RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 RPP25Q9BUL9 199 aaKnown RBP9.99□□□□□ -0.81
APLF-204ENST00000471727 TAPBPLQ9BX59 468 aa9.99□□□□□ -0.81
APLF-204ENST00000471727 TSSK6Q9BXA6 273 aa9.99□□□□□ -0.81
APLF-204ENST00000471727 RSPO3Q9BXY4 272 aaPredicted RBP9.99□□□□□ -0.81
APLF-204ENST00000471727 SLC38A1Q9H2H9 487 aa9.99□□□□□ -0.81
APLF-204ENST00000471727 LYRM4Q9HD34 91 aa9.99□□□□□ -0.81
APLF-204ENST00000471727 ISYNA1Q9NPH2 558 aa9.99□□□□□ -0.81
APLF-204ENST00000471727 MAN2C1Q9NTJ4 1040 aa9.99□□□□□ -0.81
APLF-204ENST00000471727 CHCHD3Q9NX63 227 aaKnown RBP9.99□□□□□ -0.81
APLF-204ENST00000471727 ZNF624Q9P2J8 865 aaPredicted RBP9.99□□□□□ -0.81
APLF-204ENST00000471727 DIMT1Q9UNQ2 313 aaKnown RBP9.99□□□□□ -0.81
APLF-204ENST00000471727 A0A075B6Q4 140 aa9.98□□□□□ -0.81
APLF-204ENST00000471727 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.98□□□□□ -0.81
APLF-204ENST00000471727 POM121BA6NF01 834 aa9.98□□□□□ -0.81
APLF-204ENST00000471727 AGAP5A6NIR3 686 aa9.98□□□□□ -0.81
APLF-204ENST00000471727 BTN3A3O00478 584 aa9.98□□□□□ -0.81
APLF-204ENST00000471727 SNX4O95219 450 aa9.98□□□□□ -0.81
APLF-204ENST00000471727 OR5F1O95221 314 aa9.98□□□□□ -0.81
APLF-204ENST00000471727 TP53P04637 393 aaPredicted RBP9.98□□□□□ -0.81
APLF-204ENST00000471727 CCNYL3P0C7X3 344 aa9.98□□□□□ -0.81
APLF-204ENST00000471727 HSMCR30P0CW71 290 aa9.98□□□□□ -0.81
APLF-204ENST00000471727 DBTP11182 482 aaKnown RBP9.98□□□□□ -0.81
APLF-204ENST00000471727 TNNI3P19429 210 aa9.98□□□□□ -0.81
APLF-204ENST00000471727 COL9A1P20849 921 aa9.98□□□□□ -0.81
APLF-204ENST00000471727 PSMA1P25786 263 aaKnown RBP9.98□□□□□ -0.81
APLF-204ENST00000471727 ETV6P41212 452 aa9.98□□□□□ -0.81
APLF-204ENST00000471727 MC3RP41968 323 aa9.98□□□□□ -0.81
APLF-204ENST00000471727 ACTR1BP42025 376 aa9.98□□□□□ -0.81
APLF-204ENST00000471727 ACTR1AP61163 376 aa9.98□□□□□ -0.81
APLF-204ENST00000471727 PPP2CBP62714 309 aa9.98□□□□□ -0.81
APLF-204ENST00000471727 PPP2CAP67775 309 aa9.98□□□□□ -0.81
APLF-204ENST00000471727 EFNB1P98172 346 aa9.98□□□□□ -0.81
APLF-204ENST00000471727 FUT5Q11128 374 aa9.98□□□□□ -0.81
APLF-204ENST00000471727 MLLT11Q13015 90 aaPredicted RBP9.98□□□□□ -0.81
APLF-204ENST00000471727 ATP1A4Q13733 1029 aa9.98□□□□□ -0.81
APLF-204ENST00000471727 LARS2Q15031 903 aaKnown RBP9.98□□□□□ -0.81
APLF-204ENST00000471727 SPHARQ15513 63 aa9.98□□□□□ -0.81
APLF-204ENST00000471727 DECR1Q16698 335 aa9.98□□□□□ -0.81
APLF-204ENST00000471727 TSTQ16762 297 aaKnown RBP9.98□□□□□ -0.81
APLF-204ENST00000471727 EIPR1Q53HC9 387 aa9.98□□□□□ -0.81
APLF-204ENST00000471727 FBXO42Q6P3S6 717 aa9.98□□□□□ -0.81
APLF-204ENST00000471727 FIGLAQ6QHK4 219 aa9.98□□□□□ -0.81
APLF-204ENST00000471727 IQCHQ86VS3 1027 aa9.98□□□□□ -0.81
APLF-204ENST00000471727 PEX5LQ8IYB4 626 aa9.98□□□□□ -0.81
APLF-204ENST00000471727 NANOGP1Q8N7R0 232 aa9.98□□□□□ -0.81
APLF-204ENST00000471727 TCEANCQ8N8B7 351 aa9.98□□□□□ -0.81
APLF-204ENST00000471727 OR9A2Q8NGT5 310 aa9.98□□□□□ -0.81
APLF-204ENST00000471727 PIGXQ8TBF5 258 aa9.98□□□□□ -0.81
APLF-204ENST00000471727 TEX47Q8TBZ9 253 aa9.98□□□□□ -0.81
APLF-204ENST00000471727 GIMAP5Q96F15 307 aa9.98□□□□□ -0.81
APLF-204ENST00000471727 BMFQ96LC9 184 aa9.98□□□□□ -0.81
APLF-204ENST00000471727 C10orf90Q96M02 699 aa9.98□□□□□ -0.81
APLF-204ENST00000471727 OR2A5Q96R48 311 aa9.98□□□□□ -0.81
APLF-204ENST00000471727 IL4I1Q96RQ9 567 aa9.98□□□□□ -0.81
APLF-204ENST00000471727 ALOXE3Q9BYJ1 711 aa9.98□□□□□ -0.81
APLF-204ENST00000471727 SP140LQ9H930 580 aa9.98□□□□□ -0.81
APLF-204ENST00000471727 ZBTB20Q9HC78 741 aaPredicted RBP9.98□□□□□ -0.81
APLF-204ENST00000471727 MED17Q9NVC6 651 aa9.98□□□□□ -0.81
APLF-204ENST00000471727 TVP23BQ9NYZ1 205 aa9.98□□□□□ -0.81
APLF-204ENST00000471727 KLHL3Q9UH77 587 aa9.98□□□□□ -0.81
APLF-204ENST00000471727 A0A087WV62 115 aa9.97□□□□□ -0.81
APLF-204ENST00000471727 A6NCN8 305 aa9.97□□□□□ -0.81
APLF-204ENST00000471727 FAM227AF5H4B4 570 aa9.97□□□□□ -0.81
APLF-204ENST00000471727 LOC110117498-PIK3R3F6TDL0 507 aa9.97□□□□□ -0.81
APLF-204ENST00000471727 ARHGAP33O14559 1287 aa9.97□□□□□ -0.81
APLF-204ENST00000471727 MYL12BO14950 172 aa9.97□□□□□ -0.81
APLF-204ENST00000471727 SOX14O95416 240 aa9.97□□□□□ -0.81
APLF-204ENST00000471727 RAB36O95755 333 aa9.97□□□□□ -0.81
APLF-204ENST00000471727 EPPINO95925 133 aa9.97□□□□□ -0.81
APLF-204ENST00000471727 AK1P00568 194 aa9.97□□□□□ -0.81
APLF-204ENST00000471727 EGFP01133 1207 aa9.97□□□□□ -0.81
APLF-204ENST00000471727 THBS1P07996 1170 aa9.97□□□□□ -0.81
APLF-204ENST00000471727 ZNF888P0CJ79 500 aaPredicted RBP9.97□□□□□ -0.81
APLF-204ENST00000471727 C8orf89P0DMQ9 161 aa9.97□□□□□ -0.81
APLF-204ENST00000471727 FUT4P22083 530 aa9.97□□□□□ -0.81
APLF-204ENST00000471727 SRP54P61011 504 aaKnown RBP9.97□□□□□ -0.81
APLF-204ENST00000471727 CHRNEQ04844 493 aa9.97□□□□□ -0.81
APLF-204ENST00000471727 ZNF91Q05481 1191 aa9.97□□□□□ -0.81
APLF-204ENST00000471727 RAB40BQ12829 278 aa9.97□□□□□ -0.81
APLF-204ENST00000471727 ILF3Q12906 894 aaKnown RBP eCLIP9.97□□□□□ -0.81
APLF-204ENST00000471727 HTR4Q13639 388 aa9.97□□□□□ -0.81
APLF-204ENST00000471727 ARHGAP11BQ3KRB8 267 aa9.97□□□□□ -0.81
APLF-204ENST00000471727 PRRT3Q5FWE3 981 aa9.97□□□□□ -0.81
APLF-204ENST00000471727 C3orf38Q5JPI3 329 aa9.97□□□□□ -0.81
APLF-204ENST00000471727 TPRG1LQ5T0D9 272 aa9.97□□□□□ -0.81
APLF-204ENST00000471727 MFSD12Q6NUT3 480 aa9.97□□□□□ -0.81
APLF-204ENST00000471727 SLC27A4Q6P1M0 643 aa9.97□□□□□ -0.81
APLF-204ENST00000471727 ATCAYQ86WG3 371 aa9.97□□□□□ -0.81
APLF-204ENST00000471727 TRIM48Q8IWZ4 208 aa9.97□□□□□ -0.81
APLF-204ENST00000471727 FAM20CQ8IXL6 584 aa9.97□□□□□ -0.81
APLF-204ENST00000471727 NLGN4XQ8N0W4 816 aa9.97□□□□□ -0.81
APLF-204ENST00000471727 SLC34A3Q8N130 599 aa9.97□□□□□ -0.81
APLF-204ENST00000471727 OR2L13Q8N349 312 aa9.97□□□□□ -0.81
APLF-204ENST00000471727 OR52P1PQ8NH57 321 aa9.97□□□□□ -0.81
APLF-204ENST00000471727 TMEM163Q8TC26 289 aa9.97□□□□□ -0.81
APLF-204ENST00000471727 ACOT11Q8WXI4 607 aaPredicted RBP9.97□□□□□ -0.81
APLF-204ENST00000471727 PIK3R3Q92569 461 aa9.97□□□□□ -0.81
APLF-204ENST00000471727 OSTF1Q92882 214 aa9.97□□□□□ -0.81
APLF-204ENST00000471727 C16orf58Q96GQ5 468 aa9.97□□□□□ -0.81
APLF-204ENST00000471727 MRGPRX1Q96LB2 322 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms