RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 AKAP7Q9P0M2 348 aaPredicted RBP12.81□□□□□ -0.36
TRAF4-210ENST00000475329 SEC14L3Q9UDX4 400 aa12.81□□□□□ -0.36
TRAF4-210ENST00000475329 ABCG2Q9UNQ0 655 aa12.81□□□□□ -0.36
TRAF4-210ENST00000475329 PADI2Q9Y2J8 665 aa12.81□□□□□ -0.36
TRAF4-210ENST00000475329 PCDHGB3Q9Y5G1 929 aa12.81□□□□□ -0.36
TRAF4-210ENST00000475329 KCNE3Q9Y6H6 103 aa12.81□□□□□ -0.36
TRAF4-210ENST00000475329 USP34Q70CQ2 3546 aa12.8□□□□□ -0.36
TRAF4-210ENST00000475329 SEC16AO15027 2179 aa12.8□□□□□ -0.36
TRAF4-210ENST00000475329 IGLV3-12A0A075B6K2 115 aa12.8□□□□□ -0.36
TRAF4-210ENST00000475329 OR2W5A6NFC9 320 aa12.8□□□□□ -0.36
TRAF4-210ENST00000475329 A8MVJ9 347 aa12.8□□□□□ -0.36
TRAF4-210ENST00000475329 H0YJX3 145 aa12.8□□□□□ -0.36
TRAF4-210ENST00000475329 POLR1CO15160 346 aaPredicted RBP12.8□□□□□ -0.36
TRAF4-210ENST00000475329 DYRK3O43781 588 aa12.8□□□□□ -0.36
TRAF4-210ENST00000475329 CPNE3O75131 537 aaKnown RBP12.8□□□□□ -0.36
TRAF4-210ENST00000475329 NME6O75414 186 aaPredicted RBP12.8□□□□□ -0.36
TRAF4-210ENST00000475329 RFPL3O75679 317 aa12.8□□□□□ -0.36
TRAF4-210ENST00000475329 H6PDO95479 791 aa12.8□□□□□ -0.36
TRAF4-210ENST00000475329 AK1P00568 194 aa12.8□□□□□ -0.36
TRAF4-210ENST00000475329 TNNI3P19429 210 aa12.8□□□□□ -0.36
TRAF4-210ENST00000475329 ATP6V1C1P21283 382 aa12.8□□□□□ -0.36
TRAF4-210ENST00000475329 S1PR1P21453 382 aa12.8□□□□□ -0.36
TRAF4-210ENST00000475329 PGDP52209 483 aa12.8□□□□□ -0.36
TRAF4-210ENST00000475329 DCDP81605 110 aaKnown RBP12.8□□□□□ -0.36
TRAF4-210ENST00000475329 E2F1Q01094 437 aa12.8□□□□□ -0.36
TRAF4-210ENST00000475329 MC2RQ01718 297 aa12.8□□□□□ -0.36
TRAF4-210ENST00000475329 OCA2Q04671 838 aa12.8□□□□□ -0.36
TRAF4-210ENST00000475329 TCF15Q12870 199 aa12.8□□□□□ -0.36
TRAF4-210ENST00000475329 DUSP8Q13202 625 aa12.8□□□□□ -0.36
TRAF4-210ENST00000475329 ZNF267Q14586 743 aaPredicted RBP12.8□□□□□ -0.36
TRAF4-210ENST00000475329 ZNHIT3Q15649 155 aaPredicted RBP12.8□□□□□ -0.36
TRAF4-210ENST00000475329 ARHGAP11BQ3KRB8 267 aa12.8□□□□□ -0.36
TRAF4-210ENST00000475329 NKAIN1Q4KMZ8 207 aa12.8□□□□□ -0.36
TRAF4-210ENST00000475329 VWA2Q5GFL6 755 aa12.8□□□□□ -0.36
TRAF4-210ENST00000475329 WLSQ5T9L3 541 aa12.8□□□□□ -0.36
TRAF4-210ENST00000475329 OR2T5Q6IEZ7 315 aa12.8□□□□□ -0.36
TRAF4-210ENST00000475329 PPP4R4Q6NUP7 873 aa12.8□□□□□ -0.36
TRAF4-210ENST00000475329 SVOPLQ8N434 492 aa12.8□□□□□ -0.36
TRAF4-210ENST00000475329 COX18Q8N8Q8 333 aa12.8□□□□□ -0.36
TRAF4-210ENST00000475329 SMYD1Q8NB12 490 aa12.8□□□□□ -0.36
TRAF4-210ENST00000475329 OR2T29Q8NH02 315 aa12.8□□□□□ -0.36
TRAF4-210ENST00000475329 PROX1Q92786 737 aa12.8□□□□□ -0.36
TRAF4-210ENST00000475329 HOXB13Q92826 284 aaPredicted RBP12.8□□□□□ -0.36
TRAF4-210ENST00000475329 TSLPQ969D9 159 aa12.8□□□□□ -0.36
TRAF4-210ENST00000475329 SDCCAG3Q96C92 435 aa12.8□□□□□ -0.36
TRAF4-210ENST00000475329 C7orf34Q96L11 122 aa12.8□□□□□ -0.36
TRAF4-210ENST00000475329 BTBD9Q96Q07 612 aa12.8□□□□□ -0.36
TRAF4-210ENST00000475329 STRADBQ9C0K7 418 aa12.8□□□□□ -0.36
TRAF4-210ENST00000475329 SLC38A1Q9H2H9 487 aa12.8□□□□□ -0.36
TRAF4-210ENST00000475329 TRIM45Q9H8W5 580 aaPredicted RBP12.8□□□□□ -0.36
TRAF4-210ENST00000475329 CACYBPQ9HB71 228 aaKnown RBP12.8□□□□□ -0.36
TRAF4-210ENST00000475329 FOLH1BQ9HBA9 442 aa12.8□□□□□ -0.36
TRAF4-210ENST00000475329 APMAPQ9HDC9 416 aa12.8□□□□□ -0.36
TRAF4-210ENST00000475329 THSD1Q9NS62 852 aa12.8□□□□□ -0.36
TRAF4-210ENST00000475329 CTSFQ9UBX1 484 aa12.8□□□□□ -0.36
TRAF4-210ENST00000475329 SATB2Q9UPW6 733 aa12.8□□□□□ -0.36
TRAF4-210ENST00000475329 ERVK-19Q9WJR5 959 aa12.8□□□□□ -0.36
TRAF4-210ENST00000475329 HEMK1Q9Y5R4 338 aaPredicted RBP12.8□□□□□ -0.36
TRAF4-210ENST00000475329 TCRBV16S1A1N1A0A5B0 115 aa12.79□□□□□ -0.36
TRAF4-210ENST00000475329 C4orf47A7E2U8 309 aa12.79□□□□□ -0.36
TRAF4-210ENST00000475329 C17orf105B2RV13 164 aa12.79□□□□□ -0.36
TRAF4-210ENST00000475329 TMX2-CTNND1H3BSU7 103 aa12.79□□□□□ -0.36
TRAF4-210ENST00000475329 SOCS2O14508 198 aa12.79□□□□□ -0.36
TRAF4-210ENST00000475329 E2F6O75461 281 aa12.79□□□□□ -0.36
TRAF4-210ENST00000475329 RASAL1O95294 804 aa12.79□□□□□ -0.36
TRAF4-210ENST00000475329 ONECUT2O95948 504 aa12.79□□□□□ -0.36
TRAF4-210ENST00000475329 ALPPP05187 535 aa12.79□□□□□ -0.36
TRAF4-210ENST00000475329 ZNF26P17031 533 aaPredicted RBP12.79□□□□□ -0.36
TRAF4-210ENST00000475329 ITGA2P17301 1181 aa12.79□□□□□ -0.36
TRAF4-210ENST00000475329 SSTR4P31391 388 aa12.79□□□□□ -0.36
TRAF4-210ENST00000475329 RORAP35398 523 aa12.79□□□□□ -0.36
TRAF4-210ENST00000475329 MAP3K8P41279 467 aa12.79□□□□□ -0.36
TRAF4-210ENST00000475329 POU6F2P78424 691 aaPredicted RBP12.79□□□□□ -0.36
TRAF4-210ENST00000475329 KCNC4Q03721 635 aa12.79□□□□□ -0.36
TRAF4-210ENST00000475329 FUT7Q11130 342 aa12.79□□□□□ -0.36
TRAF4-210ENST00000475329 ELAVL1Q15717 326 aaKnown RBP12.79□□□□□ -0.36
TRAF4-210ENST00000475329 CCDC157Q569K6 752 aa12.79□□□□□ -0.36
TRAF4-210ENST00000475329 MLIPQ5VWP3 458 aa12.79□□□□□ -0.36
TRAF4-210ENST00000475329 ZNF385CQ66K41 422 aaPredicted RBP12.79□□□□□ -0.36
TRAF4-210ENST00000475329 PRSS58Q8IYP2 241 aa12.79□□□□□ -0.36
TRAF4-210ENST00000475329 CBR4Q8N4T8 237 aa12.79□□□□□ -0.36
TRAF4-210ENST00000475329 SLC38A9Q8NBW4 561 aa12.79□□□□□ -0.36
TRAF4-210ENST00000475329 CHDHQ8NE62 594 aaPredicted RBP12.79□□□□□ -0.36
TRAF4-210ENST00000475329 OR7G1Q8NGA0 311 aa12.79□□□□□ -0.36
TRAF4-210ENST00000475329 OR5K1Q8NHB7 308 aa12.79□□□□□ -0.36
TRAF4-210ENST00000475329 RNF31Q96EP0 1072 aa12.79□□□□□ -0.36
TRAF4-210ENST00000475329 ZNF347Q96SE7 839 aa12.79□□□□□ -0.36
TRAF4-210ENST00000475329 CTRCQ99895 268 aa12.79□□□□□ -0.36
TRAF4-210ENST00000475329 LMF2Q9BU23 707 aaKnown RBP12.79□□□□□ -0.36
TRAF4-210ENST00000475329 VN1R1Q9GZP7 353 aa12.79□□□□□ -0.36
TRAF4-210ENST00000475329 FBXO8Q9NRD0 319 aa12.79□□□□□ -0.36
TRAF4-210ENST00000475329 PNO1Q9NRX1 252 aaKnown RBP12.79□□□□□ -0.36
TRAF4-210ENST00000475329 SLC22A11Q9NSA0 550 aa12.79□□□□□ -0.36
TRAF4-210ENST00000475329 PCDHGA8Q9Y5G5 932 aa12.79□□□□□ -0.36
TRAF4-210ENST00000475329 DSPPQ9NZW4 1301 aa12.79□□□□□ -0.36
TRAF4-210ENST00000475329 MUC6Q6W4X9 2439 aa12.79□□□□□ -0.36
TRAF4-210ENST00000475329 GPR179Q6PRD1 2367 aa12.78□□□□□ -0.36
TRAF4-210ENST00000475329 TTC36A6NLP5 189 aa12.78□□□□□ -0.36
TRAF4-210ENST00000475329 B4E171 279 aa12.78□□□□□ -0.36
TRAF4-210ENST00000475329 PDLIM1O00151 329 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms