RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 GPC3P51654 580 aa2.94□□□□□ -1.94
CD46-213ENST00000471987 ARFIP1P53367 373 aa2.94□□□□□ -1.94
CD46-213ENST00000471987 CD47Q08722 323 aa2.94□□□□□ -1.94
CD46-213ENST00000471987 FAM219BQ5XKK7 198 aa2.94□□□□□ -1.94
CD46-213ENST00000471987 IYDQ6PHW0 289 aa2.94□□□□□ -1.94
CD46-213ENST00000471987 OTOAQ7RTW8 1153 aa2.94□□□□□ -1.94
CD46-213ENST00000471987 CCDC170Q8IYT3 715 aa2.94□□□□□ -1.94
CD46-213ENST00000471987 CEND1Q8N111 149 aa2.94□□□□□ -1.94
CD46-213ENST00000471987 TMCO5AQ8N6Q1 288 aa2.94□□□□□ -1.94
CD46-213ENST00000471987 C14orf178Q8N769 122 aaPredicted RBP2.94□□□□□ -1.94
CD46-213ENST00000471987 ZBTB44Q8NCP5 570 aa2.94□□□□□ -1.94
CD46-213ENST00000471987 KIAA0895Q8NCT3 520 aa2.94□□□□□ -1.94
CD46-213ENST00000471987 ANKRD20A12PQ8NF67 263 aa2.94□□□□□ -1.94
CD46-213ENST00000471987 OR52K1Q8NGK4 314 aa2.94□□□□□ -1.94
CD46-213ENST00000471987 ERMNQ8TAM6 284 aa2.94□□□□□ -1.94
CD46-213ENST00000471987 GDAP1Q8TB36 358 aa2.94□□□□□ -1.94
CD46-213ENST00000471987 FAM104AQ969W3 186 aa2.94□□□□□ -1.94
CD46-213ENST00000471987 PNPLA2Q96AD5 504 aa2.94□□□□□ -1.94
CD46-213ENST00000471987 SNRNP40Q96DI7 357 aaKnown RBP2.94□□□□□ -1.94
CD46-213ENST00000471987 PCED1BQ96HM7 432 aa2.94□□□□□ -1.94
CD46-213ENST00000471987 TECTBQ96PL2 329 aa2.94□□□□□ -1.94
CD46-213ENST00000471987 TMEM237Q96Q45 408 aa2.94□□□□□ -1.94
CD46-213ENST00000471987 KIR2DL4Q99706 377 aa2.94□□□□□ -1.94
CD46-213ENST00000471987 ST6GALNAC5Q9BVH7 336 aa2.94□□□□□ -1.94
CD46-213ENST00000471987 ACAT2Q9BWD1 397 aa2.94□□□□□ -1.94
CD46-213ENST00000471987 LRRC2Q9BYS8 371 aa2.94□□□□□ -1.94
CD46-213ENST00000471987 TNMDQ9H2S6 317 aa2.94□□□□□ -1.94
CD46-213ENST00000471987 VCX3BQ9H321 246 aa2.94□□□□□ -1.94
CD46-213ENST00000471987 RNF41Q9H4P4 317 aaPredicted RBP2.94□□□□□ -1.94
CD46-213ENST00000471987 TM9SF3Q9HD45 589 aa2.94□□□□□ -1.94
CD46-213ENST00000471987 AATFQ9NY61 560 aaKnown RBP eCLIP2.94□□□□□ -1.94
CD46-213ENST00000471987 PRODH2Q9UF12 536 aa2.94□□□□□ -1.94
CD46-213ENST00000471987 PTBP2Q9UKA9 531 aaKnown RBP2.94□□□□□ -1.94
CD46-213ENST00000471987 OR1A2Q9Y585 309 aa2.94□□□□□ -1.94
CD46-213ENST00000471987 AP1M2Q9Y6Q5 423 aa2.94□□□□□ -1.94
CD46-213ENST00000471987 NSD2O96028 1365 aa2.94□□□□□ -1.94
CD46-213ENST00000471987 MAP3K19Q56UN5 1328 aa2.93□□□□□ -1.94
CD46-213ENST00000471987 ATP6AP2A0A1C7CYW4 349 aa2.93□□□□□ -1.94
CD46-213ENST00000471987 FAM231BA6NCW3 169 aa2.93□□□□□ -1.94
CD46-213ENST00000471987 PDXKO00764 312 aa2.93□□□□□ -1.94
CD46-213ENST00000471987 SYT7O43581 403 aa2.93□□□□□ -1.94
CD46-213ENST00000471987 SPOPO43791 374 aa2.93□□□□□ -1.94
CD46-213ENST00000471987 PRPSAP2O60256 369 aa2.93□□□□□ -1.94
CD46-213ENST00000471987 ZNF861PO60384 105 aa2.93□□□□□ -1.94
CD46-213ENST00000471987 FMO6PO60774 539 aa2.93□□□□□ -1.94
CD46-213ENST00000471987 GOT2P00505 430 aaKnown RBP2.93□□□□□ -1.94
CD46-213ENST00000471987 GSTA2P09210 222 aa2.93□□□□□ -1.94
CD46-213ENST00000471987 ZNF41P51814 821 aaPredicted RBP2.93□□□□□ -1.94
CD46-213ENST00000471987 GTF2A1P52655 376 aaPredicted RBP2.93□□□□□ -1.94
CD46-213ENST00000471987 RIPPLY3P57055 190 aa2.93□□□□□ -1.94
CD46-213ENST00000471987 RBP5P82980 135 aa2.93□□□□□ -1.94
CD46-213ENST00000471987 BFSP1Q12934 665 aa2.93□□□□□ -1.94
CD46-213ENST00000471987 PDIA5Q14554 519 aa2.93□□□□□ -1.94
CD46-213ENST00000471987 MXD4Q14582 209 aaPredicted RBP2.93□□□□□ -1.94
CD46-213ENST00000471987 MEF2DQ14814 521 aa2.93□□□□□ -1.94
CD46-213ENST00000471987 RCN1Q15293 331 aa2.93□□□□□ -1.94
CD46-213ENST00000471987 C1orf141Q5JVX7 400 aa2.93□□□□□ -1.94
CD46-213ENST00000471987 ACER2Q5QJU3 275 aa2.93□□□□□ -1.94
CD46-213ENST00000471987 AADACL4Q5VUY2 407 aa2.93□□□□□ -1.94
CD46-213ENST00000471987 Q6P435 159 aa2.93□□□□□ -1.94
CD46-213ENST00000471987 CASC4Q6P4E1 433 aa2.93□□□□□ -1.94
CD46-213ENST00000471987 RGS9BPQ6ZS82 235 aa2.93□□□□□ -1.94
CD46-213ENST00000471987 BNIPLQ7Z465 357 aa2.93□□□□□ -1.94
CD46-213ENST00000471987 SPATA19Q7Z5L4 167 aa2.93□□□□□ -1.94
CD46-213ENST00000471987 SLC7A5P1Q8MH63 180 aa2.93□□□□□ -1.94
CD46-213ENST00000471987 BBOF1Q8ND07 529 aa2.93□□□□□ -1.94
CD46-213ENST00000471987 CDKL2Q92772 493 aa2.93□□□□□ -1.94
CD46-213ENST00000471987 CITED2Q99967 270 aaPredicted RBP2.93□□□□□ -1.94
CD46-213ENST00000471987 GAL3ST1Q99999 423 aa2.93□□□□□ -1.94
CD46-213ENST00000471987 UQCC2Q9BRT2 126 aa2.93□□□□□ -1.94
CD46-213ENST00000471987 TBCDQ9BTW9 1192 aa2.93□□□□□ -1.94
CD46-213ENST00000471987 C1orf21Q9H246 121 aa2.93□□□□□ -1.94
CD46-213ENST00000471987 EHD1Q9H4M9 534 aa2.93□□□□□ -1.94
CD46-213ENST00000471987 PARVGQ9HBI0 331 aa2.93□□□□□ -1.94
CD46-213ENST00000471987 CRLF2Q9HC73 371 aa2.93□□□□□ -1.94
CD46-213ENST00000471987 HOOK1Q9UJC3 728 aaKnown RBP2.93□□□□□ -1.94
CD46-213ENST00000471987 CCPG1Q9ULG6 757 aa2.93□□□□□ -1.94
CD46-213ENST00000471987 CHTOPQ9Y3Y2 248 aaKnown RBP2.93□□□□□ -1.94
CD46-213ENST00000471987 TTC21BQ7Z4L5 1316 aa2.93□□□□□ -1.94
CD46-213ENST00000471987 SMARCA2P51531 1590 aa2.92□□□□□ -1.94
CD46-213ENST00000471987 LRRIQ4A6NIV6 560 aa2.92□□□□□ -1.94
CD46-213ENST00000471987 TRIM49D1C9J1S8 452 aa2.92□□□□□ -1.94
CD46-213ENST00000471987 K7EPI3 171 aa2.92□□□□□ -1.94
CD46-213ENST00000471987 KERAO60938 352 aa2.92□□□□□ -1.94
CD46-213ENST00000471987 TPM1P09493 284 aa2.92□□□□□ -1.94
CD46-213ENST00000471987 ALOX5P09917 674 aa2.92□□□□□ -1.94
CD46-213ENST00000471987 IL10P22301 178 aa2.92□□□□□ -1.94
CD46-213ENST00000471987 NF2P35240 595 aa2.92□□□□□ -1.94
CD46-213ENST00000471987 RWDD2BP57060 319 aa2.92□□□□□ -1.94
CD46-213ENST00000471987 HTD2P86397 168 aa2.92□□□□□ -1.94
CD46-213ENST00000471987 BEX3Q00994 111 aa2.92□□□□□ -1.94
CD46-213ENST00000471987 C2orf76Q3KRA6 126 aa2.92□□□□□ -1.94
CD46-213ENST00000471987 KBTBD12Q3ZCT8 623 aa2.92□□□□□ -1.94
CD46-213ENST00000471987 CFAP221Q4G0U5 840 aa2.92□□□□□ -1.94
CD46-213ENST00000471987 DCAF12Q5T6F0 453 aa2.92□□□□□ -1.94
CD46-213ENST00000471987 OTPQ5XKR4 325 aa2.92□□□□□ -1.94
CD46-213ENST00000471987 OLFM4Q6UX06 510 aa2.92□□□□□ -1.94
CD46-213ENST00000471987 ZNF677Q86XU0 584 aa2.92□□□□□ -1.94
CD46-213ENST00000471987 CCDC83Q8IWF9 413 aa2.92□□□□□ -1.94
CD46-213ENST00000471987 PDCL2Q8N4E4 241 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms