RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 LCORQ96JN0 433 aaPredicted RBP12.71□□□□□ -0.37
CCDC78-209ENST00000474647 COX4I2Q96KJ9 171 aa12.71□□□□□ -0.37
CCDC78-209ENST00000474647 FAM111AQ96PZ2 611 aa12.71□□□□□ -0.37
CCDC78-209ENST00000474647 SERPINI1Q99574 410 aa12.71□□□□□ -0.37
CCDC78-209ENST00000474647 CCL19Q99731 98 aa12.71□□□□□ -0.37
CCDC78-209ENST00000474647 RHOXF2Q9BQY4 288 aa12.71□□□□□ -0.37
CCDC78-209ENST00000474647 MRPL1Q9BYD6 325 aaKnown RBP12.71□□□□□ -0.37
CCDC78-209ENST00000474647 OR2B2Q9GZK3 357 aa12.71□□□□□ -0.37
CCDC78-209ENST00000474647 KLHL28Q9NXS3 571 aa12.71□□□□□ -0.37
CCDC78-209ENST00000474647 CLCF1Q9UBD9 225 aa12.71□□□□□ -0.37
CCDC78-209ENST00000474647 FETUBQ9UGM5 382 aa12.71□□□□□ -0.37
CCDC78-209ENST00000474647 DKKL1Q9UK85 242 aa12.71□□□□□ -0.37
CCDC78-209ENST00000474647 CFL2Q9Y281 166 aa12.71□□□□□ -0.37
CCDC78-209ENST00000474647 A0A087X1B8 175 aa12.7□□□□□ -0.38
CCDC78-209ENST00000474647 KIAA1324LA8MWY0 1029 aaPredicted RBP12.7□□□□□ -0.38
CCDC78-209ENST00000474647 FOXE1O00358 373 aaPredicted RBP12.7□□□□□ -0.38
CCDC78-209ENST00000474647 PLOD2O00469 737 aa12.7□□□□□ -0.38
CCDC78-209ENST00000474647 EIF3HO15372 352 aaKnown RBP eCLIP12.7□□□□□ -0.38
CCDC78-209ENST00000474647 UGT2B11O75310 529 aa12.7□□□□□ -0.38
CCDC78-209ENST00000474647 CBR3O75828 277 aa12.7□□□□□ -0.38
CCDC78-209ENST00000474647 SEMA3DO95025 777 aa12.7□□□□□ -0.38
CCDC78-209ENST00000474647 CLDN9O95484 217 aa12.7□□□□□ -0.38
CCDC78-209ENST00000474647 GSTA2P09210 222 aa12.7□□□□□ -0.38
CCDC78-209ENST00000474647 FEN1P39748 380 aaKnown RBP12.7□□□□□ -0.38
CCDC78-209ENST00000474647 CAV1Q03135 178 aa12.7□□□□□ -0.38
CCDC78-209ENST00000474647 FAM83EQ2M2I3 478 aa12.7□□□□□ -0.38
CCDC78-209ENST00000474647 TMEM81Q6P7N7 255 aa12.7□□□□□ -0.38
CCDC78-209ENST00000474647 AAGABQ6PD74 315 aa12.7□□□□□ -0.38
CCDC78-209ENST00000474647 SCIMPQ6UWF3 145 aa12.7□□□□□ -0.38
CCDC78-209ENST00000474647 ZDHHC24Q6UX98 284 aa12.7□□□□□ -0.38
CCDC78-209ENST00000474647 CENPLQ8N0S6 344 aaPredicted RBP12.7□□□□□ -0.38
CCDC78-209ENST00000474647 CNEP1R1Q8N9A8 125 aa12.7□□□□□ -0.38
CCDC78-209ENST00000474647 SIMC1Q8NDZ2 872 aa12.7□□□□□ -0.38
CCDC78-209ENST00000474647 RHEBL1Q8TAI7 183 aa12.7□□□□□ -0.38
CCDC78-209ENST00000474647 FBF1Q8TES7 1133 aa12.7□□□□□ -0.38
CCDC78-209ENST00000474647 PIGTQ969N2 578 aa12.7□□□□□ -0.38
CCDC78-209ENST00000474647 KLHL29Q96CT2 875 aa12.7□□□□□ -0.38
CCDC78-209ENST00000474647 NTNG2Q96CW9 530 aa12.7□□□□□ -0.38
CCDC78-209ENST00000474647 MRRFQ96E11 262 aaKnown RBP12.7□□□□□ -0.38
CCDC78-209ENST00000474647 SFXN2Q96NB2 322 aa12.7□□□□□ -0.38
CCDC78-209ENST00000474647 MED18Q9BUE0 208 aa12.7□□□□□ -0.38
CCDC78-209ENST00000474647 G6PC3Q9BUM1 346 aa12.7□□□□□ -0.38
CCDC78-209ENST00000474647 NOL11Q9H8H0 719 aaKnown RBP12.7□□□□□ -0.38
CCDC78-209ENST00000474647 TAS2R10Q9NYW0 307 aa12.7□□□□□ -0.38
CCDC78-209ENST00000474647 EXO1Q9UQ84 846 aaKnown RBP12.7□□□□□ -0.38
CCDC78-209ENST00000474647 PLLPQ9Y342 182 aa12.7□□□□□ -0.38
CCDC78-209ENST00000474647 HIVEP2P31629 2446 aa12.7□□□□□ -0.38
CCDC78-209ENST00000474647 CR1P17927 2039 aa12.69□□□□□ -0.38
CCDC78-209ENST00000474647 A0A1W2PNV4 684 aa12.69□□□□□ -0.38
CCDC78-209ENST00000474647 A8MXE2 369 aa12.69□□□□□ -0.38
CCDC78-209ENST00000474647 ACOX3O15254 700 aa12.69□□□□□ -0.38
CCDC78-209ENST00000474647 NAGAP17050 411 aa12.69□□□□□ -0.38
CCDC78-209ENST00000474647 S1PR1P21453 382 aa12.69□□□□□ -0.38
CCDC78-209ENST00000474647 STX2P32856 288 aa12.69□□□□□ -0.38
CCDC78-209ENST00000474647 LHX2P50458 406 aa12.69□□□□□ -0.38
CCDC78-209ENST00000474647 CCNG1P51959 295 aa12.69□□□□□ -0.38
CCDC78-209ENST00000474647 MAPK12P53778 367 aa12.69□□□□□ -0.38
CCDC78-209ENST00000474647 PPP2R2BQ00005 443 aa12.69□□□□□ -0.38
CCDC78-209ENST00000474647 FAM27E3Q08E93 113 aa12.69□□□□□ -0.38
CCDC78-209ENST00000474647 CBLBQ13191 982 aa12.69□□□□□ -0.38
CCDC78-209ENST00000474647 SNTA1Q13424 505 aa12.69□□□□□ -0.38
CCDC78-209ENST00000474647 GAB1Q13480 694 aa12.69□□□□□ -0.38
CCDC78-209ENST00000474647 TRADDQ15628 312 aa12.69□□□□□ -0.38
CCDC78-209ENST00000474647 PRICKLE4Q2TBC4 344 aa12.69□□□□□ -0.38
CCDC78-209ENST00000474647 MROH9Q5TGP6 573 aa12.69□□□□□ -0.38
CCDC78-209ENST00000474647 FAM180BQ6P0A1 224 aa12.69□□□□□ -0.38
CCDC78-209ENST00000474647 KLC3Q6P597 504 aa12.69□□□□□ -0.38
CCDC78-209ENST00000474647 CYS1Q717R9 158 aa12.69□□□□□ -0.38
CCDC78-209ENST00000474647 PAGE2Q7Z2X7 111 aa12.69□□□□□ -0.38
CCDC78-209ENST00000474647 YTHDF3Q7Z739 585 aaKnown RBP12.69□□□□□ -0.38
CCDC78-209ENST00000474647 ADGRE4PQ86SQ3 457 aa12.69□□□□□ -0.38
CCDC78-209ENST00000474647 LRRC75A-AS1Q8N1F1 130 aa12.69□□□□□ -0.38
CCDC78-209ENST00000474647 WDSUB1Q8N9V3 476 aa12.69□□□□□ -0.38
CCDC78-209ENST00000474647 L3MBTL4Q8NA19 623 aa12.69□□□□□ -0.38
CCDC78-209ENST00000474647 OR52B6Q8NGF0 335 aa12.69□□□□□ -0.38
CCDC78-209ENST00000474647 OR52R1Q8NGF1 315 aa12.69□□□□□ -0.38
CCDC78-209ENST00000474647 MDFIQ99750 246 aa12.69□□□□□ -0.38
CCDC78-209ENST00000474647 BDH2Q9BUT1 245 aa12.69□□□□□ -0.38
CCDC78-209ENST00000474647 ANKZF1Q9H8Y5 726 aa12.69□□□□□ -0.38
CCDC78-209ENST00000474647 ZNF226Q9NYT6 803 aa12.69□□□□□ -0.38
CCDC78-209ENST00000474647 AHSPQ9NZD4 102 aa12.69□□□□□ -0.38
CCDC78-209ENST00000474647 MAT2BQ9NZL9 334 aa12.69□□□□□ -0.38
CCDC78-209ENST00000474647 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.68□□□□□ -0.38
CCDC78-209ENST00000474647 C1orf226A1L170 272 aa12.68□□□□□ -0.38
CCDC78-209ENST00000474647 TRIM64A6NGJ6 449 aa12.68□□□□□ -0.38
CCDC78-209ENST00000474647 TRIM64BA6NI03 449 aa12.68□□□□□ -0.38
CCDC78-209ENST00000474647 OR7A17O14581 309 aa12.68□□□□□ -0.38
CCDC78-209ENST00000474647 SIAH2O43255 324 aa12.68□□□□□ -0.38
CCDC78-209ENST00000474647 CTIFO43310 598 aaKnown RBP12.68□□□□□ -0.38
CCDC78-209ENST00000474647 TNFSF13O75888 250 aa12.68□□□□□ -0.38
CCDC78-209ENST00000474647 TGM6O95932 706 aa12.68□□□□□ -0.38
CCDC78-209ENST00000474647 C2P06681 752 aa12.68□□□□□ -0.38
CCDC78-209ENST00000474647 CHMP24386 653 aa12.68□□□□□ -0.38
CCDC78-209ENST00000474647 ECHS1P30084 290 aa12.68□□□□□ -0.38
CCDC78-209ENST00000474647 KCNJ5P48544 419 aa12.68□□□□□ -0.38
CCDC78-209ENST00000474647 ALDH9A1P49189 494 aa12.68□□□□□ -0.38
CCDC78-209ENST00000474647 GFRA1P56159 465 aa12.68□□□□□ -0.38
CCDC78-209ENST00000474647 CLDN18P56856 261 aa12.68□□□□□ -0.38
CCDC78-209ENST00000474647 SIRPAP78324 504 aa12.68□□□□□ -0.38
CCDC78-209ENST00000474647 MRPS35P82673 323 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms