RNA–Protein interactions for RNA: ENST00000472503.5

TMEM39B-206, Transcript of transmembrane protein 39B, humanhuman

TSL 3

Gene TMEM39B, Length 950 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-206ENST00000472503 NCLNQ969V3 563 aa11.97□□□□□ -0.49
TMEM39B-206ENST00000472503 C16orf58Q96GQ5 468 aa11.97□□□□□ -0.49
TMEM39B-206ENST00000472503 VSTM2LQ96N03 204 aa11.97□□□□□ -0.49
TMEM39B-206ENST00000472503 LPAR4Q99677 370 aa11.97□□□□□ -0.49
TMEM39B-206ENST00000472503 CNPPD1Q9BV87 410 aa11.97□□□□□ -0.49
TMEM39B-206ENST00000472503 LRMDAQ9H2I8 198 aa11.97□□□□□ -0.49
TMEM39B-206ENST00000472503 KAT8Q9H7Z6 458 aaKnown RBP11.97□□□□□ -0.49
TMEM39B-206ENST00000472503 DDX18Q9NVP1 670 aaKnown RBP11.97□□□□□ -0.49
TMEM39B-206ENST00000472503 NDE1Q9NXR1 346 aa11.97□□□□□ -0.49
TMEM39B-206ENST00000472503 CD300AQ9UGN4 299 aa11.97□□□□□ -0.49
TMEM39B-206ENST00000472503 CFAP46Q8IYW2 2715 aa11.97□□□□□ -0.49
TMEM39B-206ENST00000472503 CPAMD8Q8IZJ3 1885 aa11.96□□□□□ -0.49
TMEM39B-206ENST00000472503 C15orf38-AP3S2A0A0A6YYH1 394 aa11.96□□□□□ -0.49
TMEM39B-206ENST00000472503 DYRK3O43781 588 aa11.96□□□□□ -0.49
TMEM39B-206ENST00000472503 PRAMEF2O60811 474 aa11.96□□□□□ -0.49
TMEM39B-206ENST00000472503 NME6O75414 186 aaPredicted RBP11.96□□□□□ -0.49
TMEM39B-206ENST00000472503 TNFRSF21O75509 655 aa11.96□□□□□ -0.49
TMEM39B-206ENST00000472503 KRT75O95678 551 aa11.96□□□□□ -0.49
TMEM39B-206ENST00000472503 HPP00738 406 aa11.96□□□□□ -0.49
TMEM39B-206ENST00000472503 PPIBP23284 216 aaKnown RBP11.96□□□□□ -0.49
TMEM39B-206ENST00000472503 OTX2P32243 289 aa11.96□□□□□ -0.49
TMEM39B-206ENST00000472503 RASSF2P50749 326 aa11.96□□□□□ -0.49
TMEM39B-206ENST00000472503 MTPNP58546 118 aa11.96□□□□□ -0.49
TMEM39B-206ENST00000472503 CDC20Q12834 499 aa11.96□□□□□ -0.49
TMEM39B-206ENST00000472503 PLAG1Q6DJT9 500 aa11.96□□□□□ -0.49
TMEM39B-206ENST00000472503 CDC73Q6P1J9 531 aa11.96□□□□□ -0.49
TMEM39B-206ENST00000472503 BHLHB9Q6PI77 547 aa11.96□□□□□ -0.49
TMEM39B-206ENST00000472503 NET1Q7Z628 596 aaPredicted RBP11.96□□□□□ -0.49
TMEM39B-206ENST00000472503 ARPINQ7Z6K5 226 aa11.96□□□□□ -0.49
TMEM39B-206ENST00000472503 RNF130Q86XS8 419 aa11.96□□□□□ -0.49
TMEM39B-206ENST00000472503 RAB43Q86YS6 212 aa11.96□□□□□ -0.49
TMEM39B-206ENST00000472503 C9orf40Q8IXQ3 194 aa11.96□□□□□ -0.49
TMEM39B-206ENST00000472503 DEFB107AQ8IZN7 70 aa11.96□□□□□ -0.49
TMEM39B-206ENST00000472503 C16orf52Q8NHV5 167 aa11.96□□□□□ -0.49
TMEM39B-206ENST00000472503 M1APQ8TC57 530 aa11.96□□□□□ -0.49
TMEM39B-206ENST00000472503 ELP5Q8TE02 316 aa11.96□□□□□ -0.49
TMEM39B-206ENST00000472503 ADIPOR1Q96A54 375 aa11.96□□□□□ -0.49
TMEM39B-206ENST00000472503 MAGED4Q96JG8 741 aa11.96□□□□□ -0.49
TMEM39B-206ENST00000472503 ZNF583Q96ND8 569 aa11.96□□□□□ -0.49
TMEM39B-206ENST00000472503 MS4A4EQ96PG1 132 aa11.96□□□□□ -0.49
TMEM39B-206ENST00000472503 SH3GL1Q99961 368 aa11.96□□□□□ -0.49
TMEM39B-206ENST00000472503 LMF2Q9BU23 707 aaKnown RBP11.96□□□□□ -0.49
TMEM39B-206ENST00000472503 OR8D2Q9GZM6 311 aa11.96□□□□□ -0.49
TMEM39B-206ENST00000472503 P4HTMQ9NXG6 502 aa11.96□□□□□ -0.49
TMEM39B-206ENST00000472503 GIN1Q9NXP7 522 aa11.96□□□□□ -0.49
TMEM39B-206ENST00000472503 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.96□□□□□ -0.49
TMEM39B-206ENST00000472503 DTX4Q9Y2E6 619 aa11.96□□□□□ -0.49
TMEM39B-206ENST00000472503 HELZ2Q9BYK8 2649 aaKnown RBP11.96□□□□□ -0.5
TMEM39B-206ENST00000472503 TMEM200CA6NKL6 621 aa11.95□□□□□ -0.5
TMEM39B-206ENST00000472503 OR6C76A6NM76 312 aa11.95□□□□□ -0.5
TMEM39B-206ENST00000472503 GYG2O15488 501 aa11.95□□□□□ -0.5
TMEM39B-206ENST00000472503 GSC2O15499 205 aa11.95□□□□□ -0.5
TMEM39B-206ENST00000472503 NKX2-8O15522 239 aa11.95□□□□□ -0.5
TMEM39B-206ENST00000472503 PRKNO60260 465 aaPredicted RBP11.95□□□□□ -0.5
TMEM39B-206ENST00000472503 COQ9O75208 318 aa11.95□□□□□ -0.5
TMEM39B-206ENST00000472503 ACP2P11117 423 aa11.95□□□□□ -0.5
TMEM39B-206ENST00000472503 SFTPCP11686 197 aa11.95□□□□□ -0.5
TMEM39B-206ENST00000472503 MATN1P21941 496 aa11.95□□□□□ -0.5
TMEM39B-206ENST00000472503 CHI3L1P36222 383 aaPredicted RBP11.95□□□□□ -0.5
TMEM39B-206ENST00000472503 SLC7A2P52569 658 aa11.95□□□□□ -0.5
TMEM39B-206ENST00000472503 PRKAG1P54619 331 aa11.95□□□□□ -0.5
TMEM39B-206ENST00000472503 POLE2P56282 527 aa11.95□□□□□ -0.5
TMEM39B-206ENST00000472503 EEFSECP57772 596 aaKnown RBP11.95□□□□□ -0.5
TMEM39B-206ENST00000472503 TXNL4AP83876 142 aaKnown RBP11.95□□□□□ -0.5
TMEM39B-206ENST00000472503 MXRA7P84157 204 aa11.95□□□□□ -0.5
TMEM39B-206ENST00000472503 PSG6Q00889 435 aa11.95□□□□□ -0.5
TMEM39B-206ENST00000472503 Q0VFX4 171 aa11.95□□□□□ -0.5
TMEM39B-206ENST00000472503 FADDQ13158 208 aa11.95□□□□□ -0.5
TMEM39B-206ENST00000472503 TP53BP2Q13625 1128 aa11.95□□□□□ -0.5
TMEM39B-206ENST00000472503 LASP1Q14847 261 aaKnown RBP11.95□□□□□ -0.5
TMEM39B-206ENST00000472503 MYBPC3Q14896 1274 aa11.95□□□□□ -0.5
TMEM39B-206ENST00000472503 ADRM1Q16186 407 aa11.95□□□□□ -0.5
TMEM39B-206ENST00000472503 SPDYE7PQ495Y7 208 aa11.95□□□□□ -0.5
TMEM39B-206ENST00000472503 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.95□□□□□ -0.5
TMEM39B-206ENST00000472503 C6orf163Q5TEZ5 329 aa11.95□□□□□ -0.5
TMEM39B-206ENST00000472503 PGM2L1Q6PCE3 622 aa11.95□□□□□ -0.5
TMEM39B-206ENST00000472503 RNF111Q6ZNA4 994 aa11.95□□□□□ -0.5
TMEM39B-206ENST00000472503 LGI4Q8N135 537 aa11.95□□□□□ -0.5
TMEM39B-206ENST00000472503 HORMAD2Q8N7B1 307 aa11.95□□□□□ -0.5
TMEM39B-206ENST00000472503 ZNF441Q8N8Z8 693 aa11.95□□□□□ -0.5
TMEM39B-206ENST00000472503 OR8K3Q8NH51 312 aa11.95□□□□□ -0.5
TMEM39B-206ENST00000472503 PNPT1Q8TCS8 783 aaKnown RBP11.95□□□□□ -0.5
TMEM39B-206ENST00000472503 SLC35A4Q96G79 324 aa11.95□□□□□ -0.5
TMEM39B-206ENST00000472503 VMP1Q96GC9 406 aa11.95□□□□□ -0.5
TMEM39B-206ENST00000472503 SLC35G5Q96KT7 338 aa11.95□□□□□ -0.5
TMEM39B-206ENST00000472503 IP6K3Q96PC2 410 aa11.95□□□□□ -0.5
TMEM39B-206ENST00000472503 CDRT15Q96T59 188 aa11.95□□□□□ -0.5
TMEM39B-206ENST00000472503 CADM1Q9BY67 442 aaKnown RBP11.95□□□□□ -0.5
TMEM39B-206ENST00000472503 ACTRT3Q9BYD9 372 aa11.95□□□□□ -0.5
TMEM39B-206ENST00000472503 FOLH1BQ9HBA9 442 aa11.95□□□□□ -0.5
TMEM39B-206ENST00000472503 MMP25Q9NPA2 562 aa11.95□□□□□ -0.5
TMEM39B-206ENST00000472503 SPAG4Q9NPE6 437 aa11.95□□□□□ -0.5
TMEM39B-206ENST00000472503 GMPR2Q9P2T1 348 aaKnown RBP11.95□□□□□ -0.5
TMEM39B-206ENST00000472503 BCAP29Q9UHQ4 241 aa11.95□□□□□ -0.5
TMEM39B-206ENST00000472503 FBXL4Q9UKA2 621 aa11.95□□□□□ -0.5
TMEM39B-206ENST00000472503 AP3M1Q9Y2T2 418 aa11.95□□□□□ -0.5
TMEM39B-206ENST00000472503 NSG1A0A0A6YYJ2 146 aa11.94□□□□□ -0.5
TMEM39B-206ENST00000472503 PRAMEF27A3QJZ7 478 aa11.94□□□□□ -0.5
TMEM39B-206ENST00000472503 PRORSD1PA6NEY8 169 aa11.94□□□□□ -0.5
TMEM39B-206ENST00000472503 EVPLLA8MZ36 301 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms