RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 ANKRA2Q9H9E1 313 aa18.46■□□□□ 0.55
SF1-213ENST00000472725 LIN28AQ9H9Z2 209 aaKnown RBP18.46■□□□□ 0.55
SF1-213ENST00000472725 PLA2G3Q9NZ20 509 aa18.46■□□□□ 0.55
SF1-213ENST00000472725 DTX4Q9Y2E6 619 aa18.46■□□□□ 0.55
SF1-213ENST00000472725 SNX8Q9Y5X2 465 aa18.46■□□□□ 0.55
SF1-213ENST00000472725 NPFFR2Q9Y5X5 522 aa18.46■□□□□ 0.55
SF1-213ENST00000472725 CNTRLQ7Z7A1 2325 aa18.46■□□□□ 0.55
SF1-213ENST00000472725 CCDC22O60826 627 aa18.45■□□□□ 0.54
SF1-213ENST00000472725 ABCB1P08183 1280 aaPredicted RBP18.45■□□□□ 0.54
SF1-213ENST00000472725 ZCCHC18P0CG32 403 aa18.45■□□□□ 0.54
SF1-213ENST00000472725 CD46P15529 392 aa18.45■□□□□ 0.54
SF1-213ENST00000472725 SOX3P41225 446 aa18.45■□□□□ 0.54
SF1-213ENST00000472725 MAP3K8P41279 467 aa18.45■□□□□ 0.54
SF1-213ENST00000472725 MAGEA8P43361 318 aa18.45■□□□□ 0.54
SF1-213ENST00000472725 PSG6Q00889 435 aa18.45■□□□□ 0.54
SF1-213ENST00000472725 ZNF155Q12901 538 aaPredicted RBP18.45■□□□□ 0.54
SF1-213ENST00000472725 ZNF169Q14929 603 aaPredicted RBP18.45■□□□□ 0.54
SF1-213ENST00000472725 OR1C1Q15619 314 aa18.45■□□□□ 0.54
SF1-213ENST00000472725 ZNF791Q3KP31 576 aaPredicted RBP18.45■□□□□ 0.54
SF1-213ENST00000472725 CYP27C1Q4G0S4 372 aa18.45■□□□□ 0.54
SF1-213ENST00000472725 AGKQ53H12 422 aa18.45■□□□□ 0.54
SF1-213ENST00000472725 SLC6A19Q695T7 634 aa18.45■□□□□ 0.54
SF1-213ENST00000472725 RPUSD3Q6P087 351 aaKnown RBP18.45■□□□□ 0.54
SF1-213ENST00000472725 LYPD8Q6UX82 237 aa18.45■□□□□ 0.54
SF1-213ENST00000472725 ANKRD46Q86W74 232 aa18.45■□□□□ 0.54
SF1-213ENST00000472725 CYP4Z2PQ8N1L4 340 aa18.45■□□□□ 0.54
SF1-213ENST00000472725 DNAJB8Q8NHS0 232 aa18.45■□□□□ 0.54
SF1-213ENST00000472725 TMEM125Q96AQ2 219 aa18.45■□□□□ 0.54
SF1-213ENST00000472725 SPACA9Q96E40 222 aaPredicted RBP18.45■□□□□ 0.54
SF1-213ENST00000472725 TRIM4Q9C037 500 aa18.45■□□□□ 0.54
SF1-213ENST00000472725 Q9N2J8 555 aa18.45■□□□□ 0.54
SF1-213ENST00000472725 MRTO4Q9UKD2 239 aaKnown RBP18.45■□□□□ 0.54
SF1-213ENST00000472725 ADAM21Q9UKJ8 722 aa18.45■□□□□ 0.54
SF1-213ENST00000472725 VPS4AQ9UN37 437 aa18.45■□□□□ 0.54
SF1-213ENST00000472725 ERVK-11Q9UQG0 969 aa18.45■□□□□ 0.54
SF1-213ENST00000472725 ATMQ13315 3056 aa18.45■□□□□ 0.54
SF1-213ENST00000472725 RFXANKO14593 260 aa18.44■□□□□ 0.54
SF1-213ENST00000472725 SHOX2O60902 331 aaPredicted RBP18.44■□□□□ 0.54
SF1-213ENST00000472725 ABCB7O75027 752 aa18.44■□□□□ 0.54
SF1-213ENST00000472725 NEURL1O76050 574 aa18.44■□□□□ 0.54
SF1-213ENST00000472725 CPSF4O95639 269 aaKnown RBP18.44■□□□□ 0.54
SF1-213ENST00000472725 CD97P48960 835 aa18.44■□□□□ 0.54
SF1-213ENST00000472725 PRKAG1P54619 331 aa18.44■□□□□ 0.54
SF1-213ENST00000472725 INAQ16352 499 aa18.44■□□□□ 0.54
SF1-213ENST00000472725 NTRK2Q16620 822 aa18.44■□□□□ 0.54
SF1-213ENST00000472725 TIGD2Q4W5G0 525 aa18.44■□□□□ 0.54
SF1-213ENST00000472725 EXOSC6Q5RKV6 272 aaKnown RBP18.44■□□□□ 0.54
SF1-213ENST00000472725 MFSD12Q6NUT3 480 aa18.44■□□□□ 0.54
SF1-213ENST00000472725 C16orf47Q6ZP98 133 aaPredicted RBP18.44■□□□□ 0.54
SF1-213ENST00000472725 RTL4Q6ZR62 310 aa18.44■□□□□ 0.54
SF1-213ENST00000472725 SLC34A3Q8N130 599 aa18.44■□□□□ 0.54
SF1-213ENST00000472725 TMEM178AQ8NBL3 297 aa18.44■□□□□ 0.54
SF1-213ENST00000472725 C5orf34Q96MH7 638 aa18.44■□□□□ 0.54
SF1-213ENST00000472725 PHF12Q96QT6 1004 aa18.44■□□□□ 0.54
SF1-213ENST00000472725 SECISBP2Q96T21 854 aaKnown RBP18.44■□□□□ 0.54
SF1-213ENST00000472725 STACQ99469 402 aa18.44■□□□□ 0.54
SF1-213ENST00000472725 ACTRT3Q9BYD9 372 aa18.44■□□□□ 0.54
SF1-213ENST00000472725 TIMMDC1Q9NPL8 285 aa18.44■□□□□ 0.54
SF1-213ENST00000472725 SERHLQ9NQF3 203 aa18.44■□□□□ 0.54
SF1-213ENST00000472725 SAR1AQ9NR31 198 aa18.44■□□□□ 0.54
SF1-213ENST00000472725 FAF1Q9UNN5 650 aaPredicted RBP18.44■□□□□ 0.54
SF1-213ENST00000472725 PCDHGB3Q9Y5G1 929 aa18.44■□□□□ 0.54
SF1-213ENST00000472725 A0A1W2PP18 115 aa18.43■□□□□ 0.54
SF1-213ENST00000472725 DUXAA6NLW8 204 aa18.43■□□□□ 0.54
SF1-213ENST00000472725 C9JVG2 144 aa18.43■□□□□ 0.54
SF1-213ENST00000472725 OR6B1O95007 311 aa18.43■□□□□ 0.54
SF1-213ENST00000472725 NKX2-2O95096 273 aa18.43■□□□□ 0.54
SF1-213ENST00000472725 HMGN2P05204 90 aaKnown RBP18.43■□□□□ 0.54
SF1-213ENST00000472725 ABCD3P28288 659 aa18.43■□□□□ 0.54
SF1-213ENST00000472725 SOAT1P35610 550 aa18.43■□□□□ 0.54
SF1-213ENST00000472725 RPP38P78345 283 aaKnown RBP18.43■□□□□ 0.54
SF1-213ENST00000472725 MRPS22P82650 360 aaKnown RBP18.43■□□□□ 0.54
SF1-213ENST00000472725 TP53BP2Q13625 1128 aa18.43■□□□□ 0.54
SF1-213ENST00000472725 MAPRE2Q15555 327 aa18.43■□□□□ 0.54
SF1-213ENST00000472725 SOWAHCQ53LP3 525 aaPredicted RBP18.43■□□□□ 0.54
SF1-213ENST00000472725 ZNF468Q5VIY5 522 aaPredicted RBP18.43■□□□□ 0.54
SF1-213ENST00000472725 CDC73Q6P1J9 531 aa18.43■□□□□ 0.54
SF1-213ENST00000472725 IL20RBQ6UXL0 311 aa18.43■□□□□ 0.54
SF1-213ENST00000472725 SZRD1Q7Z422 152 aa18.43■□□□□ 0.54
SF1-213ENST00000472725 PIGWQ7Z7B1 504 aa18.43■□□□□ 0.54
SF1-213ENST00000472725 SLC44A2Q8IWA5 706 aaPredicted RBP18.43■□□□□ 0.54
SF1-213ENST00000472725 CATSPER1Q8NEC5 780 aa18.43■□□□□ 0.54
SF1-213ENST00000472725 MIPOL1Q8TD10 442 aa18.43■□□□□ 0.54
SF1-213ENST00000472725 SCMH1Q96GD3 660 aa18.43■□□□□ 0.54
SF1-213ENST00000472725 BBC3Q96PG8 261 aaPredicted RBP18.43■□□□□ 0.54
SF1-213ENST00000472725 FAM107BQ9H098 131 aa18.43■□□□□ 0.54
SF1-213ENST00000472725 SLC52A3Q9NQ40 469 aa18.43■□□□□ 0.54
SF1-213ENST00000472725 DUSP22Q9NRW4 184 aa18.43■□□□□ 0.54
SF1-213ENST00000472725 GPATCH2Q9NW75 528 aa18.43■□□□□ 0.54
SF1-213ENST00000472725 RNF103-CHMP3A0A140T963 221 aa18.42■□□□□ 0.54
SF1-213ENST00000472725 NR5A2O00482 541 aa18.42■□□□□ 0.54
SF1-213ENST00000472725 TP53I11O14683 189 aa18.42■□□□□ 0.54
SF1-213ENST00000472725 ZNF354AO60765 605 aaPredicted RBP18.42■□□□□ 0.54
SF1-213ENST00000472725 PPM1BO75688 479 aa18.42■□□□□ 0.54
SF1-213ENST00000472725 SLC25A12O75746 678 aa18.42■□□□□ 0.54
SF1-213ENST00000472725 SP1P08047 785 aa18.42■□□□□ 0.54
SF1-213ENST00000472725 ALOX5P09917 674 aa18.42■□□□□ 0.54
SF1-213ENST00000472725 KRT20P35900 424 aa18.42■□□□□ 0.54
SF1-213ENST00000472725 PSMD4P55036 377 aaKnown RBP18.42■□□□□ 0.54
SF1-213ENST00000472725 PLCXD2Q0VAA5 305 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms