RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 CT45A8P0DMV1 189 aa17.53■□□□□ 0.4
CTDSP1-207ENST00000473420 CT45A9P0DMV2 189 aa17.53■□□□□ 0.4
CTDSP1-207ENST00000473420 NAGAP17050 411 aa17.53■□□□□ 0.4
CTDSP1-207ENST00000473420 UQCRC2P22695 453 aa17.53■□□□□ 0.4
CTDSP1-207ENST00000473420 ADSLP30566 484 aaPredicted RBP17.53■□□□□ 0.4
CTDSP1-207ENST00000473420 SOAT1P35610 550 aa17.53■□□□□ 0.4
CTDSP1-207ENST00000473420 MAP3K8P41279 467 aa17.53■□□□□ 0.4
CTDSP1-207ENST00000473420 PRIM2P49643 509 aa17.53■□□□□ 0.4
CTDSP1-207ENST00000473420 TMED10P49755 219 aaKnown RBP17.53■□□□□ 0.4
CTDSP1-207ENST00000473420 PRKAG1P54619 331 aa17.53■□□□□ 0.4
CTDSP1-207ENST00000473420 PSG6Q00889 435 aa17.53■□□□□ 0.4
CTDSP1-207ENST00000473420 OC90Q02509 493 aaPredicted RBP17.53■□□□□ 0.4
CTDSP1-207ENST00000473420 OR1C1Q15619 314 aa17.53■□□□□ 0.4
CTDSP1-207ENST00000473420 MAPKAPK3Q16644 382 aa17.53■□□□□ 0.4
CTDSP1-207ENST00000473420 CT45A2Q5DJT8 189 aa17.53■□□□□ 0.4
CTDSP1-207ENST00000473420 ZNF468Q5VIY5 522 aaPredicted RBP17.53■□□□□ 0.4
CTDSP1-207ENST00000473420 MFSD12Q6NUT3 480 aa17.53■□□□□ 0.4
CTDSP1-207ENST00000473420 LYPD8Q6UX82 237 aa17.53■□□□□ 0.4
CTDSP1-207ENST00000473420 SZRD1Q7Z422 152 aa17.53■□□□□ 0.4
CTDSP1-207ENST00000473420 TRIML2Q8N7C3 387 aa17.53■□□□□ 0.4
CTDSP1-207ENST00000473420 PNPLA2Q96AD5 504 aa17.53■□□□□ 0.4
CTDSP1-207ENST00000473420 SPDL1Q96EA4 605 aa17.53■□□□□ 0.4
CTDSP1-207ENST00000473420 ITCHQ96J02 903 aa17.53■□□□□ 0.4
CTDSP1-207ENST00000473420 BBC3Q96PG8 261 aaPredicted RBP17.53■□□□□ 0.4
CTDSP1-207ENST00000473420 PANX1Q96RD7 426 aa17.53■□□□□ 0.4
CTDSP1-207ENST00000473420 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.53■□□□□ 0.43e-11■■■■□ 21.4
CTDSP1-207ENST00000473420 SLC52A3Q9NQ40 469 aa17.53■□□□□ 0.4
CTDSP1-207ENST00000473420 SERHLQ9NQF3 203 aa17.53■□□□□ 0.4
CTDSP1-207ENST00000473420 SAR1AQ9NR31 198 aa17.53■□□□□ 0.4
CTDSP1-207ENST00000473420 HPF1Q9NWY4 346 aa17.53■□□□□ 0.4
CTDSP1-207ENST00000473420 ERVK-11Q9UQG0 969 aa17.53■□□□□ 0.4
CTDSP1-207ENST00000473420 CSAG2Q9Y5P2 127 aa17.53■□□□□ 0.4
CTDSP1-207ENST00000473420 NPFFR2Q9Y5X5 522 aa17.53■□□□□ 0.4
CTDSP1-207ENST00000473420 ATRXP46100 2492 aa17.52■□□□□ 0.4
CTDSP1-207ENST00000473420 NR5A2O00482 541 aa17.52■□□□□ 0.4
CTDSP1-207ENST00000473420 SLC22A2O15244 555 aa17.52■□□□□ 0.4
CTDSP1-207ENST00000473420 NEURL1O76050 574 aa17.52■□□□□ 0.4
CTDSP1-207ENST00000473420 SOX30O94993 753 aa17.52■□□□□ 0.4
CTDSP1-207ENST00000473420 OR6B1O95007 311 aa17.52■□□□□ 0.4
CTDSP1-207ENST00000473420 F10P00742 488 aa17.52■□□□□ 0.4
CTDSP1-207ENST00000473420 HMGN2P05204 90 aaKnown RBP17.52■□□□□ 0.4
CTDSP1-207ENST00000473420 KRT16P08779 473 aa17.52■□□□□ 0.4
CTDSP1-207ENST00000473420 TRPC1P48995 793 aa17.52■□□□□ 0.4
CTDSP1-207ENST00000473420 TP53BP2Q13625 1128 aa17.52■□□□□ 0.4
CTDSP1-207ENST00000473420 ZNF169Q14929 603 aaPredicted RBP17.52■□□□□ 0.4
CTDSP1-207ENST00000473420 ZNF791Q3KP31 576 aaPredicted RBP17.52■□□□□ 0.4
CTDSP1-207ENST00000473420 EXOSC6Q5RKV6 272 aaKnown RBP17.52■□□□□ 0.4
CTDSP1-207ENST00000473420 SLC6A19Q695T7 634 aa17.52■□□□□ 0.4
CTDSP1-207ENST00000473420 NPSR1Q6W5P4 371 aa17.52■□□□□ 0.4
CTDSP1-207ENST00000473420 SLC34A3Q8N130 599 aa17.52■□□□□ 0.4
CTDSP1-207ENST00000473420 CYP4Z2PQ8N1L4 340 aa17.52■□□□□ 0.4
CTDSP1-207ENST00000473420 TEX19Q8NA77 164 aa17.52■□□□□ 0.4
CTDSP1-207ENST00000473420 GOLM1Q8NBJ4 401 aa17.52■□□□□ 0.4
CTDSP1-207ENST00000473420 VPS33AQ96AX1 596 aa17.52■□□□□ 0.4
CTDSP1-207ENST00000473420 SPACA9Q96E40 222 aaPredicted RBP17.52■□□□□ 0.4
CTDSP1-207ENST00000473420 SIGLEC12Q96PQ1 595 aa17.52■□□□□ 0.4
CTDSP1-207ENST00000473420 Q9N2J8 555 aa17.52■□□□□ 0.4
CTDSP1-207ENST00000473420 EQTNQ9NQ60 294 aa17.52■□□□□ 0.4
CTDSP1-207ENST00000473420 GPATCH2Q9NW75 528 aa17.52■□□□□ 0.4
CTDSP1-207ENST00000473420 GIN1Q9NXP7 522 aa17.52■□□□□ 0.4
CTDSP1-207ENST00000473420 ANKRD10Q9NXR5 420 aa17.52■□□□□ 0.4
CTDSP1-207ENST00000473420 VPS4AQ9UN37 437 aa17.52■□□□□ 0.4
CTDSP1-207ENST00000473420 ZFYVE26Q68DK2 2539 aa17.52■□□□□ 0.39
CTDSP1-207ENST00000473420 FAM208BQ5VWN6 2430 aa17.51■□□□□ 0.39
CTDSP1-207ENST00000473420 RNF103-CHMP3A0A140T963 221 aa17.51■□□□□ 0.39
CTDSP1-207ENST00000473420 A0A1W2PP18 115 aa17.51■□□□□ 0.39
CTDSP1-207ENST00000473420 RFXANKO14593 260 aa17.51■□□□□ 0.39
CTDSP1-207ENST00000473420 CCDC22O60826 627 aa17.51■□□□□ 0.39
CTDSP1-207ENST00000473420 NKX2-2O95096 273 aa17.51■□□□□ 0.39
CTDSP1-207ENST00000473420 ZCCHC18P0CG32 403 aa17.51■□□□□ 0.39
CTDSP1-207ENST00000473420 CAPN3P20807 821 aa17.51■□□□□ 0.39
CTDSP1-207ENST00000473420 ABCD3P28288 659 aa17.51■□□□□ 0.39
CTDSP1-207ENST00000473420 CORO7P57737 925 aa17.51■□□□□ 0.39
CTDSP1-207ENST00000473420 NNATQ16517 81 aa17.51■□□□□ 0.39
CTDSP1-207ENST00000473420 NTRK2Q16620 822 aa17.51■□□□□ 0.39
CTDSP1-207ENST00000473420 CYP27C1Q4G0S4 372 aa17.51■□□□□ 0.39
CTDSP1-207ENST00000473420 CDC73Q6P1J9 531 aa17.51■□□□□ 0.39
CTDSP1-207ENST00000473420 IL20RBQ6UXL0 311 aa17.51■□□□□ 0.39
CTDSP1-207ENST00000473420 RTL4Q6ZR62 310 aa17.51■□□□□ 0.39
CTDSP1-207ENST00000473420 CNTRLQ7Z7A1 2325 aa17.51■□□□□ 0.39
CTDSP1-207ENST00000473420 PIGWQ7Z7B1 504 aa17.51■□□□□ 0.39
CTDSP1-207ENST00000473420 ZNF227Q86WZ6 799 aa17.51■□□□□ 0.39
CTDSP1-207ENST00000473420 SLC44A2Q8IWA5 706 aaPredicted RBP17.51■□□□□ 0.39
CTDSP1-207ENST00000473420 CATSPER1Q8NEC5 780 aa17.51■□□□□ 0.39
CTDSP1-207ENST00000473420 OR5AK3PQ8NH89 298 aa17.51■□□□□ 0.39
CTDSP1-207ENST00000473420 GTF2H4Q92759 462 aa17.51■□□□□ 0.39
CTDSP1-207ENST00000473420 TMEM125Q96AQ2 219 aa17.51■□□□□ 0.39
CTDSP1-207ENST00000473420 SCMH1Q96GD3 660 aa17.51■□□□□ 0.39
CTDSP1-207ENST00000473420 SGCZQ96LD1 299 aa17.51■□□□□ 0.39
CTDSP1-207ENST00000473420 PHF12Q96QT6 1004 aa17.51■□□□□ 0.39
CTDSP1-207ENST00000473420 ACTRT3Q9BYD9 372 aa17.51■□□□□ 0.39
CTDSP1-207ENST00000473420 ANAPC2Q9UJX6 822 aa17.51■□□□□ 0.39
CTDSP1-207ENST00000473420 NME6O75414 186 aaPredicted RBP17.5■□□□□ 0.39
CTDSP1-207ENST00000473420 SLC25A12O75746 678 aa17.5■□□□□ 0.39
CTDSP1-207ENST00000473420 CD46P15529 392 aa17.5■□□□□ 0.39
CTDSP1-207ENST00000473420 CDKN2CP42773 168 aa17.5■□□□□ 0.39
CTDSP1-207ENST00000473420 PLCXD2Q0VAA5 305 aa17.5■□□□□ 0.39
CTDSP1-207ENST00000473420 GAB1Q13480 694 aa17.5■□□□□ 0.39
CTDSP1-207ENST00000473420 LASP1Q14847 261 aaKnown RBP17.5■□□□□ 0.39
CTDSP1-207ENST00000473420 NADK2Q4G0N4 442 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms