RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 TRAF6Q9Y4K3 522 aa10.59□□□□□ -0.71
CPNE1-222ENST00000473373 LIPGQ9Y5X9 500 aa10.59□□□□□ -0.71
CPNE1-222ENST00000473373 CHCHD2Q9Y6H1 151 aaPredicted RBP10.59□□□□□ -0.71
CPNE1-222ENST00000473373 OR14I1A6ND48 311 aa10.58□□□□□ -0.72
CPNE1-222ENST00000473373 FRG2CA6NGY1 282 aa10.58□□□□□ -0.72
CPNE1-222ENST00000473373 PIP5K1BO14986 540 aa10.58□□□□□ -0.72
CPNE1-222ENST00000473373 SNX4O95219 450 aa10.58□□□□□ -0.72
CPNE1-222ENST00000473373 CLDN14O95500 239 aa10.58□□□□□ -0.72
CPNE1-222ENST00000473373 CBX7O95931 251 aa10.58□□□□□ -0.72
CPNE1-222ENST00000473373 COX6B1P14854 86 aa10.58□□□□□ -0.72
CPNE1-222ENST00000473373 ELAVL4P26378 380 aaKnown RBP10.58□□□□□ -0.72
CPNE1-222ENST00000473373 HPCAL1P37235 193 aa10.58□□□□□ -0.72
CPNE1-222ENST00000473373 MC3RP41968 323 aa10.58□□□□□ -0.72
CPNE1-222ENST00000473373 PPICP45877 212 aa10.58□□□□□ -0.72
CPNE1-222ENST00000473373 ASMTP46597 345 aa10.58□□□□□ -0.72
CPNE1-222ENST00000473373 MRPS22P82650 360 aaKnown RBP10.58□□□□□ -0.72
CPNE1-222ENST00000473373 ADORA2A-AS1P86434 159 aa10.58□□□□□ -0.72
CPNE1-222ENST00000473373 ART3Q13508 389 aa10.58□□□□□ -0.72
CPNE1-222ENST00000473373 ZNF628Q5EBL2 1059 aa10.58□□□□□ -0.72
CPNE1-222ENST00000473373 KANK2Q63ZY3 851 aa10.58□□□□□ -0.72
CPNE1-222ENST00000473373 BICRALQ6AI39 1079 aa10.58□□□□□ -0.72
CPNE1-222ENST00000473373 SP5Q6BEB4 398 aaPredicted RBP10.58□□□□□ -0.72
CPNE1-222ENST00000473373 LYPD8Q6UX82 237 aa10.58□□□□□ -0.72
CPNE1-222ENST00000473373 ANGPTL8Q6UXH0 198 aa10.58□□□□□ -0.72
CPNE1-222ENST00000473373 TRILQ7L0X0 811 aa10.58□□□□□ -0.72
CPNE1-222ENST00000473373 NUP54Q7Z3B4 507 aa10.58□□□□□ -0.72
CPNE1-222ENST00000473373 SLC44A2Q8IWA5 706 aaPredicted RBP10.58□□□□□ -0.72
CPNE1-222ENST00000473373 MREGQ8N565 214 aa10.58□□□□□ -0.72
CPNE1-222ENST00000473373 ZNF441Q8N8Z8 693 aa10.58□□□□□ -0.72
CPNE1-222ENST00000473373 OR1J4Q8NGS1 313 aa10.58□□□□□ -0.72
CPNE1-222ENST00000473373 RND1Q92730 232 aa10.58□□□□□ -0.72
CPNE1-222ENST00000473373 TMBIM1Q969X1 311 aa10.58□□□□□ -0.72
CPNE1-222ENST00000473373 METTL2AQ96IZ6 378 aaKnown RBP10.58□□□□□ -0.72
CPNE1-222ENST00000473373 PKNOX2Q96KN3 472 aa10.58□□□□□ -0.72
CPNE1-222ENST00000473373 PPP3R2Q96LZ3 170 aa10.58□□□□□ -0.72
CPNE1-222ENST00000473373 ZNF681Q96N22 645 aa10.58□□□□□ -0.72
CPNE1-222ENST00000473373 STMN4Q9H169 189 aaPredicted RBP10.58□□□□□ -0.72
CPNE1-222ENST00000473373 SLC6A15Q9H2J7 730 aa10.58□□□□□ -0.72
CPNE1-222ENST00000473373 ZNF703Q9H7S9 590 aaPredicted RBP10.58□□□□□ -0.72
CPNE1-222ENST00000473373 ZDHHC11Q9H8X9 412 aa10.58□□□□□ -0.72
CPNE1-222ENST00000473373 FOLH1BQ9HBA9 442 aa10.58□□□□□ -0.72
CPNE1-222ENST00000473373 TNFRSF12AQ9NP84 129 aa10.58□□□□□ -0.72
CPNE1-222ENST00000473373 CHST11Q9NPF2 352 aa10.58□□□□□ -0.72
CPNE1-222ENST00000473373 EQTNQ9NQ60 294 aa10.58□□□□□ -0.72
CPNE1-222ENST00000473373 PNPLA3Q9NST1 481 aa10.58□□□□□ -0.72
CPNE1-222ENST00000473373 MRTO4Q9UKD2 239 aaKnown RBP10.58□□□□□ -0.72
CPNE1-222ENST00000473373 CNOT11Q9UKZ1 510 aaKnown RBP10.58□□□□□ -0.72
CPNE1-222ENST00000473373 MAPRE3Q9UPY8 281 aa10.58□□□□□ -0.72
CPNE1-222ENST00000473373 WBP11Q9Y2W2 641 aaKnown RBP10.58□□□□□ -0.72
CPNE1-222ENST00000473373 DOPEY1Q5JWR5 2465 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 PRAMEF25A6NGN4 478 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 FAM90A27PA6NNH2 459 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 TMEM233B4DJY2 109 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 AQP7O14520 342 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 HNRNPRO43390 633 aaKnown RBP10.57□□□□□ -0.72
CPNE1-222ENST00000473373 SUSD5O60279 629 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 HCN1O60741 890 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 PEX11AO75192 247 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 GLSO94925 669 aaPredicted RBP10.57□□□□□ -0.72
CPNE1-222ENST00000473373 SLITRK5O94991 958 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 BPGMP07738 259 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 ABCB1P08183 1280 aaPredicted RBP10.57□□□□□ -0.72
CPNE1-222ENST00000473373 CELA3AP09093 270 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 PRF1P14222 555 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 NAGAP17050 411 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 S1PR1P21453 382 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 DRD5P21918 477 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 SERPINB5P36952 375 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 CASP3P42574 277 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 PRKAG1P54619 331 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 MANFP55145 182 aaKnown RBP10.57□□□□□ -0.72
CPNE1-222ENST00000473373 ZNF844Q08AG5 666 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 MGAT2Q10469 447 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 PMPCAQ10713 525 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 FOXO1Q12778 655 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 EFR3AQ14156 821 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 CHI3L2Q15782 390 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 GXYLT1Q4G148 440 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 HHATQ5VTY9 493 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 FAM71E1Q6IPT2 247 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 ANKRD26P1Q6NSI1 321 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 SLC30A6Q6NXT4 461 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 ACAD11Q709F0 780 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 LARP4Q71RC2 724 aaKnown RBP eCLIP10.57□□□□□ -0.728e-24■□□□□ 9.5
CPNE1-222ENST00000473373 R3HCC1LQ7Z5L2 792 aaKnown RBP10.57□□□□□ -0.72
CPNE1-222ENST00000473373 ANKRD42Q8N9B4 389 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 FNDC5Q8NAU1 212 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 SIMC1Q8NDZ2 872 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 PHF10Q8WUB8 498 aaKnown RBP10.57□□□□□ -0.72
CPNE1-222ENST00000473373 ASB5Q8WWX0 329 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 MARVELD3Q96A59 401 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 CTHRC1Q96CG8 243 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 TUBGCP3Q96CW5 907 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 ERP27Q96DN0 273 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 ZBED6CLQ96FA7 236 aaPredicted RBP10.57□□□□□ -0.72
CPNE1-222ENST00000473373 PPP1R36Q96LQ0 422 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 COL21A1Q96P44 957 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 ADOQ96SZ5 270 aa10.57□□□□□ -0.72
CPNE1-222ENST00000473373 SECISBP2Q96T21 854 aaKnown RBP10.57□□□□□ -0.72
CPNE1-222ENST00000473373 CCT7Q99832 543 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms