RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 SIAH3Q8IW03 269 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 EFCAB13Q8IY85 973 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 KLHDC8AQ8IYD2 350 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 FBXL14Q8N1E6 418 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 CPSF7Q8N684 471 aaKnown RBP2.12□□□□□ -2.07
CALD1-216ENST00000473714 MAB21L3Q8N8X9 362 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 NRACQ8N912 160 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 SMYD1Q8NB12 490 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 CLEC1AQ8NC01 280 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 ST6GALNAC3Q8NDV1 305 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 OR11H4Q8NGC9 324 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 OR4C15Q8NGM1 316 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 OR1J1Q8NGS3 322 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 OR13C3Q8NGS6 347 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 OR4C6Q8NH72 309 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 FCGR1BQ92637 280 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 RFT1Q96AA3 541 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 TMEM143Q96AN5 459 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 ZMYND19Q96E35 227 aaPredicted RBP2.12□□□□□ -2.07
CALD1-216ENST00000473714 ADGRG7Q96K78 797 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 SGK494Q96LW2 274 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 SPATA13Q96N96 652 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 ZNF385AQ96PM9 386 aaKnown RBP2.12□□□□□ -2.07
CALD1-216ENST00000473714 MYCBPQ99417 103 aaPredicted RBP2.12□□□□□ -2.07
CALD1-216ENST00000473714 GABRG3Q99928 467 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 PKP2Q99959 881 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 UBAC1Q9BSL1 405 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 GCOM2Q9BZD3 368 aaPredicted RBP2.12□□□□□ -2.07
CALD1-216ENST00000473714 TM6SF1Q9BZW5 370 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 VN1R1Q9GZP7 353 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 NACA2Q9H009 215 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 RAB17Q9H0T7 212 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 SDCBP2Q9H190 292 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 DPEP2Q9H4A9 486 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 C10orf88Q9H8K7 445 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 APOBEC3GQ9HC16 384 aaKnown RBP2.12□□□□□ -2.07
CALD1-216ENST00000473714 Q9N2K0 584 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 TCF7L2Q9NQB0 619 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 GDF3Q9NR23 364 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 AGPAT5Q9NUQ2 364 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 DNAJC11Q9NVH1 559 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 ASF1BQ9NVP2 202 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 NINJ2Q9NZG7 142 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 GPR132Q9UNW8 380 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 KCNJ14Q9UNX9 436 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 TNNQ9UQP3 1299 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 WDR83OSQ9Y284 106 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 NSG2Q9Y328 171 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 ASB3Q9Y575 518 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 U3KQA8 63 aa2.12□□□□□ -2.07
CALD1-216ENST00000473714 NCOA6Q14686 2063 aaPredicted RBP2.12□□□□□ -2.07
CALD1-216ENST00000473714 TENM1Q9UKZ4 2725 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 TRAV18A0A075B6X5 111 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 SAA2-SAA4A0A096LPE2 208 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 IGLV5-52A0A0A0MRZ9 124 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 A0A0B4J203 849 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 MAGEB16A2A368 324 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 RGSL1A5PLK6 1076 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.11□□□□□ -2.07
CALD1-216ENST00000473714 E9PI62 339 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 F8VVB4 439 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 F8VWA3 439 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 NPIPA3F8WFD2 350 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 TMX2-CTNND1H3BSU7 103 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 EPHB6O15197 1021 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 RNF113AO15541 343 aaKnown RBP2.11□□□□□ -2.07
CALD1-216ENST00000473714 SDC3O75056 442 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 NME6O75414 186 aaPredicted RBP2.11□□□□□ -2.07
CALD1-216ENST00000473714 LRCH4O75427 683 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 PRKRAO75569 313 aaKnown RBP2.11□□□□□ -2.07
CALD1-216ENST00000473714 PDE9AO76083 593 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 LETM1O95202 739 aaPredicted RBP2.11□□□□□ -2.07
CALD1-216ENST00000473714 PMS2P2O95744 297 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 WDPCPO95876 746 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 IFNB1P01574 187 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 NR3C1P04150 777 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 HEXBP07686 556 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 ABHD2P08910 425 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 ACAA1P09110 424 aaPredicted RBP2.11□□□□□ -2.07
CALD1-216ENST00000473714 POLR2MP0CAP2 368 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 GIMD1P0DJR0 217 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 TOP1P11387 765 aaKnown RBP2.11□□□□□ -2.07
CALD1-216ENST00000473714 CDH1P12830 882 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 ITGA2P17301 1181 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 GM2AP17900 193 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 UGT1A6P19224 532 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 LHCGRP22888 699 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 AHCYP23526 432 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 ALDH4A1P30038 563 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 HOXA11P31270 313 aaPredicted RBP2.11□□□□□ -2.07
CALD1-216ENST00000473714 TIA1P31483 386 aaKnown RBP eCLIP2.11□□□□□ -2.07
CALD1-216ENST00000473714 SPAM1P38567 509 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 ETV5P41161 510 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 NSFP46459 744 aaKnown RBP2.11□□□□□ -2.07
CALD1-216ENST00000473714 ASMTP46597 345 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 BRCC3P46736 316 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 FMO5P49326 533 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 HNRNPFP52597 415 aaKnown RBP2.11□□□□□ -2.07
CALD1-216ENST00000473714 ZNF132P52740 706 aa2.11□□□□□ -2.07
CALD1-216ENST00000473714 HSD17B7P56937 341 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms