RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 WBP4O75554 376 aaKnown RBP20.37■□□□□ 0.85
CCM2-206ENST00000474617 GASTP01350 101 aa20.37■□□□□ 0.85
CCM2-206ENST00000474617 ALOX5P09917 674 aa20.37■□□□□ 0.85
CCM2-206ENST00000474617 ALPPL2P10696 532 aa20.37■□□□□ 0.85
CCM2-206ENST00000474617 RNH1P13489 461 aaKnown RBP20.37■□□□□ 0.85
CCM2-206ENST00000474617 TYRP1P17643 537 aa20.37■□□□□ 0.85
CCM2-206ENST00000474617 KRT20P35900 424 aa20.37■□□□□ 0.85
CCM2-206ENST00000474617 LTB4RQ15722 352 aa20.37■□□□□ 0.85
CCM2-206ENST00000474617 INAVAQ3KP66 663 aa20.37■□□□□ 0.85
CCM2-206ENST00000474617 CYP27C1Q4G0S4 372 aa20.37■□□□□ 0.85
CCM2-206ENST00000474617 CCDC71Q8IV32 467 aaPredicted RBP20.37■□□□□ 0.85
CCM2-206ENST00000474617 ZNF595Q8IYB9 648 aa20.37■□□□□ 0.85
CCM2-206ENST00000474617 COL26A1Q96A83 441 aa20.37■□□□□ 0.85
CCM2-206ENST00000474617 Q96MT0 163 aa20.37■□□□□ 0.85
CCM2-206ENST00000474617 YIPF4Q9BSR8 244 aa20.37■□□□□ 0.85
CCM2-206ENST00000474617 ERVMER34-1Q9H9K5 563 aa20.37■□□□□ 0.85
CCM2-206ENST00000474617 FTSJ1Q9UET6 329 aa20.37■□□□□ 0.85
CCM2-206ENST00000474617 CLCA2Q9UQC9 943 aa20.37■□□□□ 0.85
CCM2-206ENST00000474617 CSNK1G3Q9Y6M4 447 aa20.37■□□□□ 0.85
CCM2-206ENST00000474617 GOLGA4Q13439 2230 aaKnown RBP20.37■□□□□ 0.85
CCM2-206ENST00000474617 TRBV4-1A0A0J9YWV2 114 aa20.37■□□□□ 0.85
CCM2-206ENST00000474617 EPHA2P29317 976 aa20.37■□□□□ 0.85
CCM2-206ENST00000474617 FMO3P31513 532 aa20.37■□□□□ 0.85
CCM2-206ENST00000474617 MAZP56270 477 aaKnown RBP20.37■□□□□ 0.85
CCM2-206ENST00000474617 DUSP8Q13202 625 aa20.37■□□□□ 0.85
CCM2-206ENST00000474617 ZSWIM7Q19AV6 140 aa20.37■□□□□ 0.85
CCM2-206ENST00000474617 C14orf28Q4W4Y0 310 aa20.37■□□□□ 0.85
CCM2-206ENST00000474617 GPR107Q5VW38 600 aa20.37■□□□□ 0.85
CCM2-206ENST00000474617 KLHL17Q6TDP4 642 aa20.37■□□□□ 0.85
CCM2-206ENST00000474617 MAMSTRQ6ZN01 415 aa20.37■□□□□ 0.85
CCM2-206ENST00000474617 SIX5Q8N196 739 aa20.37■□□□□ 0.85
CCM2-206ENST00000474617 FRMD1Q8N878 549 aa20.37■□□□□ 0.85
CCM2-206ENST00000474617 OR6C4Q8NGE1 309 aa20.37■□□□□ 0.85
CCM2-206ENST00000474617 VANGL1Q8TAA9 524 aaPredicted RBP20.37■□□□□ 0.85
CCM2-206ENST00000474617 C1orf216Q8TAB5 229 aa20.37■□□□□ 0.85
CCM2-206ENST00000474617 SLC38A4Q969I6 547 aa20.37■□□□□ 0.85
CCM2-206ENST00000474617 SLC35A4Q96G79 324 aa20.37■□□□□ 0.85
CCM2-206ENST00000474617 FOXQ1Q9C009 403 aa20.37■□□□□ 0.85
CCM2-206ENST00000474617 CCDC90BQ9GZT6 254 aa20.37■□□□□ 0.85
CCM2-206ENST00000474617 SAP130Q9H0E3 1048 aa20.37■□□□□ 0.85
CCM2-206ENST00000474617 KLHL25Q9H0H3 589 aa20.37■□□□□ 0.85
CCM2-206ENST00000474617 EQTNQ9NQ60 294 aa20.37■□□□□ 0.85
CCM2-206ENST00000474617 PAK1IP1Q9NWT1 392 aaPredicted RBP20.37■□□□□ 0.85
CCM2-206ENST00000474617 CCDC88CQ9P219 2028 aa20.36■□□□□ 0.85
CCM2-206ENST00000474617 H3BMQ9 156 aa20.36■□□□□ 0.85
CCM2-206ENST00000474617 XPNPEP2O43895 674 aa20.36■□□□□ 0.85
CCM2-206ENST00000474617 NSA2O95478 260 aaKnown RBP20.36■□□□□ 0.85
CCM2-206ENST00000474617 CCNA2P20248 432 aa20.36■□□□□ 0.85
CCM2-206ENST00000474617 C21orf59P57076 290 aa20.36■□□□□ 0.85
CCM2-206ENST00000474617 SHC2P98077 582 aa20.36■□□□□ 0.85
CCM2-206ENST00000474617 ST3GAL3Q11203 375 aa20.36■□□□□ 0.85
CCM2-206ENST00000474617 MAP4K2Q12851 820 aa20.36■□□□□ 0.85
CCM2-206ENST00000474617 TRAM2Q15035 370 aa20.36■□□□□ 0.85
CCM2-206ENST00000474617 PTGES3Q15185 160 aaKnown RBP20.36■□□□□ 0.85
CCM2-206ENST00000474617 SYT6Q5T7P8 510 aaPredicted RBP20.36■□□□□ 0.85
CCM2-206ENST00000474617 FAM111BQ6SJ93 734 aa20.36■□□□□ 0.85
CCM2-206ENST00000474617 OR52P1PQ8NH57 321 aa20.36■□□□□ 0.85
CCM2-206ENST00000474617 APH1BQ8WW43 257 aa20.36■□□□□ 0.85
CCM2-206ENST00000474617 HOXB13Q92826 284 aaPredicted RBP20.36■□□□□ 0.85
CCM2-206ENST00000474617 CTHRC1Q96CG8 243 aa20.36■□□□□ 0.85
CCM2-206ENST00000474617 COG8Q96MW5 612 aa20.36■□□□□ 0.85
CCM2-206ENST00000474617 SIGLEC11Q96RL6 698 aa20.36■□□□□ 0.85
CCM2-206ENST00000474617 PELOQ9BRX2 385 aaKnown RBP20.36■□□□□ 0.85
CCM2-206ENST00000474617 LHPPQ9H008 270 aa20.36■□□□□ 0.85
CCM2-206ENST00000474617 DUSP15Q9H1R2 295 aaPredicted RBP20.36■□□□□ 0.85
CCM2-206ENST00000474617 TBC1D17Q9HA65 648 aa20.36■□□□□ 0.85
CCM2-206ENST00000474617 FKBP14Q9NWM8 211 aa20.36■□□□□ 0.85
CCM2-206ENST00000474617 CNOT2Q9NZN8 540 aaKnown RBP20.36■□□□□ 0.85
CCM2-206ENST00000474617 PSORS1C1Q9UIG5 152 aa20.36■□□□□ 0.85
CCM2-206ENST00000474617 WDR45Q9Y484 360 aa20.36■□□□□ 0.85
CCM2-206ENST00000474617 PCDHGA10Q9Y5H3 936 aa20.36■□□□□ 0.85
CCM2-206ENST00000474617 EFCAB10A6NFE3 127 aa20.35■□□□□ 0.85
CCM2-206ENST00000474617 SLC9B1P1A6NJY1 282 aa20.35■□□□□ 0.85
CCM2-206ENST00000474617 CLCA1A8K7I4 914 aa20.35■□□□□ 0.85
CCM2-206ENST00000474617 FGF17O60258 216 aa20.35■□□□□ 0.85
CCM2-206ENST00000474617 NME6O75414 186 aaPredicted RBP20.35■□□□□ 0.85
CCM2-206ENST00000474617 STX11O75558 287 aa20.35■□□□□ 0.85
CCM2-206ENST00000474617 DBIP07108 87 aaKnown RBP20.35■□□□□ 0.85
CCM2-206ENST00000474617 GABRB1P18505 474 aa20.35■□□□□ 0.85
CCM2-206ENST00000474617 CHMP24386 653 aa20.35■□□□□ 0.85
CCM2-206ENST00000474617 CTSKP43235 329 aa20.35■□□□□ 0.85
CCM2-206ENST00000474617 CXCL12P48061 93 aa20.35■□□□□ 0.85
CCM2-206ENST00000474617 ST13P50502 369 aaKnown RBP20.35■□□□□ 0.85
CCM2-206ENST00000474617 AFF3P51826 1226 aaKnown RBP20.35■□□□□ 0.85
CCM2-206ENST00000474617 SNRPGP62308 76 aaKnown RBP20.35■□□□□ 0.85
CCM2-206ENST00000474617 EMX1Q04741 257 aaPredicted RBP20.35■□□□□ 0.85
CCM2-206ENST00000474617 CHRNEQ04844 493 aa20.35■□□□□ 0.85
CCM2-206ENST00000474617 PRICKLE4Q2TBC4 344 aa20.35■□□□□ 0.85
CCM2-206ENST00000474617 C6orf132Q5T0Z8 1188 aa20.35■□□□□ 0.85
CCM2-206ENST00000474617 SLX4IPQ5VYV7 408 aa20.35■□□□□ 0.85
CCM2-206ENST00000474617 PGBD2Q6P3X8 592 aa20.35■□□□□ 0.85
CCM2-206ENST00000474617 ANKRD13BQ86YJ7 626 aa20.35■□□□□ 0.85
CCM2-206ENST00000474617 OR6T1Q8NGN1 323 aa20.35■□□□□ 0.85
CCM2-206ENST00000474617 C9orf43Q8TAL5 461 aaPredicted RBP20.35■□□□□ 0.85
CCM2-206ENST00000474617 SLC7A13Q8TCU3 470 aa20.35■□□□□ 0.85
CCM2-206ENST00000474617 GTPBP3Q969Y2 492 aaKnown RBP20.35■□□□□ 0.85
CCM2-206ENST00000474617 HSPA12BQ96MM6 686 aa20.35■□□□□ 0.85
CCM2-206ENST00000474617 ZNF350Q9GZX5 532 aa20.35■□□□□ 0.85
CCM2-206ENST00000474617 KRCC1Q9NPI7 259 aaPredicted RBP20.35■□□□□ 0.85
CCM2-206ENST00000474617 CLN6Q9NWW5 311 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms