RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 LTB4RQ15722 352 aa8.46□□□□□ -1.06
SMC4-213ENST00000472282 INAQ16352 499 aa8.46□□□□□ -1.06
SMC4-213ENST00000472282 SPRED3Q2MJR0 410 aa8.46□□□□□ -1.06
SMC4-213ENST00000472282 ZNF766Q5HY98 468 aa8.46□□□□□ -1.06
SMC4-213ENST00000472282 C6orf163Q5TEZ5 329 aa8.46□□□□□ -1.06
SMC4-213ENST00000472282 SPINK14Q6IE38 97 aa8.46□□□□□ -1.06
SMC4-213ENST00000472282 EPGNQ6UW88 154 aa8.46□□□□□ -1.06
SMC4-213ENST00000472282 GFRALQ6UXV0 394 aa8.46□□□□□ -1.06
SMC4-213ENST00000472282 ZNF227Q86WZ6 799 aa8.46□□□□□ -1.06
SMC4-213ENST00000472282 GALNT12Q8IXK2 581 aa8.46□□□□□ -1.06
SMC4-213ENST00000472282 LRRC34Q8IZ02 419 aa8.46□□□□□ -1.06
SMC4-213ENST00000472282 LRRC25Q8N386 305 aaPredicted RBP8.46□□□□□ -1.06
SMC4-213ENST00000472282 KRTCAP2Q8N6L1 136 aa8.46□□□□□ -1.06
SMC4-213ENST00000472282 ZNF321PQ8N8H1 164 aa8.46□□□□□ -1.06
SMC4-213ENST00000472282 APCDD1LQ8NCL9 501 aa8.46□□□□□ -1.06
SMC4-213ENST00000472282 C7orf57Q8NEG2 295 aa8.46□□□□□ -1.06
SMC4-213ENST00000472282 SLC2A12Q8TD20 617 aa8.46□□□□□ -1.06
SMC4-213ENST00000472282 ACTRT2Q8TDY3 377 aa8.46□□□□□ -1.06
SMC4-213ENST00000472282 ELP5Q8TE02 316 aa8.46□□□□□ -1.06
SMC4-213ENST00000472282 VMP1Q96GC9 406 aa8.46□□□□□ -1.06
SMC4-213ENST00000472282 MARK4Q96L34 752 aa8.46□□□□□ -1.06
SMC4-213ENST00000472282 ZNF354BQ96LW1 612 aa8.46□□□□□ -1.06
SMC4-213ENST00000472282 BBS4Q96RK4 519 aa8.46□□□□□ -1.06
SMC4-213ENST00000472282 EBF4Q9BQW3 602 aa8.46□□□□□ -1.06
SMC4-213ENST00000472282 CNPPD1Q9BV87 410 aa8.46□□□□□ -1.06
SMC4-213ENST00000472282 MRPL18Q9H0U6 180 aaKnown RBP8.46□□□□□ -1.06
SMC4-213ENST00000472282 CDCP1Q9H5V8 836 aa8.46□□□□□ -1.06
SMC4-213ENST00000472282 CCDC134Q9H6E4 229 aa8.46□□□□□ -1.06
SMC4-213ENST00000472282 CXorf21Q9HAI6 301 aa8.46□□□□□ -1.06
SMC4-213ENST00000472282 NPHS2Q9NP85 383 aa8.46□□□□□ -1.06
SMC4-213ENST00000472282 TCF7L2Q9NQB0 619 aa8.46□□□□□ -1.06
SMC4-213ENST00000472282 SLC35C2Q9NQQ7 365 aa8.46□□□□□ -1.06
SMC4-213ENST00000472282 KLHL1Q9NR64 748 aa8.46□□□□□ -1.06
SMC4-213ENST00000472282 FGFR1OP2Q9NVK5 253 aa8.46□□□□□ -1.06
SMC4-213ENST00000472282 ABI3Q9P2A4 366 aa8.46□□□□□ -1.06
SMC4-213ENST00000472282 COPS7AQ9UBW8 275 aa8.46□□□□□ -1.06
SMC4-213ENST00000472282 ZNF223Q9UK11 482 aaPredicted RBP8.46□□□□□ -1.06
SMC4-213ENST00000472282 PPIEQ9UNP9 301 aaKnown RBP8.46□□□□□ -1.06
SMC4-213ENST00000472282 ERVK-19Q9WJR5 959 aa8.46□□□□□ -1.06
SMC4-213ENST00000472282 ZNF780BQ9Y6R6 833 aa8.46□□□□□ -1.06
SMC4-213ENST00000472282 DOPEY1Q5JWR5 2465 aa8.46□□□□□ -1.06
SMC4-213ENST00000472282 GABRR3A8MPY1 467 aa8.45□□□□□ -1.06
SMC4-213ENST00000472282 POLR3GO15318 223 aaPredicted RBP8.45□□□□□ -1.06
SMC4-213ENST00000472282 TBX19O60806 448 aa8.45□□□□□ -1.06
SMC4-213ENST00000472282 NEURL1O76050 574 aa8.45□□□□□ -1.06
SMC4-213ENST00000472282 TGDSO95455 350 aa8.45□□□□□ -1.06
SMC4-213ENST00000472282 GHRHP01286 108 aa8.45□□□□□ -1.06
SMC4-213ENST00000472282 ATP1B1P05026 303 aa8.45□□□□□ -1.06
SMC4-213ENST00000472282 VIMP08670 466 aaKnown RBP8.45□□□□□ -1.06
SMC4-213ENST00000472282 CT62P0C5K7 136 aa8.45□□□□□ -1.06
SMC4-213ENST00000472282 EFNA1P20827 205 aaPredicted RBP8.45□□□□□ -1.06
SMC4-213ENST00000472282 NTSP30990 170 aa8.45□□□□□ -1.06
SMC4-213ENST00000472282 SSTR4P31391 388 aa8.45□□□□□ -1.06
SMC4-213ENST00000472282 GALNSP34059 522 aa8.45□□□□□ -1.06
SMC4-213ENST00000472282 RPL3P39023 403 aaKnown RBP8.45□□□□□ -1.06
SMC4-213ENST00000472282 CLCN2P51788 898 aa8.45□□□□□ -1.06
SMC4-213ENST00000472282 GPR143P51810 404 aa8.45□□□□□ -1.06
SMC4-213ENST00000472282 GYS2P54840 703 aa8.45□□□□□ -1.06
SMC4-213ENST00000472282 NME5P56597 212 aa8.45□□□□□ -1.06
SMC4-213ENST00000472282 CLDN8P56748 225 aa8.45□□□□□ -1.06
SMC4-213ENST00000472282 PLAURQ03405 335 aa8.45□□□□□ -1.06
SMC4-213ENST00000472282 ZNF267Q14586 743 aaPredicted RBP8.45□□□□□ -1.06
SMC4-213ENST00000472282 OR1C1Q15619 314 aa8.45□□□□□ -1.06
SMC4-213ENST00000472282 CEBPEQ15744 281 aa8.45□□□□□ -1.06
SMC4-213ENST00000472282 MEP1AQ16819 746 aa8.45□□□□□ -1.06
SMC4-213ENST00000472282 MPEG1Q2M385 716 aa8.45□□□□□ -1.06
SMC4-213ENST00000472282 PRICKLE4Q2TBC4 344 aa8.45□□□□□ -1.06
SMC4-213ENST00000472282 LSM12Q3MHD2 195 aaKnown RBP8.45□□□□□ -1.06
SMC4-213ENST00000472282 TMEM198Q66K66 360 aa8.45□□□□□ -1.06
SMC4-213ENST00000472282 FAM111BQ6SJ93 734 aa8.45□□□□□ -1.06
SMC4-213ENST00000472282 ACAD11Q709F0 780 aa8.45□□□□□ -1.06
SMC4-213ENST00000472282 R3HCC1LQ7Z5L2 792 aaKnown RBP8.45□□□□□ -1.06
SMC4-213ENST00000472282 SPATA19Q7Z5L4 167 aa8.45□□□□□ -1.06
SMC4-213ENST00000472282 SAMD14Q8IZD0 417 aaPredicted RBP8.45□□□□□ -1.06
SMC4-213ENST00000472282 FAM9CQ8IZT9 166 aa8.45□□□□□ -1.06
SMC4-213ENST00000472282 MORN4Q8NDC4 146 aa8.45□□□□□ -1.06
SMC4-213ENST00000472282 ADCY4Q8NFM4 1077 aa8.45□□□□□ -1.06
SMC4-213ENST00000472282 OR7A2PQ8NGA2 310 aa8.45□□□□□ -1.06
SMC4-213ENST00000472282 OR9A2Q8NGT5 310 aa8.45□□□□□ -1.06
SMC4-213ENST00000472282 CEP70Q8NHQ1 597 aa8.45□□□□□ -1.06
SMC4-213ENST00000472282 RFWD2Q8NHY2 731 aa8.45□□□□□ -1.06
SMC4-213ENST00000472282 SUN3Q8TAQ9 357 aa8.45□□□□□ -1.06
SMC4-213ENST00000472282 ZNF721Q8TF20 911 aa8.45□□□□□ -1.06
SMC4-213ENST00000472282 RIT1Q92963 219 aa8.45□□□□□ -1.06
SMC4-213ENST00000472282 RELTQ969Z4 430 aa8.45□□□□□ -1.06
SMC4-213ENST00000472282 CIDECQ96AQ7 238 aaPredicted RBP8.45□□□□□ -1.06
SMC4-213ENST00000472282 PPCDCQ96CD2 204 aa8.45□□□□□ -1.06
SMC4-213ENST00000472282 SCMH1Q96GD3 660 aa8.45□□□□□ -1.06
SMC4-213ENST00000472282 ZNF764Q96H86 408 aaPredicted RBP8.45□□□□□ -1.06
SMC4-213ENST00000472282 SENP5Q96HI0 755 aaPredicted RBP8.45□□□□□ -1.06
SMC4-213ENST00000472282 FBXL20Q96IG2 436 aa8.45□□□□□ -1.06
SMC4-213ENST00000472282 ART5Q96L15 291 aa8.45□□□□□ -1.06
SMC4-213ENST00000472282 DPY30Q9C005 99 aa8.45□□□□□ -1.06
SMC4-213ENST00000472282 BRINP2Q9C0B6 783 aa8.45□□□□□ -1.06
SMC4-213ENST00000472282 AIG1Q9NVV5 245 aa8.45□□□□□ -1.06
SMC4-213ENST00000472282 MAT2BQ9NZL9 334 aa8.45□□□□□ -1.06
SMC4-213ENST00000472282 SH3BP4Q9P0V3 963 aa8.45□□□□□ -1.06
SMC4-213ENST00000472282 SH3BGRL2Q9UJC5 107 aa8.45□□□□□ -1.06
SMC4-213ENST00000472282 DCTN4Q9UJW0 460 aa8.45□□□□□ -1.06
SMC4-213ENST00000472282 NINQ8N4C6 2090 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms