3-208ENST00000476342 CXorf36Q9H7Y0 433 aa27.29■■□□□ 1.96
HOXB3-208ENST00000476342 BTNL2Q9UIR0 455 aa27.29■■□□□ 1.96
HOXB3-208ENST00000476342 NPFFR2Q9Y5X5 522 aa27.29■■□□□ 1.96
HOXB3-208ENST00000476342 FAM234BA2RU67 622 aa27.28■■□□□ 1.96
HOXB3-208ENST00000476342 TTC36A6NLP5 189 aa27.28■■□□□ 1.96
HOXB3-208ENST00000476342 SORBS2O94875 1100 aaKnown RBP27.28■■□□□ 1.96
HOXB3-208ENST00000476342 FBXO45P0C2W1 286 aa27.28■■□□□ 1.96
HOXB3-208ENST00000476342 CCT3P49368 545 aaKnown RBP27.28■■□□□ 1.96
HOXB3-208ENST00000476342 POLR2JP52435 117 aaKnown RBP27.28■■□□□ 1.96
HOXB3-208ENST00000476342 MAPKAPK3Q16644 382 aa27.28■■□□□ 1.96
HOXB3-208ENST00000476342 COLEC12Q5KU26 742 aa27.28■■□□□ 1.96
HOXB3-208ENST00000476342 RTL4Q6ZR62 310 aa27.28■■□□□ 1.96
HOXB3-208ENST00000476342 ANKRD46Q86W74 232 aa27.28■■□□□ 1.96
HOXB3-208ENST00000476342 OR56A1Q8NGH5 318 aa27.28■■□□□ 1.96
HOXB3-208ENST00000476342 SFXN5Q8TD22 340 aa27.28■■□□□ 1.96
HOXB3-208ENST00000476342 TIMMDC1Q9NPL8 285 aa27.28■■□□□ 1.96
HOXB3-208ENST00000476342 EQTNQ9NQ60 294 aa27.28■■□□□ 1.96
HOXB3-208ENST00000476342 PCDHGA10Q9Y5H3 936 aa27.28■■□□□ 1.96
HOXB3-208ENST00000476342 SUV39H1O43463 412 aa27.27■■□□□ 1.96
HOXB3-208ENST00000476342 NME6O75414 186 aaPredicted RBP27.27■■□□□ 1.96
HOXB3-208ENST00000476342 SP1P08047 785 aa27.27■■□□□ 1.96
HOXB3-208ENST00000476342 ABCD3P28288 659 aa27.27■■□□□ 1.96
HOXB3-208ENST00000476342 LSP1P33241 339 aa27.27■■□□□ 1.96
HOXB3-208ENST00000476342 SOAT1P35610 550 aa27.27■■□□□ 1.96
HOXB3-208ENST00000476342 VPS26BQ4G0F5 336 aa27.27■■□□□ 1.96
HOXB3-208ENST00000476342 SLC25A25Q6KCM7 469 aa27.27■■□□□ 1.96
HOXB3-208ENST00000476342 RPUSD3Q6P087 351 aaKnown RBP27.27■■□□□ 1.96
HOXB3-208ENST00000476342 BHLHB9Q6PI77 547 aa27.27■■□□□ 1.96
HOXB3-208ENST00000476342 LYPD8Q6UX82 237 aa27.27■■□□□ 1.96
HOXB3-208ENST00000476342 ZNF227Q86WZ6 799 aa27.27■■□□□ 1.96
HOXB3-208ENST00000476342 GOLM1Q8NBJ4 401 aa27.27■■□□□ 1.96
HOXB3-208ENST00000476342 SCMH1Q96GD3 660 aa27.27■■□□□ 1.96
HOXB3-208ENST00000476342 TMEM45AQ9NWC5 275 aa27.27■■□□□ 1.96
HOXB3-208ENST00000476342 SPENQ96T58 3664 aaKnown RBP27.27■■□□□ 1.96
HOXB3-208ENST00000476342 TO15178 435 aa27.26■■□□□ 1.95
HOXB3-208ENST00000476342 CPSF4O95639 269 aaKnown RBP27.26■■□□□ 1.95
HOXB3-208ENST00000476342 CT45A8P0DMV1 189 aa27.26■■□□□ 1.95
HOXB3-208ENST00000476342 CT45A9P0DMV2 189 aa27.26■■□□□ 1.95
HOXB3-208ENST00000476342 CORO7P57737 925 aa27.26■■□□□ 1.95
HOXB3-208ENST00000476342 PSG6Q00889 435 aa27.26■■□□□ 1.95
HOXB3-208ENST00000476342 INAQ16352 499 aa27.26■■□□□ 1.95
HOXB3-208ENST00000476342 ZNF791Q3KP31 576 aaPredicted RBP27.26■■□□□ 1.95
HOXB3-208ENST00000476342 CT45A2Q5DJT8 189 aa27.26■■□□□ 1.95
HOXB3-208ENST00000476342 ZCCHC12Q6PEW1 402 aa27.26■■□□□ 1.95
HOXB3-208ENST00000476342 CDRT4Q8N9R6 151 aa27.26■■□□□ 1.95
HOXB3-208ENST00000476342 CCDC115Q96NT0 180 aa27.26■■□□□ 1.95
HOXB3-208ENST00000476342 LMF2Q9BU23 707 aaKnown RBP27.26■■□□□ 1.95
HOXB3-208ENST00000476342 NSRP1Q9H0G5 558 aaKnown RBP27.26■■□□□ 1.95
HOXB3-208ENST00000476342 KLHL1Q9NR64 748 aa27.26■■□□□ 1.95
HOXB3-208ENST00000476342 MRGBPQ9NV56 204 aa27.26■■□□□ 1.95
HOXB3-208ENST00000476342 KLF13Q9Y2Y9 288 aaPredicted RBP27.26■■□□□ 1.95
HOXB3-208ENST00000476342 OR10H1Q9Y4A9 318 aa27.26■■□□□ 1.95
HOXB3-208ENST00000476342 GIMAP1-GIMAP5A0A087WTJ2 511 aa27.25■■□□□ 1.95
HOXB3-208ENST00000476342 NAGAP17050 411 aa27.25■■□□□ 1.95
HOXB3-208ENST00000476342 ZFP36L2P47974 494 aaKnown RBP27.25■■□□□ 1.95
HOXB3-208ENST00000476342 PRIM2P49643 509 aa27.25■■□□□ 1.95
HOXB3-208ENST00000476342 KCNK10P57789 538 aa27.25■■□□□ 1.95
HOXB3-208ENST00000476342 GNGT1P63211 74 aa27.25■■□□□ 1.95
HOXB3-208ENST00000476342 PLCXD2Q0VAA5 305 aa27.25■■□□□ 1.95
HOXB3-208ENST00000476342 C19orf57Q0VDD7 668 aa27.25■■□□□ 1.95
HOXB3-208ENST00000476342 SF3A3Q12874 501 aaKnown RBP eCLIP27.25■■□□□ 1.95
HOXB3-208ENST00000476342 TP53BP2Q13625 1128 aa27.25■■□□□ 1.95
HOXB3-208ENST00000476342 NTRK2Q16620 822 aa27.25■■□□□ 1.95
HOXB3-208ENST00000476342 NPSR1Q6W5P4 371 aa27.25■■□□□ 1.95
HOXB3-208ENST00000476342 MSANTD1Q6ZTZ1 278 aa27.25■■□□□ 1.95
HOXB3-208ENST00000476342 SLC44A2Q8IWA5 706 aaPredicted RBP27.25■■□□□ 1.95
HOXB3-208ENST00000476342 SLC34A3Q8N130 599 aa27.25■■□□□ 1.95
HOXB3-208ENST00000476342 PSD4Q8NDX1 1056 aa27.25■■□□□ 1.95
HOXB3-208ENST00000476342 GIMAP5Q96F15 307 aa27.25■■□□□ 1.95
HOXB3-208ENST00000476342 RMND5AQ9H871 391 aa27.25■■□□□ 1.95
HOXB3-208ENST00000476342 CCDC167Q9P0B6 97 aa27.25■■□□□ 1.95
HOXB3-208ENST00000476342 EXPH5Q8NEV8 1989 aa27.25■■□□□ 1.95
HOXB3-208ENST00000476342 TTLL8A6PVC2 850 aa27.24■■□□□ 1.95
HOXB3-208ENST00000476342 NME2P1O60361 137 aa27.24■■□□□ 1.95
HOXB3-208ENST00000476342 NME2P22392 152 aa27.24■■□□□ 1.95
HOXB3-208ENST00000476342 TIGD2Q4W5G0 525 aa27.24■■□□□ 1.95
HOXB3-208ENST00000476342 MDGA2Q7Z553 956 aa27.24■■□□□ 1.95
HOXB3-208ENST00000476342 PRR22Q8IZ63 422 aa27.24■■□□□ 1.95
HOXB3-208ENST00000476342 FAM98AQ8NCA5 519 aaKnown RBP27.24■■□□□ 1.95
HOXB3-208ENST00000476342 FAM13CQ8NE31 585 aa27.24■■□□□ 1.95
HOXB3-208ENST00000476342 OMA1Q96E52 524 aa27.24■■□□□ 1.95
HOXB3-208ENST00000476342 PANX1Q96RD7 426 aa27.24■■□□□ 1.95
HOXB3-208ENST00000476342 HES7Q9BYE0 225 aa27.24■■□□□ 1.95
HOXB3-208ENST00000476342 Q9N2J8 555 aa27.24■■□□□ 1.95
HOXB3-208ENST00000476342 CFAP46Q8IYW2 2715 aa27.24■■□□□ 1.95
HOXB3-208ENST00000476342 TP53I11O14683 189 aa27.24■■□□□ 1.95
HOXB3-208ENST00000476342 HMGN2P05204 90 aaKnown RBP27.24■■□□□ 1.95
HOXB3-208ENST00000476342 RCAN2Q14206 197 aa27.24■■□□□ 1.95
HOXB3-208ENST00000476342 MFSD12Q6NUT3 480 aa27.24■■□□□ 1.95
HOXB3-208ENST00000476342 GALNTL5Q7Z4T8 443 aa27.24■■□□□ 1.95
HOXB3-208ENST00000476342 TRIML2Q8N7C3 387 aa27.24■■□□□ 1.95
HOXB3-208ENST00000476342 OR5AK3PQ8NH89 298 aa27.24■■□□□ 1.95
HOXB3-208ENST00000476342 GOT1L1Q8NHS2 421 aaPredicted RBP27.24■■□□□ 1.95
HOXB3-208ENST00000476342 RNF103-CHMP3A0A140T963 221 aa27.23■■□□□ 1.95
HOXB3-208ENST00000476342 PPM1BO75688 479 aa27.23■■□□□ 1.95
HOXB3-208ENST00000476342 KRT20P35900 424 aa27.23■■□□□ 1.95
HOXB3-208ENST00000476342 SEC24CP53992 1094 aa27.23■■□□□ 1.95
HOXB3-208ENST00000476342 RPP38P78345 283 aaKnown RBP27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms